EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000014514 (Gene tree)
Gene ID: -
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 81610 bases
Position: chrGeneScaffold_4435:87049-168658
Accession: 13995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000013598	zf-C2H2	PF00096.26	6.9e-24	1	4
ENSPCAP00000013598	zf-C2H2	PF00096.26	6.9e-24	2	4
ENSPCAP00000013598	zf-C2H2	PF00096.26	6.9e-24	3	4
ENSPCAP00000013598	zf-C2H2	PF00096.26	6.9e-24	4	4
ENSPCAP00000013598	zf-met	PF12874.7	3.3e-06	1	2
ENSPCAP00000013598	zf-met	PF12874.7	3.3e-06	2	2
ENSPCAP00000013598	zf-C2H2_jaz	PF12171.8	4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000014552	PRDM10-201	3015	-	ENSPCAP00000013598	1005 (aa)	-	UPI00018B0404

Gene Model

Click here to download ENSPCAG00000014514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000014514's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000014514	PRDM10	61	30.120	ENSPCAG00000009987	PRDM4	52	30.612

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000014514	PRDM10	99	85.888	ENSG00000170325	PRDM10	93	87.035	Homo_sapiens
ENSPCAG00000014514	PRDM10	100	80.863	ENSAMEG00000002425	PRDM10	93	80.269	Ailuropoda_melanoleuca
ENSPCAG00000014514	PRDM10	99	77.601	ENSAPLG00000004858	PRDM10	92	77.167	Anas_platyrhynchos
ENSPCAG00000014514	PRDM10	100	75.267	ENSANAG00000022064	PRDM10	92	76.968	Aotus_nancymaae
ENSPCAG00000014514	PRDM10	100	83.287	ENSBTAG00000019001	PRDM10	92	83.007	Bos_taurus
ENSPCAG00000014514	PRDM10	100	85.247	ENSCJAG00000009235	PRDM10	92	84.967	Callithrix_jacchus
ENSPCAG00000014514	PRDM10	100	84.972	ENSCAFG00000010164	PRDM10	92	85.000	Canis_familiaris
ENSPCAG00000014514	PRDM10	92	94.545	ENSCAFG00020010152	PRDM10	88	94.545	Canis_lupus_dingo
ENSPCAG00000014514	PRDM10	100	83.380	ENSCHIG00000026530	PRDM10	92	83.100	Capra_hircus
ENSPCAG00000014514	PRDM10	100	86.461	ENSTSYG00000000544	PRDM10	92	86.461	Carlito_syrichta
ENSPCAG00000014514	PRDM10	92	96.364	ENSCAPG00000017296	PRDM10	90	96.364	Cavia_aperea
ENSPCAG00000014514	PRDM10	92	96.364	ENSCPOG00000000389	PRDM10	88	96.364	Cavia_porcellus
ENSPCAG00000014514	PRDM10	100	84.874	ENSCCAG00000024567	PRDM10	92	84.874	Cebus_capucinus
ENSPCAG00000014514	PRDM10	100	85.528	ENSCATG00000040031	PRDM10	92	85.528	Cercocebus_atys
ENSPCAG00000014514	PRDM10	92	94.545	ENSCLAG00000014605	PRDM10	91	94.545	Chinchilla_lanigera
ENSPCAG00000014514	PRDM10	100	85.434	ENSCSAG00000002202	PRDM10	92	85.434	Chlorocebus_sabaeus
ENSPCAG00000014514	PRDM10	92	82.737	ENSCPBG00000026880	PRDM10	90	82.316	Chrysemys_picta_bellii
ENSPCAG00000014514	PRDM10	99	85.794	ENSCANG00000032669	PRDM10	92	85.327	Colobus_angolensis_palliatus
ENSPCAG00000014514	PRDM10	93	94.545	ENSCGRG00001021647	Prdm10	90	94.545	Cricetulus_griseus_chok1gshd
