EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPCAG00000014368 (Gene tree)
Gene ID
-
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Procavia_capensis
Status
putative
Strand
Minus strand
Length
22703 bases
Position
chrGeneScaffold_7521:13784-36486
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPCAP00000013447CSDPF00313.226.7e-8515
ENSPCAP00000013447CSDPF00313.226.7e-8525
ENSPCAP00000013447CSDPF00313.226.7e-8535
ENSPCAP00000013447CSDPF00313.226.7e-8545
ENSPCAP00000013447CSDPF00313.226.7e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPCAT00000014390CSDE1-2012439-ENSPCAP00000013447812 (aa)-UPI00018ADD20
Gene Model
Click here to download ENSPCAG00000014368's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000014368's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPCAG00000014368CSDE19698.574ENSG00000009307CSDE1100100.000Homo_sapiens
ENSPCAG00000014368CSDE19083.495ENSAPOG00000015538csde110083.495Acanthochromis_polyacanthus
ENSPCAG00000014368CSDE110092.260ENSAMEG00000017129CSDE110092.015Ailuropoda_melanoleuca
ENSPCAG00000014368CSDE17177.027ENSACIG00000015175csde110077.027Amphilophus_citrinellus
ENSPCAG00000014368CSDE19577.445ENSAOCG00000011510csde19684.112Amphiprion_ocellaris
ENSPCAG00000014368CSDE19084.466ENSAPEG00000007194csde110084.466Amphiprion_percula
ENSPCAG00000014368CSDE19474.675ENSATEG00000003864csde110074.675Anabas_testudineus
ENSPCAG00000014368CSDE19487.744ENSAPLG00000008797CSDE110087.744Anas_platyrhynchos
ENSPCAG00000014368CSDE19094.175ENSACAG00000003120CSDE110094.175Anolis_carolinensis
ENSPCAG00000014368CSDE19698.098ENSANAG00000024665CSDE110098.098Aotus_nancymaae
ENSPCAG00000014368CSDE17270.683ENSANAG00000028396-9070.683Aotus_nancymaae
ENSPCAG00000014368CSDE19083.495ENSACLG00000013296csde110083.495Astatotilapia_calliptera
ENSPCAG00000014368CSDE19474.449ENSAMXG00000007436csde110074.449Astyanax_mexicanus
ENSPCAG00000014368CSDE19697.940ENSBTAG00000000678CSDE110097.940Bos_taurus
ENSPCAG00000014368CSDE19698.257ENSCJAG00000012565CSDE110098.257Callithrix_jacchus
ENSPCAG00000014368CSDE19893.108ENSCAFG00000009618CSDE110093.609Canis_familiaris
ENSPCAG00000014368CSDE19494.263ENSCAFG00020000481CSDE110094.263Canis_lupus_dingo
ENSPCAG00000014368CSDE19697.940ENSCHIG00000017250CSDE110097.940Capra_hircus
ENSPCAG00000014368CSDE19698.257ENSTSYG00000003747CSDE110098.257Carlito_syrichta
ENSPCAG00000014368CSDE19475.160ENSCAPG00000015128CSDE110075.160Cavia_aperea
ENSPCAG00000014368CSDE18997.342ENSCPOG00000040388CSDE110097.342Cavia_porcellus
ENSPCAG00000014368CSDE17475.495ENSCCAG00000033677-9975.059Cebus_capucinus
ENSPCAG00000014368CSDE17573.274ENSCCAG00000030878-9173.274Cebus_capucinus
ENSPCAG00000014368CSDE19698.257ENSCCAG00000036794CSDE110099.029Cebus_capucinus
ENSPCAG00000014368CSDE19698.574ENSCATG00000036962CSDE110098.574Cercocebus_atys
ENSPCAG00000014368CSDE19098.257ENSCLAG00000006618CSDE110098.257Chinchilla_lanigera
ENSPCAG00000014368CSDE19698.574ENSCSAG00000001658CSDE110098.574Chlorocebus_sabaeus
