EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPCAG00000013740 (Gene tree)
Gene ID
-
Gene Symbol
LSM5
Alias
YER146W
Full Name
LSM5 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Procavia_capensis
Status
putative
Strand
Minus strand
Length
2986 bases
Position
chrscaffold_54509:5637-8622
Accession
17162
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPCAP00000012816LSMPF01423.221.2e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPCAT00000013709LSM5-201246-ENSPCAP0000001281681 (aa)-UPI00018AD36D
Gene Model
Click here to download ENSPCAG00000013740's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000013740's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPCAG00000013740LSM5100100.000ENSG00000106355LSM589100.000Homo_sapiens
ENSPCAG00000013740LSM510096.296ENSAPOG00000011743LSM59196.296Acanthochromis_polyacanthus
ENSPCAG00000013740LSM510096.296ENSAPOG00000020779LSM59596.296Acanthochromis_polyacanthus
ENSPCAG00000013740LSM5100100.000ENSAMEG00000006700LSM589100.000Ailuropoda_melanoleuca
ENSPCAG00000013740LSM59554.545ENSACIG00000019185lsm58054.545Amphilophus_citrinellus
ENSPCAG00000013740LSM510096.296ENSAOCG00000001636lsm58996.296Amphiprion_ocellaris
ENSPCAG00000013740LSM510096.296ENSAPEG00000008151lsm58996.296Amphiprion_percula
ENSPCAG00000013740LSM56498.077ENSAPEG00000008201lsm58498.077Amphiprion_percula
ENSPCAG00000013740LSM510095.062ENSATEG00000020470lsm56095.062Anabas_testudineus
ENSPCAG00000013740LSM581100.000ENSAPLG00000008171LSM589100.000Anas_platyrhynchos
ENSPCAG00000013740LSM569100.000ENSACAG00000009530LSM593100.000Anolis_carolinensis
ENSPCAG00000013740LSM510077.778ENSANAG00000037758-8777.778Aotus_nancymaae
ENSPCAG00000013740LSM510098.765ENSANAG00000034409-8998.765Aotus_nancymaae
ENSPCAG00000013740LSM59995.000ENSANAG00000024192-8395.000Aotus_nancymaae
ENSPCAG00000013740LSM59596.104ENSACLG00000012891lsm58896.104Astatotilapia_calliptera
ENSPCAG00000013740LSM510080.952ENSAMXG00000035543lsm58980.952Astyanax_mexicanus
ENSPCAG00000013740LSM55981.250ENSBTAG00000052014-6381.250Bos_taurus
ENSPCAG00000013740LSM5100100.000ENSBTAG00000002332LSM589100.000Bos_taurus
ENSPCAG00000013740LSM510071.605WBGene00003079lsm-58971.605Caenorhabditis_elegans
ENSPCAG00000013740LSM5100100.000ENSCJAG00000047379LSM58192.308Callithrix_jacchus
ENSPCAG00000013740LSM59986.250ENSCJAG00000005678-9086.250Callithrix_jacchus
ENSPCAG00000013740LSM56294.000ENSCAFG00000030781-5894.000Canis_familiaris
ENSPCAG00000013740LSM599100.000ENSCAFG00000019261-88100.000Canis_familiaris
ENSPCAG00000013740LSM5100100.000ENSCAFG00020004946LSM589100.000Canis_lupus_dingo
ENSPCAG00000013740LSM59175.676ENSCHIG00000021428-8976.923Capra_hircus
