EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000015518 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 32181 bases
Position: chrGeneScaffold_6411:26464-58644
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000014573	APOBEC_N	PF08210.11	2.4e-80	1	2
ENSPCAP00000014573	APOBEC_N	PF08210.11	2.4e-80	2	2
ENSPCAP00000014573	APOBEC_C	PF05240.14	1.3e-53	1	2
ENSPCAP00000014573	APOBEC_C	PF05240.14	1.3e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000015585	-	1380	-	ENSPCAP00000014573	459 (aa)	-	UPI00018AEE1F

Gene Model

Click here to download ENSPCAG00000015518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000015518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000015518	-	51	38.384	ENSPCAG00000008733	APOBEC1	74	38.384
ENSPCAG00000015518	-	57	64.885	ENSPCAG00000001848	-	99	64.885
ENSPCAG00000015518	-	76	36.022	ENSPCAG00000015655	-	99	36.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000015518	-	76	44.986	ENSG00000239713	APOBEC3G	96	44.986	Homo_sapiens
ENSPCAG00000015518	-	64	48.958	ENSAMEG00000010815	-	88	48.039	Ailuropoda_melanoleuca
ENSPCAG00000015518	-	67	45.963	ENSANAG00000031271	APOBEC3G	97	45.963	Aotus_nancymaae
ENSPCAG00000015518	-	76	40.934	ENSANAG00000028416	-	97	40.599	Aotus_nancymaae
ENSPCAG00000015518	-	77	54.255	ENSANAG00000020573	-	95	54.255	Aotus_nancymaae
ENSPCAG00000015518	-	74	38.889	ENSANAG00000027961	-	99	38.889	Aotus_nancymaae
ENSPCAG00000015518	-	63	47.619	ENSBTAG00000037800	-	100	46.073	Bos_taurus
ENSPCAG00000015518	-	75	50.532	ENSCJAG00000011578	-	76	50.532	Callithrix_jacchus
ENSPCAG00000015518	-	76	41.417	ENSCJAG00000023368	APOBEC3G	97	41.417	Callithrix_jacchus
ENSPCAG00000015518	-	54	43.548	ENSCAFG00000023589	-	89	43.548	Canis_familiaris
ENSPCAG00000015518	-	67	39.801	ENSCAFG00000015211	-	98	39.801	Canis_familiaris
ENSPCAG00000015518	-	66	42.400	ENSCAFG00020002641	-	81	42.400	Canis_lupus_dingo
ENSPCAG00000015518	-	83	38.298	ENSCAFG00020002661	-	80	42.400	Canis_lupus_dingo
ENSPCAG00000015518	-	68	46.000	ENSCHIG00000012694	-	97	46.000	Capra_hircus
ENSPCAG00000015518	-	77	53.439	ENSCCAG00000030928	-	92	53.439	Cebus_capucinus
ENSPCAG00000015518	-	77	46.933	ENSCCAG00000033147	-	95	47.200	Cebus_capucinus
ENSPCAG00000015518	-	76	40.960	ENSCCAG00000032232	-	97	40.390	Cebus_capucinus
ENSPCAG00000015518	-	76	39.946	ENSCCAG00000032509	-	98	39.946	Cebus_capucinus
ENSPCAG00000015518	-	75	44.838	ENSCSAG00000006376	APOBEC3G	84	44.838	Chlorocebus_sabaeus
ENSPCAG00000015518	-	72	41.525	ENSCANG00000029968	-	72	41.525	Colobus_angolensis_palliatus
ENSPCAG00000015518	-	83	37.500	ENSDNOG00000039749	-	83	40.909	Dasypus_novemcinctus
ENSPCAG00000015518	-	69	48.585	ENSEASG00005018643	-	81	50.000	Equus_asinus_asinus
ENSPCAG00000015518	-	81	45.756	ENSECAG00000032756	-	68	50.000	Equus_caballus
ENSPCAG00000015518	-	69	47.887	ENSECAG00000022371	APOBEC3Z1B	87	49.000	Equus_caballus
ENSPCAG00000015518	-	78	44.818	ENSGGOG00000013750	APOBEC3G	95	44.818	Gorilla_gorilla
ENSPCAG00000015518	-	78	48.529	ENSLAFG00000008890	-	90	51.872	Loxodonta_africana
ENSPCAG00000015518	-	64	62.703	ENSLAFG00000005275	-	99	62.703	Loxodonta_africana