ENSPCAG00000014368CSDE110097.638ENSCHOG00000000918CSDE19597.638Choloepus_hoffmanni
ENSPCAG00000014368CSDE19098.058ENSCPBG00000016547CSDE110098.058Chrysemys_picta_bellii
ENSPCAG00000014368CSDE19240.909ENSCING00000014465-9640.909Ciona_intestinalis
ENSPCAG00000014368CSDE19152.632ENSCSAVG00000008100-9952.632Ciona_savignyi
ENSPCAG00000014368CSDE17996.121ENSCANG00000031069-9992.941Colobus_angolensis_palliatus
ENSPCAG00000014368CSDE19698.574ENSCANG00000035096CSDE110098.574Colobus_angolensis_palliatus
ENSPCAG00000014368CSDE19098.098ENSCGRG00001016833-10098.098Cricetulus_griseus_chok1gshd
ENSPCAG00000014368CSDE19477.173ENSCGRG00001014011-10077.173Cricetulus_griseus_chok1gshd
ENSPCAG00000014368CSDE17697.327ENSCGRG00000002225-10097.327Cricetulus_griseus_crigri
ENSPCAG00000014368CSDE19472.650ENSCGRG00000005831-10072.650Cricetulus_griseus_crigri
ENSPCAG00000014368CSDE18883.495ENSCSEG00000002620csde19683.178Cynoglossus_semilaevis
ENSPCAG00000014368CSDE19083.495ENSCVAG00000001344csde110083.495Cyprinodon_variegatus
ENSPCAG00000014368CSDE19086.408ENSDARG00000074758csde110089.362Danio_rerio
ENSPCAG00000014368CSDE19594.171ENSDNOG00000010287-9494.171Dasypus_novemcinctus
ENSPCAG00000014368CSDE17569.582ENSDNOG00000034464-10069.582Dasypus_novemcinctus
ENSPCAG00000014368CSDE19097.623ENSDORG00000011609Csde110097.623Dipodomys_ordii
ENSPCAG00000014368CSDE18569.620FBgn0263352Unr7267.470Drosophila_melanogaster
ENSPCAG00000014368CSDE19473.107ENSETEG00000013678-9973.107Echinops_telfairi
ENSPCAG00000014368CSDE17468.709ENSETEG00000007109-9968.709Echinops_telfairi
ENSPCAG00000014368CSDE18582.437ENSETEG00000006280-10082.437Echinops_telfairi
ENSPCAG00000014368CSDE19498.347ENSETEG00000002491-7898.347Echinops_telfairi
ENSPCAG00000014368CSDE18957.321ENSEBUG00000008647csde19956.044Eptatretus_burgeri
ENSPCAG00000014368CSDE110092.980ENSEASG00005006284CSDE110099.029Equus_asinus_asinus
ENSPCAG00000014368CSDE110092.980ENSECAG00000020885CSDE110099.029Equus_caballus
ENSPCAG00000014368CSDE19399.476ENSEEUG00000006286CSDE17499.476Erinaceus_europaeus
ENSPCAG00000014368CSDE18884.466ENSELUG00000015507csde19984.466Esox_lucius
ENSPCAG00000014368CSDE19698.574ENSFCAG00000029266CSDE110098.574Felis_catus
ENSPCAG00000014368CSDE19097.087ENSFALG00000003407CSDE110097.087Ficedula_albicollis
ENSPCAG00000014368CSDE19098.098ENSFDAG00000007882CSDE110098.098Fukomys_damarensis
ENSPCAG00000014368CSDE19083.495ENSFHEG00000010799csde110083.495Fundulus_heteroclitus
ENSPCAG00000014368CSDE19082.524ENSGMOG00000012731csde110082.524Gadus_morhua
ENSPCAG00000014368CSDE18897.087ENSGALG00000002139CSDE19897.087Gallus_gallus
ENSPCAG00000014368CSDE18772.713ENSGAFG00000005241csde19572.713Gambusia_affinis
ENSPCAG00000014368CSDE19083.495ENSGACG00000004544csde110083.495Gasterosteus_aculeatus
ENSPCAG00000014368CSDE19098.058ENSGAGG00000017685CSDE110098.058Gopherus_agassizii
ENSPCAG00000014368CSDE19698.574ENSGGOG00000002164CSDE110098.574Gorilla_gorilla
ENSPCAG00000014368CSDE19083.495ENSHBUG00000020315csde110083.495Haplochromis_burtoni
