EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000014001 (Gene tree)
Gene ID: -
Gene Symbol: ZNF408
Alias: FLJ12827
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 5126 bases
Position: chrGeneScaffold_6196:54507-59632
Accession: 20041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000013053	zf-C2H2	PF00096.26	1.3e-40	1	8
ENSPCAP00000013053	zf-C2H2	PF00096.26	1.3e-40	2	8
ENSPCAP00000013053	zf-C2H2	PF00096.26	1.3e-40	3	8
ENSPCAP00000013053	zf-C2H2	PF00096.26	1.3e-40	4	8
ENSPCAP00000013053	zf-C2H2	PF00096.26	1.3e-40	5	8
ENSPCAP00000013053	zf-C2H2	PF00096.26	1.3e-40	6	8
ENSPCAP00000013053	zf-C2H2	PF00096.26	1.3e-40	7	8
ENSPCAP00000013053	zf-C2H2	PF00096.26	1.3e-40	8	8
ENSPCAP00000013053	zf-met	PF12874.7	9.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000013969	ZNF408-201	2151	-	ENSPCAP00000013053	716 (aa)	-	UPI00018AE870

Gene Model

Click here to download ENSPCAG00000014001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000014001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000014001	ZNF408	56	37.500	ENSPCAG00000011671	PRDM5	73	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000014001	ZNF408	99	75.634	ENSG00000175213	ZNF408	100	75.694	Homo_sapiens
ENSPCAG00000014001	ZNF408	100	74.724	ENSAMEG00000006904	ZNF408	100	74.862	Ailuropoda_melanoleuca
ENSPCAG00000014001	ZNF408	98	71.348	ENSANAG00000036294	ZNF408	93	78.560	Aotus_nancymaae
ENSPCAG00000014001	ZNF408	51	53.283	ENSAMXG00000032642	znf408	66	52.525	Astyanax_mexicanus
ENSPCAG00000014001	ZNF408	98	75.847	ENSCJAG00000019859	ZNF408	100	75.556	Callithrix_jacchus
ENSPCAG00000014001	ZNF408	100	75.857	ENSCAFG00000009143	ZNF408	97	75.857	Canis_familiaris
ENSPCAG00000014001	ZNF408	100	75.720	ENSCAFG00020019155	ZNF408	97	75.720	Canis_lupus_dingo
ENSPCAG00000014001	ZNF408	82	73.658	ENSCHIG00000025346	ZNF408	97	73.826	Capra_hircus
ENSPCAG00000014001	ZNF408	100	71.488	ENSTSYG00000025443	ZNF408	100	71.071	Carlito_syrichta
ENSPCAG00000014001	ZNF408	99	75.706	ENSCCAG00000029472	ZNF408	100	75.487	Cebus_capucinus
ENSPCAG00000014001	ZNF408	56	96.907	ENSCHOG00000009909	ZNF408	75	96.907	Choloepus_hoffmanni
ENSPCAG00000014001	ZNF408	100	67.222	ENSCGRG00001023588	Zfp408	100	66.944	Cricetulus_griseus_chok1gshd
ENSPCAG00000014001	ZNF408	100	67.222	ENSCGRG00000017618	Zfp408	100	66.944	Cricetulus_griseus_crigri
ENSPCAG00000014001	ZNF408	100	73.823	ENSDNOG00000047669	ZNF408	100	73.517	Dasypus_novemcinctus
ENSPCAG00000014001	ZNF408	99	66.385	ENSDORG00000000387	Zfp408	99	66.385	Dipodomys_ordii
ENSPCAG00000014001	ZNF408	88	62.857	ENSETEG00000017621	-	100	64.539	Echinops_telfairi
ENSPCAG00000014001	ZNF408	100	74.897	ENSEASG00005015461	ZNF408	100	74.483	Equus_asinus_asinus
ENSPCAG00000014001	ZNF408	100	75.310	ENSECAG00000010878	ZNF408	100	74.897	Equus_caballus
ENSPCAG00000014001	ZNF408	93	67.113	ENSEEUG00000010466	ZNF408	93	67.113	Erinaceus_europaeus
ENSPCAG00000014001	ZNF408	100	76.495	ENSFCAG00000029105	ZNF408	100	76.078	Felis_catus
