EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000014197 (Gene tree)
Gene ID: -
Gene Symbol: LARP6
Alias: FLJ11196|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 6065 bases
Position: chrscaffold_14169:25771-31835
Accession: 24012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000013261	La	PF05383.17	9.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000014192	LARP6-201	1269	-	ENSPCAP00000013261	422 (aa)	-	UPI00018ADE03

Gene Model

Click here to download ENSPCAG00000014197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000014197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000014197	LARP6	76	93.333	ENSG00000166173	LARP6	100	87.097	Homo_sapiens
ENSPCAG00000014197	LARP6	76	90.361	ENSAMEG00000008897	LARP6	74	90.361	Ailuropoda_melanoleuca
ENSPCAG00000014197	LARP6	73	63.529	ENSACIG00000005166	larp6a	61	63.529	Amphilophus_citrinellus
ENSPCAG00000014197	LARP6	73	63.529	ENSAPEG00000008077	larp6a	60	63.529	Amphiprion_percula
ENSPCAG00000014197	LARP6	75	77.439	ENSAPLG00000009914	LARP6	75	77.439	Anas_platyrhynchos
ENSPCAG00000014197	LARP6	74	74.390	ENSACAG00000008613	LARP6	73	74.390	Anolis_carolinensis
ENSPCAG00000014197	LARP6	76	93.333	ENSANAG00000024860	LARP6	64	93.333	Aotus_nancymaae
ENSPCAG00000014197	LARP6	62	51.572	ENSAMXG00000036816	-	64	51.572	Astyanax_mexicanus
ENSPCAG00000014197	LARP6	76	91.566	ENSBTAG00000003915	LARP6	65	91.566	Bos_taurus
ENSPCAG00000014197	LARP6	76	93.333	ENSCJAG00000018642	-	64	93.333	Callithrix_jacchus
ENSPCAG00000014197	LARP6	76	93.333	ENSCJAG00000046236	-	64	93.333	Callithrix_jacchus
ENSPCAG00000014197	LARP6	76	91.566	ENSCAFG00000017616	LARP6	74	91.566	Canis_familiaris
ENSPCAG00000014197	LARP6	76	91.566	ENSCAFG00020007296	LARP6	65	91.566	Canis_lupus_dingo
ENSPCAG00000014197	LARP6	76	92.169	ENSCHIG00000013742	LARP6	65	92.169	Capra_hircus
ENSPCAG00000014197	LARP6	76	93.373	ENSTSYG00000028124	LARP6	65	93.373	Carlito_syrichta
ENSPCAG00000014197	LARP6	76	91.617	ENSCAPG00000015452	LARP6	75	91.617	Cavia_aperea
ENSPCAG00000014197	LARP6	76	91.018	ENSCPOG00000022687	LARP6	65	91.018	Cavia_porcellus
ENSPCAG00000014197	LARP6	76	93.333	ENSCCAG00000036320	LARP6	64	93.333	Cebus_capucinus
ENSPCAG00000014197	LARP6	76	93.333	ENSCATG00000042432	LARP6	64	93.333	Cercocebus_atys
ENSPCAG00000014197	LARP6	76	94.012	ENSCLAG00000007893	LARP6	65	94.012	Chinchilla_lanigera
ENSPCAG00000014197	LARP6	76	93.333	ENSCSAG00000013672	LARP6	64	93.333	Chlorocebus_sabaeus
ENSPCAG00000014197	LARP6	76	89.820	ENSCHOG00000003318	LARP6	67	89.820	Choloepus_hoffmanni