ENSPCAG00000014368CSDE17589.532ENSHGLG00000010039-10089.532Heterocephalus_glaber_female
ENSPCAG00000014368CSDE19090.291ENSHGLG00000019549-10090.291Heterocephalus_glaber_female
ENSPCAG00000014368CSDE19489.320ENSHGLG00000000650-9989.320Heterocephalus_glaber_female
ENSPCAG00000014368CSDE18888.114ENSHGLG00000008555-9988.114Heterocephalus_glaber_female
ENSPCAG00000014368CSDE19480.552ENSHGLG00000007471-9880.552Heterocephalus_glaber_female
ENSPCAG00000014368CSDE19098.058ENSHGLG00000009620-10098.058Heterocephalus_glaber_female
ENSPCAG00000014368CSDE19484.746ENSHGLG00000003829-10084.746Heterocephalus_glaber_female
ENSPCAG00000014368CSDE19478.055ENSHGLG00100007287-9878.055Heterocephalus_glaber_male
ENSPCAG00000014368CSDE19098.415ENSHGLG00100019438-10098.415Heterocephalus_glaber_male
ENSPCAG00000014368CSDE18286.583ENSHGLG00100004195-10086.583Heterocephalus_glaber_male
ENSPCAG00000014368CSDE17589.310ENSHGLG00100006910-10089.310Heterocephalus_glaber_male
ENSPCAG00000014368CSDE19480.052ENSHGLG00100012072-10082.126Heterocephalus_glaber_male
ENSPCAG00000014368CSDE19089.320ENSHGLG00100002245-9989.320Heterocephalus_glaber_male
ENSPCAG00000014368CSDE19476.432ENSHGLG00100001846-9978.115Heterocephalus_glaber_male
ENSPCAG00000014368CSDE17681.069ENSHGLG00100004833-10081.069Heterocephalus_glaber_male
ENSPCAG00000014368CSDE19475.987ENSHCOG00000004158csde19582.243Hippocampus_comes
ENSPCAG00000014368CSDE19473.930ENSIPUG00000000355csde110073.930Ictalurus_punctatus
ENSPCAG00000014368CSDE18777.849ENSSTOG00000032722-9877.849Ictidomys_tridecemlineatus
ENSPCAG00000014368CSDE19475.959ENSSTOG00000030994-10075.959Ictidomys_tridecemlineatus
ENSPCAG00000014368CSDE19098.058ENSJJAG00000019571Csde110098.058Jaculus_jaculus
ENSPCAG00000014368CSDE19082.524ENSKMAG00000005685csde110082.524Kryptolebias_marmoratus
ENSPCAG00000014368CSDE19477.445ENSLBEG00000014770csde19682.243Labrus_bergylta
ENSPCAG00000014368CSDE19382.400ENSLACG00000018452CSDE19684.034Latimeria_chalumnae
ENSPCAG00000014368CSDE19679.272ENSLOCG00000010413csde19688.889Lepisosteus_oculatus
ENSPCAG00000014368CSDE19592.477ENSLAFG00000007150CSDE19692.477Loxodonta_africana
ENSPCAG00000014368CSDE19698.574ENSMFAG00000003674CSDE110098.574Macaca_fascicularis
ENSPCAG00000014368CSDE19698.574ENSMMUG00000001974CSDE110098.574Macaca_mulatta
ENSPCAG00000014368CSDE19698.574ENSMNEG00000045247CSDE110098.574Macaca_nemestrina
ENSPCAG00000014368CSDE19698.257ENSMLEG00000038673CSDE110098.257Mandrillus_leucophaeus
ENSPCAG00000014368CSDE19478.076ENSMAMG00000008821csde19684.112Mastacembelus_armatus
ENSPCAG00000014368CSDE19477.093ENSMZEG00005021675csde19683.178Maylandia_zebra
ENSPCAG00000014368CSDE18898.058ENSMGAG00000016381CSDE19898.058Meleagris_gallopavo
ENSPCAG00000014368CSDE19098.098ENSMAUG00000014031Csde110098.098Mesocricetus_auratus
ENSPCAG00000014368CSDE19697.623ENSMICG00000002050CSDE110097.623Microcebus_murinus
ENSPCAG00000014368CSDE19098.098ENSMOCG00000018960Csde110098.098Microtus_ochrogaster
ENSPCAG00000014368CSDE19474.935ENSMMOG00000015075csde110074.935Mola_mola
