EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPCAG00000015042 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Procavia_capensis
Status
putative
Strand
Plus strand
Length
44018 bases
Position
chrGeneScaffold_2396:88-44105
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPCAP00000014079Beta-CaspPF10996.81.6e-3311
ENSPCAP00000014079Lactamase_BPF00753.273.1e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPCAT00000015059CPSF3-2011938-ENSPCAP00000014079646 (aa)-UPI00018AE554
Gene Model
Click here to download ENSPCAG00000015042's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000015042's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPCAG00000015042CPSF310063.748ENSG00000119203CPSF39999.259Homo_sapiens
ENSPCAG00000015042CPSF38965.160ENSAPOG00000022087cpsf38565.160Acanthochromis_polyacanthus
ENSPCAG00000015042CPSF37170.779ENSAPOG00000012241CPSF38173.536Acanthochromis_polyacanthus
ENSPCAG00000015042CPSF310064.209ENSAMEG00000008493CPSF39564.209Ailuropoda_melanoleuca
ENSPCAG00000015042CPSF38165.073ENSACIG00000023663CPSF38365.073Amphilophus_citrinellus
ENSPCAG00000015042CPSF37364.301ENSACIG00000009846cpsf37664.301Amphilophus_citrinellus
ENSPCAG00000015042CPSF38965.913ENSAOCG00000010077CPSF38465.913Amphiprion_ocellaris
ENSPCAG00000015042CPSF38965.160ENSAOCG00000022056cpsf38565.160Amphiprion_ocellaris
ENSPCAG00000015042CPSF38965.160ENSAPEG00000019526cpsf38865.160Amphiprion_percula
ENSPCAG00000015042CPSF38965.913ENSAPEG00000021167CPSF38665.913Amphiprion_percula
ENSPCAG00000015042CPSF37170.779ENSATEG00000014525CPSF37070.779Anabas_testudineus
ENSPCAG00000015042CPSF38864.906ENSATEG00000003959cpsf38464.906Anabas_testudineus
ENSPCAG00000015042CPSF39463.785ENSAPLG00000006941CPSF39063.785Anas_platyrhynchos
ENSPCAG00000015042CPSF39261.462ENSACAG00000001759CPSF39561.462Anolis_carolinensis
ENSPCAG00000015042CPSF39089.091ENSANAG00000031254CPSF38789.091Aotus_nancymaae
ENSPCAG00000015042CPSF39157.358ENSACLG00000018846CPSF39457.358Astatotilapia_calliptera
ENSPCAG00000015042CPSF39061.717ENSACLG00000014484cpsf38366.935Astatotilapia_calliptera
ENSPCAG00000015042CPSF38966.414ENSAMXG00000004786cpsf38268.750Astyanax_mexicanus
ENSPCAG00000015042CPSF310064.209ENSBTAG00000019735CPSF39564.209Bos_taurus
ENSPCAG00000015042CPSF38146.226WBGene00013460cpsf-37546.226Caenorhabditis_elegans
ENSPCAG00000015042CPSF310063.594ENSCJAG00000006276CPSF39563.594Callithrix_jacchus
ENSPCAG00000015042CPSF310064.209ENSCAFG00000003375CPSF39164.209Canis_familiaris
ENSPCAG00000015042CPSF39562.682ENSCAFG00020026799CPSF310062.682Canis_lupus_dingo
ENSPCAG00000015042CPSF310064.209ENSCHIG00000013973CPSF39564.209Capra_hircus
ENSPCAG00000015042CPSF310063.748ENSTSYG00000002967CPSF39563.748Carlito_syrichta
ENSPCAG00000015042CPSF39464.274ENSCAPG00000013851CPSF39264.274Cavia_aperea