ENSPCAG00000013740LSM5100100.000ENSCHIG00000024539LSM589100.000Capra_hircus
ENSPCAG00000013740LSM510097.531ENSCHIG00000004079-8997.531Capra_hircus
ENSPCAG00000013740LSM510085.185ENSTSYG00000028728-8885.185Carlito_syrichta
ENSPCAG00000013740LSM510074.074ENSTSYG00000036637-8674.074Carlito_syrichta
ENSPCAG00000013740LSM5100100.000ENSTSYG00000006449-89100.000Carlito_syrichta
ENSPCAG00000013740LSM510079.012ENSTSYG00000026530-8079.012Carlito_syrichta
ENSPCAG00000013740LSM580100.000ENSCAPG00000006980LSM587100.000Cavia_aperea
ENSPCAG00000013740LSM5100100.000ENSCPOG00000036386LSM589100.000Cavia_porcellus
ENSPCAG00000013740LSM5100100.000ENSCCAG00000037808-89100.000Cebus_capucinus
ENSPCAG00000013740LSM510065.432ENSCCAG00000037334-8765.432Cebus_capucinus
ENSPCAG00000013740LSM510098.765ENSCCAG00000000821-8998.765Cebus_capucinus
ENSPCAG00000013740LSM510097.531ENSCCAG00000032123-8997.531Cebus_capucinus
ENSPCAG00000013740LSM510079.012ENSCCAG00000032792-8779.012Cebus_capucinus
ENSPCAG00000013740LSM5100100.000ENSCATG00000040218LSM589100.000Cercocebus_atys
ENSPCAG00000013740LSM59988.750ENSCATG00000014790-9598.182Cercocebus_atys
ENSPCAG00000013740LSM510081.481ENSCLAG00000005062-8081.481Chinchilla_lanigera
ENSPCAG00000013740LSM5100100.000ENSCLAG00000000202LSM589100.000Chinchilla_lanigera
ENSPCAG00000013740LSM593100.000ENSCHOG00000005335LSM599100.000Choloepus_hoffmanni
ENSPCAG00000013740LSM5100100.000ENSCPBG00000013685LSM589100.000Chrysemys_picta_bellii
ENSPCAG00000013740LSM59888.608ENSCING00000020625-8888.608Ciona_intestinalis
ENSPCAG00000013740LSM59488.158ENSCSAVG00000001439-8688.158Ciona_savignyi
ENSPCAG00000013740LSM5100100.000ENSCANG00000039909LSM589100.000Colobus_angolensis_palliatus
ENSPCAG00000013740LSM5100100.000ENSCGRG00001015461Lsm589100.000Cricetulus_griseus_chok1gshd
ENSPCAG00000013740LSM580100.000ENSCGRG00000007677Lsm587100.000Cricetulus_griseus_crigri
ENSPCAG00000013740LSM510055.556ENSCSEG00000015286lsm58355.556Cynoglossus_semilaevis
ENSPCAG00000013740LSM510095.062ENSCVAG00000004262lsm58995.062Cyprinodon_variegatus
ENSPCAG00000013740LSM510095.062ENSDARG00000071573lsm58995.062Danio_rerio
ENSPCAG00000013740LSM510088.889ENSDNOG00000049495-8988.889Dasypus_novemcinctus
ENSPCAG00000013740LSM5100100.000ENSDNOG00000034958LSM591100.000Dasypus_novemcinctus
ENSPCAG00000013740LSM5100100.000ENSDORG00000009422Lsm589100.000Dipodomys_ordii
ENSPCAG00000013740LSM59980.000FBgn0035675CG66108880.000Drosophila_melanogaster
ENSPCAG00000013740LSM510076.543ENSETEG00000010651-8776.543Echinops_telfairi
ENSPCAG00000013740LSM59973.750ENSETEG00000001469-8673.750Echinops_telfairi
ENSPCAG00000013740LSM59868.354ENSETEG00000000777-9068.354Echinops_telfairi
