EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000014169 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 26941 bases
Position: chrGeneScaffold_2468:32971-59911
Accession: 21185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000013288	CAF1	PF04857.20	1.6e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000014222	PNLDC1-201	1593	-	ENSPCAP00000013288	530 (aa)	-	UPI00018AF0CA

Gene Model

Click here to download ENSPCAG00000014169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000014169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000014169	PNLDC1	99	76.705	ENSG00000146453	PNLDC1	99	76.705	Homo_sapiens
ENSPCAG00000014169	PNLDC1	99	76.371	ENSAMEG00000015371	PNLDC1	99	76.371	Ailuropoda_melanoleuca
ENSPCAG00000014169	PNLDC1	95	53.216	ENSAPLG00000007014	PNLDC1	98	53.216	Anas_platyrhynchos
ENSPCAG00000014169	PNLDC1	100	55.075	ENSACAG00000013667	PNLDC1	100	55.075	Anolis_carolinensis
ENSPCAG00000014169	PNLDC1	99	76.136	ENSANAG00000034713	PNLDC1	100	76.321	Aotus_nancymaae
ENSPCAG00000014169	PNLDC1	95	75.944	ENSBTAG00000015166	PNLDC1	95	75.944	Bos_taurus
ENSPCAG00000014169	PNLDC1	99	75.379	ENSCJAG00000011865	PNLDC1	99	75.379	Callithrix_jacchus
ENSPCAG00000014169	PNLDC1	99	78.113	ENSCAFG00000000740	PNLDC1	99	78.113	Canis_familiaris
ENSPCAG00000014169	PNLDC1	99	78.113	ENSCAFG00020017742	PNLDC1	94	84.177	Canis_lupus_dingo
ENSPCAG00000014169	PNLDC1	99	76.660	ENSCHIG00000003141	PNLDC1	99	76.660	Capra_hircus
ENSPCAG00000014169	PNLDC1	99	74.621	ENSTSYG00000005606	PNLDC1	99	74.621	Carlito_syrichta
ENSPCAG00000014169	PNLDC1	99	51.321	ENSCAPG00000011893	PNLDC1	99	51.321	Cavia_aperea
ENSPCAG00000014169	PNLDC1	99	67.420	ENSCPOG00000019565	PNLDC1	99	67.420	Cavia_porcellus
ENSPCAG00000014169	PNLDC1	99	76.136	ENSCCAG00000026232	PNLDC1	99	76.136	Cebus_capucinus
ENSPCAG00000014169	PNLDC1	99	75.568	ENSCATG00000033196	PNLDC1	99	75.568	Cercocebus_atys
ENSPCAG00000014169	PNLDC1	99	72.453	ENSCLAG00000003228	PNLDC1	99	72.453	Chinchilla_lanigera
ENSPCAG00000014169	PNLDC1	96	75.049	ENSCSAG00000012478	PNLDC1	98	75.049	Chlorocebus_sabaeus
ENSPCAG00000014169	PNLDC1	96	59.570	ENSCPBG00000004050	PNLDC1	100	59.570	Chrysemys_picta_bellii
ENSPCAG00000014169	PNLDC1	95	75.348	ENSCANG00000043076	PNLDC1	97	75.348	Colobus_angolensis_palliatus
ENSPCAG00000014169	PNLDC1	99	72.830	ENSCGRG00001007470	-	99	72.830	Cricetulus_griseus_chok1gshd
ENSPCAG00000014169	PNLDC1	99	59.357	ENSCGRG00001011981	-	99	59.357	Cricetulus_griseus_chok1gshd
ENSPCAG00000014169	PNLDC1	99	60.870	ENSCGRG00000003103	-	99	60.870	Cricetulus_griseus_crigri
ENSPCAG00000014169	PNLDC1	99	72.830	ENSCGRG00000010221	-	99	72.830	Cricetulus_griseus_crigri
ENSPCAG00000014169	PNLDC1	99	78.113	ENSDNOG00000013709	PNLDC1	99	78.113	Dasypus_novemcinctus
ENSPCAG00000014169	PNLDC1	99	70.280	ENSDORG00000011517	Pnldc1	99	81.150	Dipodomys_ordii
