EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000015577 (Gene tree)
Gene ID: -
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 825 bases
Position: chrscaffold_104357:5-829
Accession: 13629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000014501	RRM_5	PF13893.6	5.9e-09	1	1
ENSPCAP00000014501	RRM_1	PF00076.22	1.9e-58	1	3
ENSPCAP00000014501	RRM_1	PF00076.22	1.9e-58	2	3
ENSPCAP00000014501	RRM_1	PF00076.22	1.9e-58	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000015509	PABPC5-201	825	-	ENSPCAP00000014501	275 (aa)	-	UPI00018AD38A

Gene Model

Click here to download ENSPCAG00000015577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000015577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000015577	PABPC5	53	34.722	ENSPCAG00000008368	-	52	34.722
ENSPCAG00000015577	PABPC5	94	38.889	ENSPCAG00000008215	ELAVL4	59	38.889
ENSPCAG00000015577	PABPC5	85	59.649	ENSPCAG00000011787	-	61	60.000
ENSPCAG00000015577	PABPC5	93	60.204	ENSPCAG00000005308	-	98	59.896
ENSPCAG00000015577	PABPC5	93	37.500	ENSPCAG00000014998	ELAVL2	58	37.500
ENSPCAG00000015577	PABPC5	95	66.667	ENSPCAG00000003341	PABPC4	54	66.929