ENSPCAG00000014514	PRDM10	93	94.545	ENSCGRG00000006562	Prdm10	90	94.545	Cricetulus_griseus_crigri
ENSPCAG00000014514	PRDM10	86	83.548	ENSDNOG00000001366	PRDM10	93	83.548	Dasypus_novemcinctus
ENSPCAG00000014514	PRDM10	100	83.754	ENSDORG00000014292	Prdm10	93	85.385	Dipodomys_ordii
ENSPCAG00000014514	PRDM10	92	94.545	ENSEASG00005022914	PRDM10	90	94.545	Equus_asinus_asinus
ENSPCAG00000014514	PRDM10	92	94.545	ENSECAG00000011499	PRDM10	90	94.545	Equus_caballus
ENSPCAG00000014514	PRDM10	100	84.594	ENSFCAG00000004111	PRDM10	90	84.623	Felis_catus
ENSPCAG00000014514	PRDM10	99	72.924	ENSFALG00000004873	PRDM10	92	72.883	Ficedula_albicollis
ENSPCAG00000014514	PRDM10	92	96.364	ENSFDAG00000017311	PRDM10	89	96.364	Fukomys_damarensis
ENSPCAG00000014514	PRDM10	99	77.788	ENSGALG00000033660	PRDM10	95	77.788	Gallus_gallus
ENSPCAG00000014514	PRDM10	92	66.071	ENSGACG00000012293	prdm10	90	66.071	Gasterosteus_aculeatus
ENSPCAG00000014514	PRDM10	99	75.791	ENSGAGG00000012523	PRDM10	91	75.791	Gopherus_agassizii
ENSPCAG00000014514	PRDM10	99	85.621	ENSGGOG00000015359	PRDM10	92	85.901	Gorilla_gorilla
ENSPCAG00000014514	PRDM10	92	96.364	ENSHGLG00000001106	PRDM10	89	96.364	Heterocephalus_glaber_female
ENSPCAG00000014514	PRDM10	92	96.364	ENSHGLG00100002350	PRDM10	89	96.364	Heterocephalus_glaber_male
ENSPCAG00000014514	PRDM10	100	85.528	ENSSTOG00000002015	PRDM10	92	85.528	Ictidomys_tridecemlineatus
ENSPCAG00000014514	PRDM10	85	80.535	ENSJJAG00000021493	Prdm10	88	80.189	Jaculus_jaculus
ENSPCAG00000014514	PRDM10	100	83.706	ENSLAFG00000031867	PRDM10	92	83.520	Loxodonta_africana
ENSPCAG00000014514	PRDM10	100	85.621	ENSMFAG00000031008	PRDM10	92	85.621	Macaca_fascicularis
ENSPCAG00000014514	PRDM10	100	85.621	ENSMMUG00000017555	PRDM10	92	85.621	Macaca_mulatta
ENSPCAG00000014514	PRDM10	100	85.528	ENSMNEG00000036493	PRDM10	92	85.528	Macaca_nemestrina
ENSPCAG00000014514	PRDM10	94	81.466	ENSMLEG00000042028	PRDM10	91	87.261	Mandrillus_leucophaeus
ENSPCAG00000014514	PRDM10	99	73.803	ENSMGAG00000001112	PRDM10	93	75.158	Meleagris_gallopavo
ENSPCAG00000014514	PRDM10	100	85.061	ENSMICG00000013888	PRDM10	92	85.061	Microcebus_murinus
ENSPCAG00000014514	PRDM10	100	81.165	ENSMOCG00000021853	Prdm10	91	94.231	Microtus_ochrogaster
ENSPCAG00000014514	PRDM10	76	80.859	ENSMODG00000004979	PRDM10	92	80.736	Monodelphis_domestica
ENSPCAG00000014514	PRDM10	92	94.545	ENSMUSG00000042496	Prdm10	88	94.545	Mus_musculus
ENSPCAG00000014514	PRDM10	92	94.545	MGP_SPRETEiJ_G0033061	-	88	94.545	Mus_spretus
ENSPCAG00000014514	PRDM10	99	84.766	ENSMPUG00000008711	PRDM10	91	84.795	Mustela_putorius_furo
ENSPCAG00000014514	PRDM10	100	84.127	ENSMLUG00000013051	PRDM10	92	84.063	Myotis_lucifugus
ENSPCAG00000014514	PRDM10	100	84.500	ENSNGAG00000000580	Prdm10	93	86.660	Nannospalax_galili