ENSPCAG00000013740LSM57879.365ENSETEG00000016074-8179.365Echinops_telfairi
ENSPCAG00000013740LSM5100100.000ENSETEG00000018068LSM589100.000Echinops_telfairi
ENSPCAG00000013740LSM510092.593ENSEBUG00000008540lsm58992.593Eptatretus_burgeri
ENSPCAG00000013740LSM5100100.000ENSEASG00005003500LSM589100.000Equus_asinus_asinus
ENSPCAG00000013740LSM510083.951ENSECAG00000018445LSM58883.951Equus_caballus
ENSPCAG00000013740LSM55993.750ENSEEUG00000004102LSM58093.750Erinaceus_europaeus
ENSPCAG00000013740LSM510095.062ENSELUG00000007792lsm58995.062Esox_lucius
ENSPCAG00000013740LSM5100100.000ENSFCAG00000000230LSM589100.000Felis_catus
ENSPCAG00000013740LSM581100.000ENSFALG00000001892LSM580100.000Ficedula_albicollis
ENSPCAG00000013740LSM5100100.000ENSFDAG00000008767LSM589100.000Fukomys_damarensis
ENSPCAG00000013740LSM510067.901ENSFDAG00000008685-8867.901Fukomys_damarensis
ENSPCAG00000013740LSM59975.000ENSFHEG00000004011lsm58079.730Fundulus_heteroclitus
ENSPCAG00000013740LSM510095.062ENSGMOG00000018235lsm59095.062Gadus_morhua
ENSPCAG00000013740LSM510098.765ENSGALG00000041625LSM58998.765Gallus_gallus
ENSPCAG00000013740LSM56498.077ENSGAFG00000016824lsm58498.077Gambusia_affinis
ENSPCAG00000013740LSM510096.296ENSGACG00000005528lsm58996.296Gasterosteus_aculeatus
ENSPCAG00000013740LSM5100100.000ENSGAGG00000015593LSM589100.000Gopherus_agassizii
ENSPCAG00000013740LSM5100100.000ENSGGOG00000043469LSM589100.000Gorilla_gorilla
ENSPCAG00000013740LSM59596.104ENSHBUG00000013773lsm58896.104Haplochromis_burtoni
ENSPCAG00000013740LSM5100100.000ENSHGLG00000011765LSM589100.000Heterocephalus_glaber_female
ENSPCAG00000013740LSM510096.296ENSHGLG00100015610LSM58996.296Heterocephalus_glaber_male
ENSPCAG00000013740LSM510055.556ENSHCOG00000008288lsm58355.556Hippocampus_comes
ENSPCAG00000013740LSM510093.827ENSIPUG00000021095LSM58993.827Ictalurus_punctatus
ENSPCAG00000013740LSM5100100.000ENSSTOG00000012662LSM589100.000Ictidomys_tridecemlineatus
ENSPCAG00000013740LSM59182.895ENSSTOG00000033886-8582.895Ictidomys_tridecemlineatus
ENSPCAG00000013740LSM510071.605ENSJJAG00000016144-8071.605Jaculus_jaculus
ENSPCAG00000013740LSM59891.139ENSJJAG00000004475-10091.139Jaculus_jaculus
ENSPCAG00000013740LSM510097.531ENSJJAG00000012145-8997.531Jaculus_jaculus
ENSPCAG00000013740LSM510095.062ENSKMAG00000021861lsm58995.062Kryptolebias_marmoratus
ENSPCAG00000013740LSM510095.062ENSLBEG00000009235LSM56495.062Labrus_bergylta
ENSPCAG00000013740LSM56980.357ENSLBEG00000017379lsm59280.357Labrus_bergylta
ENSPCAG00000013740LSM510097.531ENSLACG00000022448LSM58997.531Latimeria_chalumnae
ENSPCAG00000013740LSM510095.062ENSLOCG00000012903lsm58995.062Lepisosteus_oculatus
ENSPCAG00000013740LSM510069.136ENSLAFG00000027938-8769.136Loxodonta_africana