ENSPCAG00000014368CSDE19098.058ENSMODG00000004685CSDE110098.058Monodelphis_domestica
ENSPCAG00000014368CSDE19474.935ENSMALG00000007132csde110074.935Monopterus_albus
ENSPCAG00000014368CSDE19098.058MGP_CAROLIEiJ_G0025444Csde110098.058Mus_caroli
ENSPCAG00000014368CSDE19098.257ENSMUSG00000068823Csde110098.257Mus_musculus
ENSPCAG00000014368CSDE19098.257MGP_PahariEiJ_G0026888Csde110098.257Mus_pahari
ENSPCAG00000014368CSDE19098.257MGP_SPRETEiJ_G0026394Csde110098.257Mus_spretus
ENSPCAG00000014368CSDE189100.000ENSMPUG00000005753CSDE199100.000Mustela_putorius_furo
ENSPCAG00000014368CSDE110092.374ENSMLUG00000005681CSDE110092.866Myotis_lucifugus
ENSPCAG00000014368CSDE19169.933ENSNGAG00000012599-10069.933Nannospalax_galili
ENSPCAG00000014368CSDE19098.058ENSNGAG00000021929Csde110098.058Nannospalax_galili
ENSPCAG00000014368CSDE19474.642ENSNBRG00000020808csde110074.642Neolamprologus_brichardi
ENSPCAG00000014368CSDE19698.415ENSNLEG00000004842CSDE110098.415Nomascus_leucogenys
ENSPCAG00000014368CSDE19395.745ENSMEUG00000002677CSDE110095.745Notamacropus_eugenii
ENSPCAG00000014368CSDE19893.452ENSOPRG00000005002CSDE18893.970Ochotona_princeps
ENSPCAG00000014368CSDE17667.920ENSODEG00000005979-9867.920Octodon_degus
ENSPCAG00000014368CSDE19097.781ENSODEG00000007383-10097.781Octodon_degus
ENSPCAG00000014368CSDE19083.495ENSONIG00000009309csde110083.495Oreochromis_niloticus
ENSPCAG00000014368CSDE19098.058ENSOANG00000003346-10098.058Ornithorhynchus_anatinus
ENSPCAG00000014368CSDE19697.940ENSOCUG00000016438CSDE110097.940Oryctolagus_cuniculus
ENSPCAG00000014368CSDE19083.495ENSORLG00000000707csde110083.495Oryzias_latipes
ENSPCAG00000014368CSDE19083.495ENSORLG00020005148csde110083.495Oryzias_latipes_hni
ENSPCAG00000014368CSDE19083.495ENSORLG00015019415csde110083.495Oryzias_latipes_hsok
ENSPCAG00000014368CSDE19083.495ENSOMEG00000015656csde110083.495Oryzias_melastigma
ENSPCAG00000014368CSDE110093.481ENSOGAG00000012127CSDE110093.973Otolemur_garnettii
ENSPCAG00000014368CSDE110092.620ENSOARG00000020034CSDE110093.112Ovis_aries
ENSPCAG00000014368CSDE19698.574ENSPPAG00000025861CSDE110098.574Pan_paniscus
ENSPCAG00000014368CSDE19698.574ENSPPRG00000006747CSDE110098.574Panthera_pardus
ENSPCAG00000014368CSDE19698.574ENSPTIG00000015468CSDE1100100.000Panthera_tigris_altaica
ENSPCAG00000014368CSDE19698.574ENSPTRG00000033721CSDE110099.029Pan_troglodytes
ENSPCAG00000014368CSDE19698.574ENSPANG00000018873CSDE110098.574Papio_anubis
ENSPCAG00000014368CSDE19474.252ENSPKIG00000009459csde110074.252Paramormyrops_kingsleyae
ENSPCAG00000014368CSDE18798.058ENSPSIG00000003823CSDE19698.058Pelodiscus_sinensis
ENSPCAG00000014368CSDE19474.675ENSPMGG00000000772csde110074.675Periophthalmus_magnuspinnatus
ENSPCAG00000014368CSDE19098.257ENSPEMG00000020357-10098.257Peromyscus_maniculatus_bairdii
ENSPCAG00000014368CSDE19695.563ENSPCIG00000022587CSDE110098.058Phascolarctos_cinereus
ENSPCAG00000014368CSDE17875.549ENSPFOG00000012664csde110076.019Poecilia_formosa
ENSPCAG00000014368CSDE17671.036ENSPLAG00000017680csde19371.036Poecilia_latipinna