ENSPCAG00000014514	PRDM10	99	85.701	ENSNLEG00000007488	PRDM10	92	85.701	Nomascus_leucogenys
ENSPCAG00000014514	PRDM10	92	94.545	ENSODEG00000005309	PRDM10	91	94.545	Octodon_degus
ENSPCAG00000014514	PRDM10	99	72.652	ENSOANG00000000577	-	92	71.547	Ornithorhynchus_anatinus
ENSPCAG00000014514	PRDM10	99	83.458	ENSOCUG00000003736	PRDM10	92	83.458	Oryctolagus_cuniculus
ENSPCAG00000014514	PRDM10	100	84.407	ENSOGAG00000010723	PRDM10	92	84.127	Otolemur_garnettii
ENSPCAG00000014514	PRDM10	100	83.473	ENSOARG00000014507	PRDM10	92	83.193	Ovis_aries
ENSPCAG00000014514	PRDM10	99	85.434	ENSPPAG00000042881	PRDM10	92	85.714	Pan_paniscus
ENSPCAG00000014514	PRDM10	100	84.687	ENSPPRG00000007002	PRDM10	92	84.716	Panthera_pardus
ENSPCAG00000014514	PRDM10	100	84.781	ENSPTIG00000013331	PRDM10	92	84.809	Panthera_tigris_altaica
ENSPCAG00000014514	PRDM10	99	85.621	ENSPTRG00000004477	PRDM10	92	85.901	Pan_troglodytes
ENSPCAG00000014514	PRDM10	100	85.528	ENSPANG00000017470	PRDM10	92	85.528	Papio_anubis
ENSPCAG00000014514	PRDM10	93	96.364	ENSPEMG00000014985	Prdm10	90	96.364	Peromyscus_maniculatus_bairdii
ENSPCAG00000014514	PRDM10	99	85.981	ENSPPYG00000004061	PRDM10	92	85.981	Pongo_abelii
ENSPCAG00000014514	PRDM10	100	76.023	ENSPCOG00000023406	PRDM10	92	75.899	Propithecus_coquereli
ENSPCAG00000014514	PRDM10	100	85.341	ENSPVAG00000012764	PRDM10	92	85.555	Pteropus_vampyrus
ENSPCAG00000014514	PRDM10	99	83.209	ENSRNOG00000007853	Prdm10	92	82.369	Rattus_norvegicus
ENSPCAG00000014514	PRDM10	99	85.794	ENSRBIG00000030924	PRDM10	92	85.794	Rhinopithecus_bieti
ENSPCAG00000014514	PRDM10	99	85.794	ENSRROG00000034334	PRDM10	92	85.794	Rhinopithecus_roxellana
ENSPCAG00000014514	PRDM10	100	85.434	ENSSBOG00000008773	PRDM10	92	85.434	Saimiri_boliviensis_boliviensis
ENSPCAG00000014514	PRDM10	99	80.000	ENSSHAG00000004503	PRDM10	92	79.721	Sarcophilus_harrisii
ENSPCAG00000014514	PRDM10	60	100.000	ENSSARG00000013953	-	53	100.000	Sorex_araneus
ENSPCAG00000014514	PRDM10	99	76.226	ENSSPUG00000001178	PRDM10	91	77.822	Sphenodon_punctatus
ENSPCAG00000014514	PRDM10	100	82.977	ENSSSCG00000015243	PRDM10	98	82.312	Sus_scrofa
ENSPCAG00000014514	PRDM10	99	77.196	ENSTGUG00000000530	PRDM10	92	77.196	Taeniopygia_guttata
ENSPCAG00000014514	PRDM10	97	75.241	ENSTBEG00000007221	PRDM10	90	75.241	Tupaia_belangeri
ENSPCAG00000014514	PRDM10	100	82.353	ENSTTRG00000009189	PRDM10	92	82.073	Tursiops_truncatus
ENSPCAG00000014514	PRDM10	89	92.727	ENSUAMG00000018832	PRDM10	90	92.727	Ursus_americanus
ENSPCAG00000014514	PRDM10	92	92.727	ENSUMAG00000003167	PRDM10	89	92.727	Ursus_maritimus
ENSPCAG00000014514	PRDM10	100	84.781	ENSVVUG00000019878	PRDM10	92	84.809	Vulpes_vulpes
ENSPCAG00000014514	PRDM10	93	72.727	ENSXETG00000032173	PRDM10	82	72.727	Xenopus_tropicalis