ENSPCAG00000013740LSM5100100.000ENSLAFG00000029579LSM589100.000Loxodonta_africana
ENSPCAG00000013740LSM510096.296ENSMFAG00000030152-8996.296Macaca_fascicularis
ENSPCAG00000013740LSM5100100.000ENSMFAG00000038508LSM589100.000Macaca_fascicularis
ENSPCAG00000013740LSM55997.917ENSMFAG00000031187-8197.917Macaca_fascicularis
ENSPCAG00000013740LSM56492.308ENSMMUG00000045129-8192.308Macaca_mulatta
ENSPCAG00000013740LSM510096.296ENSMMUG00000030131-8996.296Macaca_mulatta
ENSPCAG00000013740LSM59988.750ENSMMUG00000039822-8888.750Macaca_mulatta
ENSPCAG00000013740LSM5100100.000ENSMNEG00000015331LSM589100.000Macaca_nemestrina
ENSPCAG00000013740LSM510096.296ENSMNEG00000037935-8996.296Macaca_nemestrina
ENSPCAG00000013740LSM59887.342ENSMLEG00000034037-8887.342Mandrillus_leucophaeus
ENSPCAG00000013740LSM5100100.000ENSMLEG00000024945LSM589100.000Mandrillus_leucophaeus
ENSPCAG00000013740LSM510091.358ENSMAMG00000012869lsm58991.358Mastacembelus_armatus
ENSPCAG00000013740LSM59596.104ENSMZEG00005019554lsm58896.104Maylandia_zebra
ENSPCAG00000013740LSM510098.765ENSMGAG00000012117LSM58998.765Meleagris_gallopavo
ENSPCAG00000013740LSM5100100.000ENSMAUG00000012222Lsm589100.000Mesocricetus_auratus
ENSPCAG00000013740LSM510098.765ENSMAUG00000008132-8998.765Mesocricetus_auratus
ENSPCAG00000013740LSM5100100.000ENSMICG00000005353LSM589100.000Microcebus_murinus
ENSPCAG00000013740LSM59975.000ENSMICG00000033928-8375.000Microcebus_murinus
ENSPCAG00000013740LSM5100100.000ENSMOCG00000012018Lsm589100.000Microtus_ochrogaster
ENSPCAG00000013740LSM58198.485ENSMMOG00000004026lsm57698.485Mola_mola
ENSPCAG00000013740LSM564100.000ENSMODG00000013274-84100.000Monodelphis_domestica
ENSPCAG00000013740LSM56494.231ENSMALG00000010343lsm58494.231Monopterus_albus
ENSPCAG00000013740LSM5100100.000MGP_CAROLIEiJ_G0028421Lsm5100100.000Mus_caroli
ENSPCAG00000013740LSM5100100.000ENSMUSG00000091625Lsm5100100.000Mus_musculus
ENSPCAG00000013740LSM5100100.000MGP_PahariEiJ_G0022171Lsm5100100.000Mus_pahari
ENSPCAG00000013740LSM5100100.000MGP_SPRETEiJ_G0029423Lsm5100100.000Mus_spretus
ENSPCAG00000013740LSM5100100.000ENSMLUG00000017028LSM589100.000Myotis_lucifugus
ENSPCAG00000013740LSM5100100.000ENSNGAG00000024142Lsm589100.000Nannospalax_galili
ENSPCAG00000013740LSM59977.500ENSNGAG00000022569-8477.500Nannospalax_galili
ENSPCAG00000013740LSM510085.542ENSNGAG00000017707-8985.542Nannospalax_galili
ENSPCAG00000013740LSM55688.889ENSNBRG00000009964LSM59688.889Neolamprologus_brichardi
ENSPCAG00000013740LSM55897.872ENSNBRG00000011386lsm56397.872Neolamprologus_brichardi
ENSPCAG00000013740LSM5100100.000ENSNLEG00000015268LSM589100.000Nomascus_leucogenys
ENSPCAG00000013740LSM580100.000ENSOPRG00000002443LSM587100.000Ochotona_princeps