ENSPCAG00000014169	PNLDC1	93	69.231	ENSETEG00000007587	PNLDC1	99	69.231	Echinops_telfairi
ENSPCAG00000014169	PNLDC1	99	74.164	ENSEASG00005019029	PNLDC1	99	74.164	Equus_asinus_asinus
ENSPCAG00000014169	PNLDC1	99	77.925	ENSECAG00000012898	PNLDC1	99	77.925	Equus_caballus
ENSPCAG00000014169	PNLDC1	99	78.072	ENSFCAG00000002848	PNLDC1	99	78.072	Felis_catus
ENSPCAG00000014169	PNLDC1	94	52.286	ENSFALG00000012081	PNLDC1	99	52.286	Ficedula_albicollis
ENSPCAG00000014169	PNLDC1	99	73.396	ENSFDAG00000021334	PNLDC1	99	73.396	Fukomys_damarensis
ENSPCAG00000014169	PNLDC1	79	53.682	ENSGALG00000011624	PNLDC1	82	53.682	Gallus_gallus
ENSPCAG00000014169	PNLDC1	99	59.659	ENSGAGG00000015276	PNLDC1	100	60.331	Gopherus_agassizii
ENSPCAG00000014169	PNLDC1	99	76.326	ENSGGOG00000014077	PNLDC1	99	76.326	Gorilla_gorilla
ENSPCAG00000014169	PNLDC1	99	73.396	ENSHGLG00000006889	PNLDC1	99	73.396	Heterocephalus_glaber_female
ENSPCAG00000014169	PNLDC1	99	73.396	ENSHGLG00100018275	PNLDC1	99	73.396	Heterocephalus_glaber_male
ENSPCAG00000014169	PNLDC1	99	76.894	ENSSTOG00000005595	PNLDC1	99	76.894	Ictidomys_tridecemlineatus
ENSPCAG00000014169	PNLDC1	100	69.492	ENSJJAG00000009937	Pnldc1	100	69.492	Jaculus_jaculus
ENSPCAG00000014169	PNLDC1	59	84.444	ENSLAFG00000030189	PNLDC1	92	84.444	Loxodonta_africana
ENSPCAG00000014169	PNLDC1	99	75.947	ENSMFAG00000041296	PNLDC1	99	75.947	Macaca_fascicularis
ENSPCAG00000014169	PNLDC1	99	75.947	ENSMMUG00000004181	PNLDC1	99	75.947	Macaca_mulatta
ENSPCAG00000014169	PNLDC1	99	75.947	ENSMNEG00000034271	PNLDC1	99	75.947	Macaca_nemestrina
ENSPCAG00000014169	PNLDC1	99	73.157	ENSMLEG00000044059	PNLDC1	99	73.157	Mandrillus_leucophaeus
ENSPCAG00000014169	PNLDC1	95	53.557	ENSMGAG00000012470	PNLDC1	97	53.557	Meleagris_gallopavo
ENSPCAG00000014169	PNLDC1	99	59.774	ENSMAUG00000012298	Pnldc1	100	59.774	Mesocricetus_auratus
ENSPCAG00000014169	PNLDC1	99	76.515	ENSMICG00000008021	PNLDC1	99	76.515	Microcebus_murinus
ENSPCAG00000014169	PNLDC1	99	77.068	ENSMOCG00000014287	Pnldc1	99	77.068	Microtus_ochrogaster
ENSPCAG00000014169	PNLDC1	99	66.983	ENSMODG00000007420	PNLDC1	99	66.983	Monodelphis_domestica
ENSPCAG00000014169	PNLDC1	99	77.883	MGP_CAROLIEiJ_G0021045	Pnldc1	99	77.883	Mus_caroli
ENSPCAG00000014169	PNLDC1	99	77.505	ENSMUSG00000073460	Pnldc1	100	84.127	Mus_musculus
ENSPCAG00000014169	PNLDC1	99	77.841	MGP_PahariEiJ_G0023361	Pnldc1	99	77.841	Mus_pahari
ENSPCAG00000014169	PNLDC1	99	78.072	MGP_SPRETEiJ_G0021975	Pnldc1	99	78.072	Mus_spretus
ENSPCAG00000014169	PNLDC1	99	77.736	ENSMPUG00000004920	PNLDC1	99	77.736	Mustela_putorius_furo
ENSPCAG00000014169	PNLDC1	99	76.792	ENSMLUG00000000747	PNLDC1	99	76.792	Myotis_lucifugus
ENSPCAG00000014169	PNLDC1	99	77.170	ENSNGAG00000017714	Pnldc1	99	77.170	Nannospalax_galili
ENSPCAG00000014169	PNLDC1	97	75.244	ENSNLEG00000011282	PNLDC1	99	75.244	Nomascus_leucogenys
ENSPCAG00000014169	PNLDC1	60	56.250	ENSMEUG00000011926	-	64	56.250	Notamacropus_eugenii