ENSPCAG00000015042CPSF310063.134ENSCPOG00000011299CPSF39563.134Cavia_porcellus
ENSPCAG00000015042CPSF310063.594ENSCCAG00000036730CPSF39563.594Cebus_capucinus
ENSPCAG00000015042CPSF39088.462ENSCATG00000014770CPSF38888.462Cercocebus_atys
ENSPCAG00000015042CPSF310062.980ENSCLAG00000002727CPSF39562.980Chinchilla_lanigera
ENSPCAG00000015042CPSF38480.449ENSCSAG00000007125CPSF38780.449Chlorocebus_sabaeus
ENSPCAG00000015042CPSF35784.064ENSCHOG00000000180CPSF35584.064Choloepus_hoffmanni
ENSPCAG00000015042CPSF39962.809ENSCPBG00000014074CPSF39462.809Chrysemys_picta_bellii
ENSPCAG00000015042CPSF38152.741ENSCING00000007214-7652.741Ciona_intestinalis
ENSPCAG00000015042CPSF38787.500ENSCANG00000034435CPSF38487.500Colobus_angolensis_palliatus
ENSPCAG00000015042CPSF310063.594ENSCGRG00001013134Cpsf39563.594Cricetulus_griseus_chok1gshd
ENSPCAG00000015042CPSF310063.594ENSCGRG00000018319Cpsf39563.594Cricetulus_griseus_crigri
ENSPCAG00000015042CPSF38965.348ENSCSEG00000002021CPSF38467.742Cynoglossus_semilaevis
ENSPCAG00000015042CPSF38965.913ENSCVAG00000015067CPSF38465.913Cyprinodon_variegatus
ENSPCAG00000015042CPSF39066.478ENSDARG00000027649cpsf38566.478Danio_rerio
ENSPCAG00000015042CPSF310063.650ENSDNOG00000008940CPSF39163.650Dasypus_novemcinctus
ENSPCAG00000015042CPSF310063.902ENSDORG00000014263Cpsf310063.902Dipodomys_ordii
ENSPCAG00000015042CPSF37954.264FBgn0261065Cpsf737753.208Drosophila_melanogaster
ENSPCAG00000015042CPSF310069.432ENSETEG00000003893CPSF310069.432Echinops_telfairi
ENSPCAG00000015042CPSF38161.698ENSEBUG00000009018cpsf37561.698Eptatretus_burgeri
ENSPCAG00000015042CPSF310064.209ENSEASG00005003970CPSF39564.209Equus_asinus_asinus
ENSPCAG00000015042CPSF310064.209ENSECAG00000019911CPSF39564.209Equus_caballus
ENSPCAG00000015042CPSF310062.980ENSEEUG00000015422CPSF39562.980Erinaceus_europaeus
ENSPCAG00000015042CPSF38865.725ENSELUG00000013775cpsf38664.403Esox_lucius
ENSPCAG00000015042CPSF310064.209ENSFCAG00000007852CPSF39565.416Felis_catus
ENSPCAG00000015042CPSF39463.458ENSFALG00000006572CPSF39563.458Ficedula_albicollis
ENSPCAG00000015042CPSF310062.980ENSFDAG00000006317CPSF39462.980Fukomys_damarensis
ENSPCAG00000015042CPSF38964.528ENSFHEG00000014774cpsf38464.528Fundulus_heteroclitus
ENSPCAG00000015042CPSF38164.783ENSGMOG00000003157cpsf37764.783Gadus_morhua
ENSPCAG00000015042CPSF39961.574ENSGALG00000016424CPSF39562.126Gallus_gallus
ENSPCAG00000015042CPSF38965.913ENSGAFG00000008016CPSF38465.913Gambusia_affinis
ENSPCAG00000015042CPSF38163.466ENSGAFG00000019449cpsf38463.466Gambusia_affinis
ENSPCAG00000015042CPSF36355.257ENSGAGG00000025583CPSF38155.257Gopherus_agassizii
ENSPCAG00000015042CPSF310062.162ENSGGOG00000001757CPSF39172.043Gorilla_gorilla
ENSPCAG00000015042CPSF39064.728ENSHBUG00000001188cpsf38664.728Haplochromis_burtoni
ENSPCAG00000015042CPSF310062.366ENSHGLG00000000666CPSF39462.366Heterocephalus_glaber_female