ENSPCAG00000014197	LARP6	75	76.829	ENSCPBG00000010771	LARP6	61	76.829	Chrysemys_picta_bellii
ENSPCAG00000014197	LARP6	76	92.771	ENSCANG00000025833	LARP6	75	92.771	Colobus_angolensis_palliatus
ENSPCAG00000014197	LARP6	76	92.216	ENSCGRG00001024472	Larp6	65	92.216	Cricetulus_griseus_chok1gshd
ENSPCAG00000014197	LARP6	76	92.216	ENSCGRG00000004527	Larp6	65	92.216	Cricetulus_griseus_crigri
ENSPCAG00000014197	LARP6	71	64.118	ENSDARG00000005355	larp6a	71	64.118	Danio_rerio
ENSPCAG00000014197	LARP6	76	91.018	ENSDNOG00000042993	LARP6	65	91.018	Dasypus_novemcinctus
ENSPCAG00000014197	LARP6	76	82.424	ENSDORG00000023910	Larp6	65	82.424	Dipodomys_ordii
ENSPCAG00000014197	LARP6	69	89.820	ENSETEG00000020390	LARP6	60	89.820	Echinops_telfairi
ENSPCAG00000014197	LARP6	76	93.373	ENSECAG00000014190	LARP6	70	93.373	Equus_caballus
ENSPCAG00000014197	LARP6	76	89.697	ENSFCAG00000001361	LARP6	64	89.697	Felis_catus
ENSPCAG00000014197	LARP6	75	75.309	ENSFALG00000012389	LARP6	67	75.309	Ficedula_albicollis
ENSPCAG00000014197	LARP6	76	92.169	ENSFDAG00000019994	LARP6	62	92.169	Fukomys_damarensis
ENSPCAG00000014197	LARP6	75	75.610	ENSGALG00000004046	LARP6	64	75.610	Gallus_gallus
ENSPCAG00000014197	LARP6	73	62.573	ENSGACG00000014622	larp6a	71	62.573	Gasterosteus_aculeatus
ENSPCAG00000014197	LARP6	76	92.771	ENSGGOG00000024151	LARP6	75	92.771	Gorilla_gorilla
ENSPCAG00000014197	LARP6	76	92.771	ENSHGLG00000015112	LARP6	64	92.771	Heterocephalus_glaber_female
ENSPCAG00000014197	LARP6	76	92.771	ENSHGLG00100013159	LARP6	75	92.771	Heterocephalus_glaber_male
ENSPCAG00000014197	LARP6	74	60.819	ENSHCOG00000001241	larp6a	60	61.404	Hippocampus_comes
ENSPCAG00000014197	LARP6	76	92.814	ENSSTOG00000024279	LARP6	69	92.814	Ictidomys_tridecemlineatus
ENSPCAG00000014197	LARP6	76	91.617	ENSJJAG00000011013	Larp6	66	91.617	Jaculus_jaculus
ENSPCAG00000014197	LARP6	73	63.372	ENSLBEG00000000170	larp6a	62	63.372	Labrus_bergylta
ENSPCAG00000014197	LARP6	61	54.088	ENSLACG00000002786	-	73	54.088	Latimeria_chalumnae
ENSPCAG00000014197	LARP6	75	73.494	ENSLACG00000018706	LARP6	61	73.494	Latimeria_chalumnae
ENSPCAG00000014197	LARP6	71	52.147	ENSLOCG00000008547	-	62	52.147	Lepisosteus_oculatus
ENSPCAG00000014197	LARP6	76	93.939	ENSLAFG00000016343	LARP6	71	93.939	Loxodonta_africana
ENSPCAG00000014197	LARP6	76	92.771	ENSMFAG00000035507	LARP6	71	92.771	Macaca_fascicularis
ENSPCAG00000014197	LARP6	76	93.333	ENSMMUG00000004429	LARP6	66	93.333	Macaca_mulatta
ENSPCAG00000014197	LARP6	76	93.333	ENSMNEG00000045335	LARP6	64	93.333	Macaca_nemestrina