ENSPCAG00000015518	-	67	50.610	ENSLAFG00000020906	-	94	50.765	Loxodonta_africana
ENSPCAG00000015518	-	76	46.866	ENSMFAG00000044711	APOBEC3G	87	46.866	Macaca_fascicularis
ENSPCAG00000015518	-	75	46.575	ENSMMUG00000039346	APOBEC3G	95	44.986	Macaca_mulatta
ENSPCAG00000015518	-	76	47.139	ENSMNEG00000038847	APOBEC3G	93	47.500	Macaca_nemestrina
ENSPCAG00000015518	-	76	47.554	ENSMLEG00000024444	APOBEC3G	92	47.802	Mandrillus_leucophaeus
ENSPCAG00000015518	-	75	56.216	ENSMICG00000047191	-	98	56.216	Microcebus_murinus
ENSPCAG00000015518	-	75	60.963	ENSMICG00000043748	-	92	60.963	Microcebus_murinus
ENSPCAG00000015518	-	63	48.901	ENSMPUG00000013235	-	93	48.901	Mustela_putorius_furo
ENSPCAG00000015518	-	66	48.404	ENSMLUG00000023022	-	88	48.469	Myotis_lucifugus
ENSPCAG00000015518	-	67	54.688	ENSMLUG00000008631	-	98	54.688	Myotis_lucifugus
ENSPCAG00000015518	-	63	50.549	ENSMLUG00000000517	-	100	50.549	Myotis_lucifugus
ENSPCAG00000015518	-	66	50.270	ENSMLUG00000014565	-	98	50.270	Myotis_lucifugus
ENSPCAG00000015518	-	66	50.811	ENSMLUG00000000977	-	97	50.811	Myotis_lucifugus
ENSPCAG00000015518	-	61	44.408	ENSMLUG00000024853	-	93	44.408	Myotis_lucifugus
ENSPCAG00000015518	-	61	49.296	ENSMLUG00000026771	-	73	49.296	Myotis_lucifugus
ENSPCAG00000015518	-	66	48.404	ENSMLUG00000024957	-	89	48.469	Myotis_lucifugus
ENSPCAG00000015518	-	63	46.591	ENSMLUG00000028652	-	84	44.330	Myotis_lucifugus
ENSPCAG00000015518	-	73	36.932	ENSNLEG00000018922	-	99	38.418	Nomascus_leucogenys
ENSPCAG00000015518	-	76	51.087	ENSOPRG00000002326	-	100	51.087	Ochotona_princeps
ENSPCAG00000015518	-	59	51.744	ENSOCUG00000023532	-	74	51.744	Oryctolagus_cuniculus
ENSPCAG00000015518	-	77	53.061	ENSOGAG00000024822	-	96	53.061	Otolemur_garnettii
ENSPCAG00000015518	-	66	59.259	ENSOGAG00000032518	-	98	59.259	Otolemur_garnettii
ENSPCAG00000015518	-	67	45.596	ENSOARG00000016213	APOBEC3Z1	100	45.596	Ovis_aries
ENSPCAG00000015518	-	71	46.041	ENSPPAG00000033277	-	90	43.583	Pan_paniscus
ENSPCAG00000015518	-	76	44.986	ENSPTRG00000014387	APOBEC3G	96	44.986	Pan_troglodytes
ENSPCAG00000015518	-	77	43.617	ENSPPYG00000011833	APOBEC3G	94	43.617	Pongo_abelii
ENSPCAG00000015518	-	64	54.011	ENSPCOG00000016357	-	92	54.011	Propithecus_coquereli
ENSPCAG00000015518	-	64	53.476	ENSPVAG00000004045	-	93	53.476	Pteropus_vampyrus
ENSPCAG00000015518	-	67	49.062	ENSRBIG00000035436	APOBEC3G	97	46.218	Rhinopithecus_bieti
ENSPCAG00000015518	-	76	37.778	ENSSBOG00000025673	-	99	37.778	Saimiri_boliviensis_boliviensis
ENSPCAG00000015518	-	94	42.484	ENSSBOG00000023468	-	83	42.677	Saimiri_boliviensis_boliviensis
ENSPCAG00000015518	-	77	53.476	ENSSBOG00000029091	-	92	53.476	Saimiri_boliviensis_boliviensis
ENSPCAG00000015518	-	75	48.065	ENSSBOG00000018208	-	99	48.065	Saimiri_boliviensis_boliviensis
ENSPCAG00000015518	-	76	42.091	ENSSBOG00000026566	-	97	45.000	Saimiri_boliviensis_boliviensis
ENSPCAG00000015518	-	76	44.444	ENSSBOG00000021384	-	95	44.444	Saimiri_boliviensis_boliviensis
ENSPCAG00000015518	-	61	51.744	ENSTTRG00000009395	-	87	51.744	Tursiops_truncatus
ENSPCAG00000015518	-	66	47.668	ENSUMAG00000014447	-	95	47.668	Ursus_maritimus
ENSPCAG00000015518	-	62	47.644	ENSUMAG00000002249	-	87	47.644	Ursus_maritimus