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000015577	PABPC5	100	97.091	ENSG00000174740	PABPC5	99	97.091	Homo_sapiens
ENSPCAG00000015577	PABPC5	100	96.727	ENSAMEG00000020114	PABPC5	99	96.727	Ailuropoda_melanoleuca
ENSPCAG00000015577	PABPC5	100	97.091	ENSANAG00000005063	PABPC5	99	97.091	Aotus_nancymaae
ENSPCAG00000015577	PABPC5	100	96.727	ENSBTAG00000019942	PABPC5	99	96.727	Bos_taurus
ENSPCAG00000015577	PABPC5	100	97.091	ENSCJAG00000003665	PABPC5	99	97.091	Callithrix_jacchus
ENSPCAG00000015577	PABPC5	100	97.091	ENSCAFG00000017452	PABPC5	99	97.091	Canis_familiaris
ENSPCAG00000015577	PABPC5	100	96.727	ENSCHIG00000019004	PABPC5	99	96.727	Capra_hircus
ENSPCAG00000015577	PABPC5	100	97.455	ENSTSYG00000036351	PABPC5	99	97.455	Carlito_syrichta
ENSPCAG00000015577	PABPC5	99	40.493	ENSCAPG00000010714	PABPC5	98	41.549	Cavia_aperea
ENSPCAG00000015577	PABPC5	100	94.182	ENSCPOG00000002555	PABPC5	99	94.182	Cavia_porcellus
ENSPCAG00000015577	PABPC5	100	97.091	ENSCCAG00000032154	PABPC5	99	97.091	Cebus_capucinus
ENSPCAG00000015577	PABPC5	100	97.091	ENSCATG00000043083	PABPC5	99	97.091	Cercocebus_atys
ENSPCAG00000015577	PABPC5	100	95.636	ENSCLAG00000000647	PABPC5	99	95.636	Chinchilla_lanigera
ENSPCAG00000015577	PABPC5	100	97.091	ENSCSAG00000000065	PABPC5	99	97.091	Chlorocebus_sabaeus
ENSPCAG00000015577	PABPC5	100	97.091	ENSCANG00000011473	PABPC5	99	97.091	Colobus_angolensis_palliatus
ENSPCAG00000015577	PABPC5	100	94.182	ENSCGRG00000018699	Pabpc5	99	94.182	Cricetulus_griseus_crigri
ENSPCAG00000015577	PABPC5	100	73.913	ENSETEG00000011832	PABPC5	98	73.913	Echinops_telfairi
ENSPCAG00000015577	PABPC5	100	97.455	ENSEASG00005014396	PABPC5	99	97.455	Equus_asinus_asinus
ENSPCAG00000015577	PABPC5	100	97.455	ENSECAG00000003452	PABPC5	99	97.455	Equus_caballus
ENSPCAG00000015577	PABPC5	100	96.727	ENSFCAG00000004998	PABPC5	99	96.727	Felis_catus
ENSPCAG00000015577	PABPC5	100	96.364	ENSFDAG00000000126	PABPC5	99	96.364	Fukomys_damarensis
ENSPCAG00000015577	PABPC5	100	97.091	ENSGGOG00000007622	PABPC5	99	97.091	Gorilla_gorilla
ENSPCAG00000015577	PABPC5	93	96.396	ENSJJAG00000011960	Pabpc5	98	96.396	Jaculus_jaculus
ENSPCAG00000015577	PABPC5	100	97.091	ENSMFAG00000024561	PABPC5	99	97.091	Macaca_fascicularis
ENSPCAG00000015577	PABPC5	100	97.091	ENSMMUG00000011562	PABPC5	99	97.091	Macaca_mulatta
ENSPCAG00000015577	PABPC5	100	97.091	ENSMNEG00000037604	PABPC5	99	97.091	Macaca_nemestrina
ENSPCAG00000015577	PABPC5	100	97.091	ENSMLEG00000028318	PABPC5	99	97.091	Mandrillus_leucophaeus
ENSPCAG00000015577	PABPC5	100	97.091	ENSMICG00000041706	PABPC5	99	97.091	Microcebus_murinus
ENSPCAG00000015577	PABPC5	100	95.636	ENSMOCG00000001554	Pabpc5	99	95.636	Microtus_ochrogaster
ENSPCAG00000015577	PABPC5	99	95.238	MGP_CAROLIEiJ_G0033367	Pabpc5	98	95.238	Mus_caroli
ENSPCAG00000015577	PABPC5	99	95.238	ENSMUSG00000034732	Pabpc5	98	95.238	Mus_musculus
ENSPCAG00000015577	PABPC5	100	95.636	MGP_PahariEiJ_G0031908	Pabpc5	99	95.636	Mus_pahari
ENSPCAG00000015577	PABPC5	99	95.238	MGP_SPRETEiJ_G0034533	Pabpc5	98	95.238	Mus_spretus
ENSPCAG00000015577	PABPC5	100	95.636	ENSMPUG00000018465	PABPC5	99	95.636	Mustela_putorius_furo
ENSPCAG00000015577	PABPC5	100	97.091	ENSMLUG00000008244	PABPC5	99	97.091	Myotis_lucifugus
ENSPCAG00000015577	PABPC5	93	94.595	ENSNGAG00000004371	Pabpc5	98	94.595	Nannospalax_galili
ENSPCAG00000015577	PABPC5	100	97.091	ENSNLEG00000035086	PABPC5	99	97.091	Nomascus_leucogenys
ENSPCAG00000015577	PABPC5	99	97.285	ENSOPRG00000000856	PABPC5	100	97.285	Ochotona_princeps
ENSPCAG00000015577	PABPC5	100	97.455	ENSOCUG00000010919	PABPC5	99	97.455	Oryctolagus_cuniculus
ENSPCAG00000015577	PABPC5	100	96.727	ENSOGAG00000006882	PABPC5	99	96.727	Otolemur_garnettii
ENSPCAG00000015577	PABPC5	100	97.091	ENSOARG00000010260	PABPC5	99	97.091	Ovis_aries
ENSPCAG00000015577	PABPC5	100	97.091	ENSPPAG00000007378	PABPC5	99	97.091	Pan_paniscus
ENSPCAG00000015577	PABPC5	100	96.727	ENSPPRG00000010742	PABPC5	99	96.727	Panthera_pardus
ENSPCAG00000015577	PABPC5	100	96.727	ENSPTIG00000001480	PABPC5	99	96.727	Panthera_tigris_altaica
ENSPCAG00000015577	PABPC5	100	97.091	ENSPTRG00000022078	PABPC5	99	97.091	Pan_troglodytes
ENSPCAG00000015577	PABPC5	100	97.091	ENSPANG00000018282	PABPC5	99	97.091	Papio_anubis
ENSPCAG00000015577	PABPC5	100	96.000	ENSPEMG00000000171	Pabpc5	98	96.000	Peromyscus_maniculatus_bairdii
ENSPCAG00000015577	PABPC5	100	97.091	ENSPPYG00000020526	PABPC5	99	97.091	Pongo_abelii
ENSPCAG00000015577	PABPC5	100	97.091	ENSPCOG00000000676	PABPC5	99	97.091	Propithecus_coquereli
ENSPCAG00000015577	PABPC5	100	97.818	ENSPVAG00000006465	PABPC5	99	97.818	Pteropus_vampyrus
ENSPCAG00000015577	PABPC5	100	96.000	ENSRNOG00000003354	Pabpc5	99	96.000	Rattus_norvegicus
ENSPCAG00000015577	PABPC5	100	97.091	ENSRBIG00000011760	PABPC5	99	97.091	Rhinopithecus_bieti
ENSPCAG00000015577	PABPC5	100	97.091	ENSRROG00000036708	PABPC5	99	97.091	Rhinopithecus_roxellana
ENSPCAG00000015577	PABPC5	100	97.091	ENSSBOG00000008658	PABPC5	99	97.091	Saimiri_boliviensis_boliviensis
ENSPCAG00000015577	PABPC5	100	95.636	ENSSARG00000014012	PABPC5	99	95.636	Sorex_araneus
ENSPCAG00000015577	PABPC5	100	97.455	ENSSSCG00000040194	PABPC5	99	97.455	Sus_scrofa
ENSPCAG00000015577	PABPC5	100	97.455	ENSTBEG00000016482	PABPC5	99	97.455	Tupaia_belangeri
ENSPCAG00000015577	PABPC5	100	96.727	ENSUAMG00000013627	PABPC5	99	96.727	Ursus_americanus
ENSPCAG00000015577	PABPC5	100	96.727	ENSUMAG00000023934	PABPC5	99	96.727	Ursus_maritimus
ENSPCAG00000015577	PABPC5	100	97.091	ENSVPAG00000001063	PABPC5	99	97.091	Vicugna_pacos
ENSPCAG00000015577	PABPC5	100	97.091	ENSVVUG00000013172	PABPC5	99	97.091	Vulpes_vulpes