ENSPCAG00000014197	LARP6	76	92.771	ENSMLEG00000038587	LARP6	75	92.771	Mandrillus_leucophaeus
ENSPCAG00000014197	LARP6	75	75.460	ENSMGAG00000005077	LARP6	75	75.460	Meleagris_gallopavo
ENSPCAG00000014197	LARP6	76	92.216	ENSMAUG00000018486	Larp6	65	92.216	Mesocricetus_auratus
ENSPCAG00000014197	LARP6	76	91.018	ENSMICG00000011234	LARP6	65	91.018	Microcebus_murinus
ENSPCAG00000014197	LARP6	76	92.216	ENSMOCG00000010492	Larp6	65	92.216	Microtus_ochrogaster
ENSPCAG00000014197	LARP6	73	64.118	ENSMMOG00000016284	larp6a	62	64.118	Mola_mola
ENSPCAG00000014197	LARP6	76	83.234	ENSMODG00000009034	LARP6	62	83.234	Monodelphis_domestica
ENSPCAG00000014197	LARP6	73	63.529	ENSMALG00000014439	larp6a	60	63.529	Monopterus_albus
ENSPCAG00000014197	LARP6	76	92.216	MGP_CAROLIEiJ_G0032314	Larp6	65	92.216	Mus_caroli
ENSPCAG00000014197	LARP6	76	92.216	ENSMUSG00000034839	Larp6	65	92.216	Mus_musculus
ENSPCAG00000014197	LARP6	76	90.419	MGP_PahariEiJ_G0015180	Larp6	65	90.419	Mus_pahari
ENSPCAG00000014197	LARP6	76	91.018	MGP_SPRETEiJ_G0033452	Larp6	65	91.018	Mus_spretus
ENSPCAG00000014197	LARP6	76	90.361	ENSMPUG00000017086	LARP6	74	90.361	Mustela_putorius_furo
ENSPCAG00000014197	LARP6	76	92.121	ENSMLUG00000010319	LARP6	64	92.121	Myotis_lucifugus
ENSPCAG00000014197	LARP6	76	92.216	ENSNGAG00000014238	Larp6	65	92.216	Nannospalax_galili
ENSPCAG00000014197	LARP6	73	62.941	ENSNBRG00000008120	larp6a	60	62.941	Neolamprologus_brichardi
ENSPCAG00000014197	LARP6	76	93.333	ENSNLEG00000013691	LARP6	64	93.333	Nomascus_leucogenys
ENSPCAG00000014197	LARP6	59	76.506	ENSOPRG00000004868	-	69	76.506	Ochotona_princeps
ENSPCAG00000014197	LARP6	76	90.303	ENSODEG00000015958	LARP6	64	89.820	Octodon_degus
ENSPCAG00000014197	LARP6	73	62.941	ENSONIG00000002901	larp6a	60	62.941	Oreochromis_niloticus
ENSPCAG00000014197	LARP6	76	80.838	ENSOCUG00000009306	LARP6	75	80.838	Oryctolagus_cuniculus
ENSPCAG00000014197	LARP6	73	65.294	ENSORLG00000014256	larp6a	62	65.294	Oryzias_latipes
ENSPCAG00000014197	LARP6	75	91.250	ENSOGAG00000000522	LARP6	65	90.909	Otolemur_garnettii
ENSPCAG00000014197	LARP6	76	90.964	ENSOARG00000018750	LARP6	74	90.964	Ovis_aries
ENSPCAG00000014197	LARP6	76	92.771	ENSPPAG00000031247	LARP6	75	92.771	Pan_paniscus
ENSPCAG00000014197	LARP6	76	89.697	ENSPPRG00000011282	LARP6	64	89.697	Panthera_pardus
ENSPCAG00000014197	LARP6	76	89.091	ENSPTIG00000015318	LARP6	65	88.554	Panthera_tigris_altaica
ENSPCAG00000014197	LARP6	76	93.333	ENSPTRG00000007234	LARP6	64	93.333	Pan_troglodytes