ENSPCAG00000014368CSDE17671.197ENSPMEG00000005094csde19571.197Poecilia_mexicana
ENSPCAG00000014368CSDE19083.495ENSPREG00000011631csde110083.495Poecilia_reticulata
ENSPCAG00000014368CSDE19099.029ENSPPYG00000000996CSDE110099.029Pongo_abelii
ENSPCAG00000014368CSDE18087.069ENSPCOG00000008223-8687.069Propithecus_coquereli
ENSPCAG00000014368CSDE190100.000ENSPCOG00000017893CSDE1100100.000Propithecus_coquereli
ENSPCAG00000014368CSDE110087.808ENSPVAG00000008225CSDE110087.315Pteropus_vampyrus
ENSPCAG00000014368CSDE19083.495ENSPNYG00000013745csde110083.495Pundamilia_nyererei
ENSPCAG00000014368CSDE19577.129ENSPNAG00000001958csde19683.178Pygocentrus_nattereri
ENSPCAG00000014368CSDE19098.098ENSRNOG00000061058Csde110098.098Rattus_norvegicus
ENSPCAG00000014368CSDE110087.730ENSRBIG00000038966-10093.289Rhinopithecus_bieti
ENSPCAG00000014368CSDE19195.327ENSRBIG00000038088-9996.313Rhinopithecus_bieti
ENSPCAG00000014368CSDE19698.574ENSRROG00000043101CSDE110098.574Rhinopithecus_roxellana
ENSPCAG00000014368CSDE19698.257ENSSBOG00000035592CSDE110098.257Saimiri_boliviensis_boliviensis
ENSPCAG00000014368CSDE110090.441ENSSHAG00000009831CSDE110091.656Sarcophilus_harrisii
ENSPCAG00000014368CSDE19477.251ENSSFOG00015007498csde110079.612Scleropages_formosus
ENSPCAG00000014368CSDE19083.495ENSSMAG00000007203csde110083.495Scophthalmus_maximus
ENSPCAG00000014368CSDE19477.603ENSSDUG00000015380csde19683.178Seriola_dumerili
ENSPCAG00000014368CSDE19083.495ENSSLDG00000008819csde110083.495Seriola_lalandi_dorsalis
ENSPCAG00000014368CSDE110092.015ENSSARG00000000738CSDE110092.015Sorex_araneus
ENSPCAG00000014368CSDE19098.058ENSSPUG00000008714CSDE110098.058Sphenodon_punctatus
ENSPCAG00000014368CSDE19577.129ENSSPAG00000000716csde19684.112Stegastes_partitus
ENSPCAG00000014368CSDE19698.574ENSSSCG00000006752CSDE110098.574Sus_scrofa
ENSPCAG00000014368CSDE19097.087ENSTGUG00000000972CSDE110097.087Taeniopygia_guttata
ENSPCAG00000014368CSDE19472.302ENSTRUG00000007996csde110072.302Takifugu_rubripes
ENSPCAG00000014368CSDE18389.583ENSTNIG00000010878csde110089.583Tetraodon_nigroviridis
ENSPCAG00000014368CSDE19398.718ENSTBEG00000011880-6798.718Tupaia_belangeri
ENSPCAG00000014368CSDE110092.251ENSTTRG00000015583CSDE110092.743Tursiops_truncatus
ENSPCAG00000014368CSDE17999.635ENSUAMG00000021779-9799.635Ursus_americanus
ENSPCAG00000014368CSDE17889.211ENSUAMG00000024289-9989.211Ursus_americanus
ENSPCAG00000014368CSDE19586.641ENSUMAG00000009720-9886.641Ursus_maritimus
ENSPCAG00000014368CSDE17698.100ENSUMAG00000011714-9998.100Ursus_maritimus
ENSPCAG00000014368CSDE110097.183ENSVPAG00000000749CSDE18597.183Vicugna_pacos
ENSPCAG00000014368CSDE183100.000ENSVVUG00000009890CSDE194100.000Vulpes_vulpes
ENSPCAG00000014368CSDE19095.146ENSXETG00000021448csde110095.146Xenopus_tropicalis
ENSPCAG00000014368CSDE18785.455ENSXCOG00000000035csde19985.455Xiphophorus_couchianus
ENSPCAG00000014368CSDE19083.495ENSXMAG00000009080csde110083.495Xiphophorus_maculatus

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