ENSPCAG00000014001	ZNF408	84	38.897	ENSFHEG00000016754	-	79	38.462	Fundulus_heteroclitus
ENSPCAG00000014001	ZNF408	94	35.918	ENSGAFG00000018557	-	81	38.916	Gambusia_affinis
ENSPCAG00000014001	ZNF408	99	75.352	ENSGGOG00000010152	ZNF408	100	75.417	Gorilla_gorilla
ENSPCAG00000014001	ZNF408	86	84.887	ENSLAFG00000027848	ZNF408	99	84.405	Loxodonta_africana
ENSPCAG00000014001	ZNF408	99	78.702	ENSMICG00000045320	ZNF408	100	78.442	Microcebus_murinus
ENSPCAG00000014001	ZNF408	72	53.385	ENSMODG00000019895	-	88	52.882	Monodelphis_domestica
ENSPCAG00000014001	ZNF408	98	75.809	ENSMPUG00000005490	ZNF408	100	75.172	Mustela_putorius_furo
ENSPCAG00000014001	ZNF408	99	68.436	ENSNGAG00000000309	Zfp408	99	67.877	Nannospalax_galili
ENSPCAG00000014001	ZNF408	100	75.556	ENSNLEG00000014132	ZNF408	100	75.556	Nomascus_leucogenys
ENSPCAG00000014001	ZNF408	99	61.732	ENSOPRG00000009225	ZNF408	100	61.173	Ochotona_princeps
ENSPCAG00000014001	ZNF408	100	71.944	ENSOCUG00000010953	ZNF408	100	71.627	Oryctolagus_cuniculus
ENSPCAG00000014001	ZNF408	85	78.793	ENSOGAG00000034080	ZNF408	99	78.467	Otolemur_garnettii
ENSPCAG00000014001	ZNF408	99	75.775	ENSPPAG00000034993	ZNF408	100	75.833	Pan_paniscus
ENSPCAG00000014001	ZNF408	100	76.356	ENSPPRG00000016866	ZNF408	100	75.939	Panthera_pardus
ENSPCAG00000014001	ZNF408	100	76.000	ENSPTIG00000015467	ZNF408	100	75.586	Panthera_tigris_altaica
ENSPCAG00000014001	ZNF408	99	75.634	ENSPTRG00000003551	ZNF408	100	75.694	Pan_troglodytes
ENSPCAG00000014001	ZNF408	76	68.182	ENSPEMG00000016757	Zfp408	99	67.942	Peromyscus_maniculatus_bairdii
ENSPCAG00000014001	ZNF408	92	36.662	ENSPFOG00000001760	-	99	46.973	Poecilia_formosa
ENSPCAG00000014001	ZNF408	83	43.636	ENSPLAG00000019895	-	99	43.636	Poecilia_latipinna
ENSPCAG00000014001	ZNF408	62	45.870	ENSPMEG00000021147	-	79	47.343	Poecilia_mexicana
ENSPCAG00000014001	ZNF408	94	36.585	ENSPREG00000017068	-	82	39.542	Poecilia_reticulata
ENSPCAG00000014001	ZNF408	98	75.499	ENSPPYG00000003318	ZNF408	100	77.500	Pongo_abelii
ENSPCAG00000014001	ZNF408	99	77.746	ENSPCOG00000028698	ZNF408	100	77.361	Propithecus_coquereli
ENSPCAG00000014001	ZNF408	98	76.587	ENSPVAG00000015791	ZNF408	100	74.689	Pteropus_vampyrus
ENSPCAG00000014001	ZNF408	98	73.267	ENSSBOG00000033023	ZNF408	100	73.296	Saimiri_boliviensis_boliviensis
ENSPCAG00000014001	ZNF408	100	75.586	ENSSSCG00000023097	ZNF408	97	75.448	Sus_scrofa
ENSPCAG00000014001	ZNF408	75	87.251	ENSTBEG00000004260	ZNF408	83	87.251	Tupaia_belangeri
ENSPCAG00000014001	ZNF408	100	74.862	ENSUAMG00000026154	ZNF408	100	75.000	Ursus_americanus
ENSPCAG00000014001	ZNF408	100	75.000	ENSUMAG00000014405	ZNF408	100	75.000	Ursus_maritimus
ENSPCAG00000014001	ZNF408	100	75.995	ENSVVUG00000026805	ZNF408	97	75.857	Vulpes_vulpes
ENSPCAG00000014001	ZNF408	52	54.881	ENSXETG00000001980	znf408	100	53.562	Xenopus_tropicalis
ENSPCAG00000014001	ZNF408	56	48.872	ENSXCOG00000002869	-	77	47.462	Xiphophorus_couchianus
ENSPCAG00000014001	ZNF408	69	43.056	ENSXMAG00000018347	-	75	47.382	Xiphophorus_maculatus