ENSPCAG00000014197	LARP6	76	93.333	ENSPANG00000016362	LARP6	64	93.333	Papio_anubis
ENSPCAG00000014197	LARP6	70	65.333	ENSPKIG00000020103	larp6a	60	64.024	Paramormyrops_kingsleyae
ENSPCAG00000014197	LARP6	61	83.654	ENSPSIG00000009071	LARP6	81	75.000	Pelodiscus_sinensis
ENSPCAG00000014197	LARP6	73	63.529	ENSPMGG00000006958	larp6a	63	63.529	Periophthalmus_magnuspinnatus
ENSPCAG00000014197	LARP6	76	91.018	ENSPEMG00000012909	Larp6	65	91.018	Peromyscus_maniculatus_bairdii
ENSPCAG00000014197	LARP6	76	83.636	ENSPCIG00000020765	LARP6	62	83.636	Phascolarctos_cinereus
ENSPCAG00000014197	LARP6	74	64.118	ENSPFOG00000014175	larp6a	60	64.118	Poecilia_formosa
ENSPCAG00000014197	LARP6	76	93.333	ENSPPYG00000006604	LARP6	64	93.333	Pongo_abelii
ENSPCAG00000014197	LARP6	76	92.169	ENSPCOG00000022934	LARP6	65	92.169	Propithecus_coquereli
ENSPCAG00000014197	LARP6	76	92.771	ENSPVAG00000005618	LARP6	65	92.771	Pteropus_vampyrus
ENSPCAG00000014197	LARP6	73	62.941	ENSPNYG00000009835	larp6a	60	62.941	Pundamilia_nyererei
ENSPCAG00000014197	LARP6	73	58.857	ENSPNAG00000017966	larp6a	51	61.143	Pygocentrus_nattereri
ENSPCAG00000014197	LARP6	76	91.018	ENSRNOG00000012438	Larp6	65	91.018	Rattus_norvegicus
ENSPCAG00000014197	LARP6	76	93.333	ENSRBIG00000032902	LARP6	65	93.333	Rhinopithecus_bieti
ENSPCAG00000014197	LARP6	76	93.333	ENSRROG00000043074	LARP6	64	93.333	Rhinopithecus_roxellana
ENSPCAG00000014197	LARP6	76	92.771	ENSSBOG00000024190	LARP6	75	92.771	Saimiri_boliviensis_boliviensis
ENSPCAG00000014197	LARP6	76	83.636	ENSSHAG00000018495	LARP6	74	83.636	Sarcophilus_harrisii
ENSPCAG00000014197	LARP6	73	62.651	ENSSFOG00015002254	LARP6	58	62.651	Scleropages_formosus
ENSPCAG00000014197	LARP6	73	65.868	ENSSFOG00015023268	larp6a	62	65.868	Scleropages_formosus
ENSPCAG00000014197	LARP6	75	76.220	ENSSPUG00000011312	LARP6	75	76.220	Sphenodon_punctatus
ENSPCAG00000014197	LARP6	76	92.771	ENSSSCG00000004974	LARP6	65	92.771	Sus_scrofa
ENSPCAG00000014197	LARP6	75	75.000	ENSTGUG00000005808	LARP6	74	75.000	Taeniopygia_guttata
ENSPCAG00000014197	LARP6	73	65.497	ENSTNIG00000011926	larp6a	63	65.497	Tetraodon_nigroviridis
ENSPCAG00000014197	LARP6	76	87.952	ENSTBEG00000015077	LARP6	75	87.952	Tupaia_belangeri
ENSPCAG00000014197	LARP6	76	89.157	ENSUAMG00000010467	LARP6	64	89.157	Ursus_americanus
ENSPCAG00000014197	LARP6	76	91.566	ENSVVUG00000015227	LARP6	71	91.566	Vulpes_vulpes
ENSPCAG00000014197	LARP6	75	76.506	ENSXETG00000020340	larp6	63	76.506	Xenopus_tropicalis
ENSPCAG00000014197	LARP6	74	64.118	ENSXCOG00000012654	larp6a	64	64.118	Xiphophorus_couchianus