ENSPCAG00000013740LSM5100100.000ENSODEG00000008258-89100.000Octodon_degus
ENSPCAG00000013740LSM5100100.000ENSODEG00000019072-89100.000Octodon_degus
ENSPCAG00000013740LSM58559.420ENSOANG00000014540-9259.420Ornithorhynchus_anatinus
ENSPCAG00000013740LSM5100100.000ENSOCUG00000029043LSM589100.000Oryctolagus_cuniculus
ENSPCAG00000013740LSM510095.062ENSORLG00000027725lsm55295.062Oryzias_latipes
ENSPCAG00000013740LSM510095.062ENSORLG00020003019lsm58095.062Oryzias_latipes_hni
ENSPCAG00000013740LSM510095.062ENSORLG00015003338lsm58995.062Oryzias_latipes_hsok
ENSPCAG00000013740LSM510093.827ENSOMEG00000001078lsm58993.827Oryzias_melastigma
ENSPCAG00000013740LSM5100100.000ENSOGAG00000013892LSM589100.000Otolemur_garnettii
ENSPCAG00000013740LSM5100100.000ENSOARG00000006944LSM589100.000Ovis_aries
ENSPCAG00000013740LSM5100100.000ENSPPAG00000003697-89100.000Pan_paniscus
ENSPCAG00000013740LSM5100100.000ENSPPRG00000002550LSM589100.000Panthera_pardus
ENSPCAG00000013740LSM5100100.000ENSPTIG00000015604LSM589100.000Panthera_tigris_altaica
ENSPCAG00000013740LSM5100100.000ENSPTRG00000019057LSM589100.000Pan_troglodytes
ENSPCAG00000013740LSM510081.481ENSPTRG00000049488-8983.951Pan_troglodytes
ENSPCAG00000013740LSM5100100.000ENSPANG00000032179-89100.000Papio_anubis
ENSPCAG00000013740LSM59988.750ENSPANG00000032538-8888.750Papio_anubis
ENSPCAG00000013740LSM510095.062ENSPANG00000033477-8995.062Papio_anubis
ENSPCAG00000013740LSM510095.062ENSPKIG00000011910lsm58995.062Paramormyrops_kingsleyae
ENSPCAG00000013740LSM581100.000ENSPSIG00000014796LSM589100.000Pelodiscus_sinensis
ENSPCAG00000013740LSM56498.077ENSPMGG00000011699lsm58498.077Periophthalmus_magnuspinnatus
ENSPCAG00000013740LSM558100.000ENSPEMG00000019994-80100.000Peromyscus_maniculatus_bairdii
ENSPCAG00000013740LSM510071.605ENSPEMG00000022375-8871.605Peromyscus_maniculatus_bairdii
ENSPCAG00000013740LSM510095.062ENSPFOG00000001433lsm58995.062Poecilia_formosa
ENSPCAG00000013740LSM510095.062ENSPLAG00000009665lsm58995.062Poecilia_latipinna
ENSPCAG00000013740LSM510095.062ENSPMEG00000022265lsm58995.062Poecilia_mexicana
ENSPCAG00000013740LSM56498.077ENSPREG00000022452lsm58498.077Poecilia_reticulata
ENSPCAG00000013740LSM510096.296ENSPPYG00000017661LSM58996.296Pongo_abelii
ENSPCAG00000013740LSM5100100.000ENSPVAG00000009786LSM589100.000Pteropus_vampyrus
ENSPCAG00000013740LSM59596.104ENSPNYG00000022236lsm58896.104Pundamilia_nyererei
ENSPCAG00000013740LSM510093.827ENSPNAG00000001887lsm58993.827Pygocentrus_nattereri
ENSPCAG00000013740LSM510095.122ENSRNOG00000027305AABR07065089.18995.122Rattus_norvegicus
ENSPCAG00000013740LSM5100100.000ENSRNOG00000042126Lsm589100.000Rattus_norvegicus