ENSPCAG00000015042CPSF310062.366ENSHGLG00100007765CPSF39462.366Heterocephalus_glaber_male
ENSPCAG00000015042CPSF38964.353ENSHCOG00000007251cpsf38564.353Hippocampus_comes
ENSPCAG00000015042CPSF38965.348ENSHCOG00000015957CPSF38365.348Hippocampus_comes
ENSPCAG00000015042CPSF39065.283ENSIPUG00000023488cpsf38565.283Ictalurus_punctatus
ENSPCAG00000015042CPSF310064.055ENSSTOG00000004476CPSF39564.055Ictidomys_tridecemlineatus
ENSPCAG00000015042CPSF310063.134ENSJJAG00000023415Cpsf39563.134Jaculus_jaculus
ENSPCAG00000015042CPSF38965.537ENSKMAG00000007317CPSF38465.537Kryptolebias_marmoratus
ENSPCAG00000015042CPSF38964.717ENSKMAG00000002806cpsf38464.717Kryptolebias_marmoratus
ENSPCAG00000015042CPSF38162.476ENSLBEG00000020569cpsf37762.476Labrus_bergylta
ENSPCAG00000015042CPSF38965.725ENSLBEG00000013492CPSF38865.725Labrus_bergylta
ENSPCAG00000015042CPSF39066.478ENSLACG00000008308CPSF38566.478Latimeria_chalumnae
ENSPCAG00000015042CPSF38965.849ENSLOCG00000016823cpsf38365.849Lepisosteus_oculatus
ENSPCAG00000015042CPSF39466.069ENSLAFG00000009467CPSF39066.069Loxodonta_africana
ENSPCAG00000015042CPSF310063.748ENSMFAG00000001339CPSF39172.043Macaca_fascicularis
ENSPCAG00000015042CPSF39464.927ENSMMUG00000018038CPSF38972.043Macaca_mulatta
ENSPCAG00000015042CPSF39175.889ENSMNEG00000039447CPSF39575.889Macaca_nemestrina
ENSPCAG00000015042CPSF310063.902ENSMLEG00000026825CPSF39272.043Mandrillus_leucophaeus
ENSPCAG00000015042CPSF38164.865ENSMAMG00000008835CPSF38464.865Mastacembelus_armatus
ENSPCAG00000015042CPSF38164.717ENSMAMG00000003076cpsf38464.717Mastacembelus_armatus
ENSPCAG00000015042CPSF38966.102ENSMZEG00005006258CPSF39457.358Maylandia_zebra
ENSPCAG00000015042CPSF39064.728ENSMZEG00005014358cpsf38664.728Maylandia_zebra
ENSPCAG00000015042CPSF39462.643ENSMGAG00000013995CPSF39262.643Meleagris_gallopavo
ENSPCAG00000015042CPSF35247.522ENSMAUG00000000166Cpsf39147.522Mesocricetus_auratus
ENSPCAG00000015042CPSF39090.909ENSMICG00000002363CPSF38890.909Microcebus_murinus
ENSPCAG00000015042CPSF39561.974ENSMOCG00000020067Cpsf39561.974Microtus_ochrogaster
ENSPCAG00000015042CPSF35060.736ENSMMOG00000011923CPSF37754.545Mola_mola
ENSPCAG00000015042CPSF37666.734ENSMMOG00000018212CPSF37866.734Mola_mola
ENSPCAG00000015042CPSF39083.636ENSMODG00000014703CPSF38583.636Monodelphis_domestica
ENSPCAG00000015042CPSF37465.102ENSMALG00000011474CPSF37965.102Monopterus_albus
ENSPCAG00000015042CPSF38965.414ENSMALG00000016416cpsf38565.414Monopterus_albus
ENSPCAG00000015042CPSF310063.441MGP_CAROLIEiJ_G0017640Cpsf39563.441Mus_caroli
ENSPCAG00000015042CPSF310063.441ENSMUSG00000054309Cpsf39481.498Mus_musculus
ENSPCAG00000015042CPSF310063.441MGP_PahariEiJ_G0029397Cpsf39563.441Mus_pahari
ENSPCAG00000015042CPSF310063.441MGP_SPRETEiJ_G0018481Cpsf39563.441Mus_spretus
ENSPCAG00000015042CPSF310063.902ENSMPUG00000013213CPSF39563.902Mustela_putorius_furo