ENSPCAG00000014169	PNLDC1	54	57.292	ENSMEUG00000014042	-	100	57.292	Notamacropus_eugenii
ENSPCAG00000014169	PNLDC1	79	84.091	ENSOPRG00000003813	PNLDC1	79	84.091	Ochotona_princeps
ENSPCAG00000014169	PNLDC1	99	72.917	ENSODEG00000008047	PNLDC1	99	72.917	Octodon_degus
ENSPCAG00000014169	PNLDC1	99	51.985	ENSOANG00000012199	PNLDC1	99	53.875	Ornithorhynchus_anatinus
ENSPCAG00000014169	PNLDC1	99	76.038	ENSOCUG00000013867	PNLDC1	99	76.038	Oryctolagus_cuniculus
ENSPCAG00000014169	PNLDC1	99	77.462	ENSOGAG00000007331	PNLDC1	99	77.462	Otolemur_garnettii
ENSPCAG00000014169	PNLDC1	99	76.281	ENSOARG00000004585	PNLDC1	99	76.281	Ovis_aries
ENSPCAG00000014169	PNLDC1	99	76.515	ENSPPAG00000026651	PNLDC1	99	76.515	Pan_paniscus
ENSPCAG00000014169	PNLDC1	99	77.883	ENSPPRG00000012854	PNLDC1	99	77.883	Panthera_pardus
ENSPCAG00000014169	PNLDC1	98	75.862	ENSPTIG00000011501	PNLDC1	98	75.862	Panthera_tigris_altaica
ENSPCAG00000014169	PNLDC1	99	76.515	ENSPTRG00000018762	PNLDC1	99	76.515	Pan_troglodytes
ENSPCAG00000014169	PNLDC1	99	76.136	ENSPANG00000022009	PNLDC1	99	76.136	Papio_anubis
ENSPCAG00000014169	PNLDC1	99	77.462	ENSPEMG00000016301	Pnldc1	99	77.462	Peromyscus_maniculatus_bairdii
ENSPCAG00000014169	PNLDC1	83	67.882	ENSPCIG00000023412	PNLDC1	100	67.882	Phascolarctos_cinereus
ENSPCAG00000014169	PNLDC1	55	30.189	ENSPCIG00000001259	PARN	70	30.124	Phascolarctos_cinereus
ENSPCAG00000014169	PNLDC1	99	73.535	ENSPPYG00000017148	PNLDC1	99	73.535	Pongo_abelii
ENSPCAG00000014169	PNLDC1	99	76.705	ENSPCOG00000025722	PNLDC1	99	76.705	Propithecus_coquereli
ENSPCAG00000014169	PNLDC1	70	80.054	ENSPVAG00000005325	PNLDC1	70	80.054	Pteropus_vampyrus
ENSPCAG00000014169	PNLDC1	99	77.736	ENSRNOG00000023140	Pnldc1	100	79.375	Rattus_norvegicus
ENSPCAG00000014169	PNLDC1	99	75.283	ENSRBIG00000033806	PNLDC1	99	75.283	Rhinopithecus_bieti
ENSPCAG00000014169	PNLDC1	95	75.348	ENSRROG00000043919	PNLDC1	97	75.348	Rhinopithecus_roxellana
ENSPCAG00000014169	PNLDC1	99	76.894	ENSSBOG00000019135	PNLDC1	99	76.894	Saimiri_boliviensis_boliviensis
ENSPCAG00000014169	PNLDC1	96	67.126	ENSSHAG00000015192	PNLDC1	97	67.126	Sarcophilus_harrisii
ENSPCAG00000014169	PNLDC1	54	64.336	ENSSPUG00000004627	PNLDC1	99	62.500	Sphenodon_punctatus
ENSPCAG00000014169	PNLDC1	96	76.378	ENSSSCG00000004046	PNLDC1	99	76.378	Sus_scrofa
ENSPCAG00000014169	PNLDC1	91	52.990	ENSTGUG00000011418	PNLDC1	99	52.990	Taeniopygia_guttata
ENSPCAG00000014169	PNLDC1	96	66.798	ENSTBEG00000009131	PNLDC1	98	66.798	Tupaia_belangeri
ENSPCAG00000014169	PNLDC1	70	84.097	ENSTTRG00000010409	PNLDC1	70	84.097	Tursiops_truncatus
ENSPCAG00000014169	PNLDC1	99	67.351	ENSUAMG00000015783	PNLDC1	99	67.351	Ursus_americanus
ENSPCAG00000014169	PNLDC1	95	71.176	ENSUMAG00000011903	PNLDC1	99	71.176	Ursus_maritimus
ENSPCAG00000014169	PNLDC1	96	78.474	ENSVVUG00000006586	PNLDC1	98	77.113	Vulpes_vulpes