ENSPCAG00000013740LSM5100100.000ENSRBIG00000027803-89100.000Rhinopithecus_bieti
ENSPCAG00000013740LSM510098.765ENSRBIG00000024431-8998.765Rhinopithecus_bieti
ENSPCAG00000013740LSM5100100.000ENSRBIG00000030714-89100.000Rhinopithecus_bieti
ENSPCAG00000013740LSM5100100.000ENSRBIG00000030340-89100.000Rhinopithecus_bieti
ENSPCAG00000013740LSM5100100.000ENSRROG00000004655-89100.000Rhinopithecus_roxellana
ENSPCAG00000013740LSM5100100.000ENSRROG00000042782-89100.000Rhinopithecus_roxellana
ENSPCAG00000013740LSM5100100.000ENSRROG00000023884-89100.000Rhinopithecus_roxellana
ENSPCAG00000013740LSM58848.684YER146W-8248.684Saccharomyces_cerevisiae
ENSPCAG00000013740LSM510075.309ENSSBOG00000034794-8775.309Saimiri_boliviensis_boliviensis
ENSPCAG00000013740LSM5100100.000ENSSBOG00000012312LSM589100.000Saimiri_boliviensis_boliviensis
ENSPCAG00000013740LSM510098.765ENSSBOG00000019124-8998.765Saimiri_boliviensis_boliviensis
ENSPCAG00000013740LSM510095.062ENSSFOG00015010099lsm58995.062Scleropages_formosus
ENSPCAG00000013740LSM510056.790ENSSMAG00000007895lsm58356.790Scophthalmus_maximus
ENSPCAG00000013740LSM56498.077ENSSDUG00000010762lsm58498.077Seriola_dumerili
ENSPCAG00000013740LSM58977.778ENSSLDG00000008014-8677.778Seriola_lalandi_dorsalis
ENSPCAG00000013740LSM510095.062ENSSLDG00000025242lsm58995.062Seriola_lalandi_dorsalis
ENSPCAG00000013740LSM56998.214ENSSARG00000003330LSM56298.214Sorex_araneus
ENSPCAG00000013740LSM510097.531ENSSPUG00000002690LSM58997.531Sphenodon_punctatus
ENSPCAG00000013740LSM510056.790ENSSPAG00000005435lsm58356.790Stegastes_partitus
ENSPCAG00000013740LSM58588.406ENSSSCG00000029661-9688.406Sus_scrofa
ENSPCAG00000013740LSM5100100.000ENSSSCG00000026064-89100.000Sus_scrofa
ENSPCAG00000013740LSM510096.296ENSTGUG00000017539LSM58996.296Taeniopygia_guttata
ENSPCAG00000013740LSM59589.024ENSTRUG00000017749lsm56489.024Takifugu_rubripes
ENSPCAG00000013740LSM59596.104ENSTNIG00000008695lsm58896.104Tetraodon_nigroviridis
ENSPCAG00000013740LSM5100100.000ENSTBEG00000004876LSM589100.000Tupaia_belangeri
ENSPCAG00000013740LSM5100100.000ENSTTRG00000004237LSM589100.000Tursiops_truncatus
ENSPCAG00000013740LSM56492.308ENSUAMG00000009786LSM56892.308Ursus_americanus
ENSPCAG00000013740LSM5100100.000ENSUMAG00000002625LSM558100.000Ursus_maritimus
ENSPCAG00000013740LSM5100100.000ENSVPAG00000009985LSM589100.000Vicugna_pacos
ENSPCAG00000013740LSM5100100.000ENSVVUG00000021311LSM589100.000Vulpes_vulpes
ENSPCAG00000013740LSM510096.296ENSXETG00000026465lsm59996.296Xenopus_tropicalis
ENSPCAG00000013740LSM56498.077ENSXCOG00000015348lsm58498.077Xiphophorus_couchianus
ENSPCAG00000013740LSM510095.062ENSXMAG00000029988lsm58995.062Xiphophorus_maculatus

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