ENSPCAG00000015042CPSF39089.091ENSMLUG00000010636CPSF38689.091Myotis_lucifugus
ENSPCAG00000015042CPSF310063.441ENSNGAG00000019836Cpsf39563.441Nannospalax_galili
ENSPCAG00000015042CPSF39064.850ENSNBRG00000004770cpsf38564.850Neolamprologus_brichardi
ENSPCAG00000015042CPSF39157.358ENSNBRG00000010525CPSF39457.358Neolamprologus_brichardi
ENSPCAG00000015042CPSF310063.748ENSNLEG00000013359CPSF39172.043Nomascus_leucogenys
ENSPCAG00000015042CPSF37456.712ENSMEUG00000013117-7056.712Notamacropus_eugenii
ENSPCAG00000015042CPSF310054.378ENSOPRG00000008902CPSF39554.378Ochotona_princeps
ENSPCAG00000015042CPSF310062.519ENSODEG00000003129CPSF39562.519Octodon_degus
ENSPCAG00000015042CPSF39064.728ENSONIG00000018812cpsf38664.728Oreochromis_niloticus
ENSPCAG00000015042CPSF38158.380ENSOANG00000008577CPSF39458.380Ornithorhynchus_anatinus
ENSPCAG00000015042CPSF310064.055ENSOCUG00000003728CPSF39564.055Oryctolagus_cuniculus
ENSPCAG00000015042CPSF38864.218ENSORLG00000018854cpsf38464.218Oryzias_latipes
ENSPCAG00000015042CPSF38864.218ENSORLG00020013331cpsf38464.218Oryzias_latipes_hni
ENSPCAG00000015042CPSF38864.218ENSORLG00015011017cpsf38464.218Oryzias_latipes_hsok
ENSPCAG00000015042CPSF38864.098ENSOMEG00000010647cpsf38064.098Oryzias_melastigma
ENSPCAG00000015042CPSF310059.908ENSOGAG00000001680CPSF39559.908Otolemur_garnettii
ENSPCAG00000015042CPSF310064.209ENSOARG00000015073CPSF39564.209Ovis_aries
ENSPCAG00000015042CPSF310063.902ENSPPAG00000042457CPSF39172.043Pan_paniscus
ENSPCAG00000015042CPSF310064.209ENSPPRG00000016790CPSF39565.416Panthera_pardus
ENSPCAG00000015042CPSF39963.988ENSPTIG00000003920CPSF39564.784Panthera_tigris_altaica
ENSPCAG00000015042CPSF310063.902ENSPTRG00000011638CPSF39172.043Pan_troglodytes
ENSPCAG00000015042CPSF310063.594ENSPANG00000016798CPSF39172.043Papio_anubis
ENSPCAG00000015042CPSF38968.750ENSPKIG00000023646cpsf38468.750Paramormyrops_kingsleyae
ENSPCAG00000015042CPSF39463.132ENSPSIG00000016144CPSF39063.132Pelodiscus_sinensis
ENSPCAG00000015042CPSF37363.883ENSPMGG00000006141-8363.883Periophthalmus_magnuspinnatus
ENSPCAG00000015042CPSF310062.826ENSPEMG00000017668Cpsf39562.826Peromyscus_maniculatus_bairdii
ENSPCAG00000015042CPSF38262.313ENSPMAG00000004841cpsf39962.313Petromyzon_marinus
ENSPCAG00000015042CPSF39464.274ENSPCIG00000009823CPSF39264.274Phascolarctos_cinereus
ENSPCAG00000015042CPSF38964.286ENSPFOG00000015922cpsf38564.286Poecilia_formosa
ENSPCAG00000015042CPSF38966.102ENSPFOG00000010418-8466.102Poecilia_formosa
ENSPCAG00000015042CPSF38964.286ENSPLAG00000000882cpsf38564.286Poecilia_latipinna
ENSPCAG00000015042CPSF38964.286ENSPMEG00000018309cpsf38564.286Poecilia_mexicana
ENSPCAG00000015042CPSF38163.466ENSPREG00000014875cpsf38463.466Poecilia_reticulata
ENSPCAG00000015042CPSF38965.913ENSPREG00000004482CPSF38965.913Poecilia_reticulata
ENSPCAG00000015042CPSF310062.058ENSPPYG00000012666CPSF39562.058Pongo_abelii
ENSPCAG00000015042CPSF37090.909ENSPCOG00000023016CPSF37690.909Propithecus_coquereli
ENSPCAG00000015042CPSF310064.055ENSPVAG00000005324CPSF39564.055Pteropus_vampyrus
ENSPCAG00000015042CPSF37365.281ENSPNYG00000021047CPSF38065.281Pundamilia_nyererei
ENSPCAG00000015042CPSF39064.728ENSPNYG00000004405cpsf38664.728Pundamilia_nyererei
ENSPCAG00000015042CPSF38966.414ENSPNAG00000023060cpsf38466.414Pygocentrus_nattereri
ENSPCAG00000015042CPSF310063.441ENSRNOG00000052418Cpsf39563.441Rattus_norvegicus
ENSPCAG00000015042CPSF310063.902ENSRBIG00000041615CPSF39465.090Rhinopithecus_bieti
ENSPCAG00000015042CPSF310063.902ENSRROG00000033792CPSF39563.902Rhinopithecus_roxellana
ENSPCAG00000015042CPSF39464.927ENSSBOG00000027263CPSF38964.927Saimiri_boliviensis_boliviensis
ENSPCAG00000015042CPSF310063.134ENSSHAG00000007024CPSF39563.134Sarcophilus_harrisii
ENSPCAG00000015042CPSF39066.353ENSSFOG00015002108cpsf38272.727Scleropages_formosus
ENSPCAG00000015042CPSF38165.537ENSSMAG00000020534CPSF37965.537Scophthalmus_maximus
ENSPCAG00000015042CPSF38965.725ENSSDUG00000018498CPSF38465.725Seriola_dumerili
ENSPCAG00000015042CPSF39064.850ENSSDUG00000002828cpsf38364.850Seriola_dumerili
ENSPCAG00000015042CPSF39064.850ENSSLDG00000008469cpsf38364.850Seriola_lalandi_dorsalis
ENSPCAG00000015042CPSF38965.725ENSSLDG00000005234CPSF38465.725Seriola_lalandi_dorsalis
ENSPCAG00000015042CPSF39089.091ENSSARG00000005186CPSF38689.091Sorex_araneus
ENSPCAG00000015042CPSF39461.102ENSSPUG00000015525CPSF39061.102Sphenodon_punctatus
ENSPCAG00000015042CPSF38965.348ENSSPAG00000018579cpsf38565.348Stegastes_partitus
ENSPCAG00000015042CPSF38965.725ENSSPAG00000002906CPSF38564.865Stegastes_partitus
ENSPCAG00000015042CPSF310064.055ENSSSCG00000020799CPSF39564.055Sus_scrofa
ENSPCAG00000015042CPSF39962.191ENSTGUG00000013016CPSF39562.191Taeniopygia_guttata
ENSPCAG00000015042CPSF38965.038ENSTRUG00000007030cpsf38365.038Takifugu_rubripes
ENSPCAG00000015042CPSF36196.875ENSTBEG00000002707CPSF36196.875Tupaia_belangeri
ENSPCAG00000015042CPSF37289.028ENSTTRG00000000861CPSF36889.028Tursiops_truncatus
ENSPCAG00000015042CPSF310064.209ENSUAMG00000007535CPSF39464.209Ursus_americanus
ENSPCAG00000015042CPSF39465.416ENSUMAG00000003676CPSF39565.416Ursus_maritimus
ENSPCAG00000015042CPSF38193.750ENSVPAG00000008041CPSF38393.750Vicugna_pacos
ENSPCAG00000015042CPSF310064.209ENSVVUG00000002194CPSF39564.209Vulpes_vulpes
ENSPCAG00000015042CPSF39959.692ENSXETG00000008263cpsf39459.692Xenopus_tropicalis
ENSPCAG00000015042CPSF38964.717ENSXCOG00000019695cpsf38564.717Xiphophorus_couchianus
ENSPCAG00000015042CPSF38182.320ENSXMAG00000027291CPSF37282.320Xiphophorus_maculatus
ENSPCAG00000015042CPSF38964.474ENSXMAG00000009784cpsf38566.667Xiphophorus_maculatus

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