EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000015655 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 2463 bases
Position: chrGeneScaffold_6411:35347-37809
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000014600	APOBEC_N	PF08210.11	9.3e-35	1	1
ENSPCAP00000014600	APOBEC_C	PF05240.14	1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000015612	-	522	-	ENSPCAP00000014600	174 (aa)	-	UPI00018AEE20

Gene Model

Click here to download ENSPCAG00000015655's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000015655's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000015655	-	79	33.571	ENSPCAG00000008733	APOBEC1	75	33.571
ENSPCAG00000015655	-	98	30.939	ENSPCAG00000011433	APOBEC2	93	30.939
ENSPCAG00000015655	-	99	36.022	ENSPCAG00000015518	-	76	36.022
ENSPCAG00000015655	-	72	42.400	ENSPCAG00000001848	-	91	42.400

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000015655	-	99	41.111	ENSG00000100298	APOBEC3H	98	42.135	Homo_sapiens
ENSPCAG00000015655	-	98	43.889	ENSAMEG00000010818	-	69	43.889	Ailuropoda_melanoleuca
ENSPCAG00000015655	-	98	41.758	ENSANAG00000025410	APOBEC3H	81	41.758	Aotus_nancymaae
ENSPCAG00000015655	-	99	48.295	ENSBTAG00000007755	APOBEC3H	92	48.295	Bos_taurus
ENSPCAG00000015655	-	98	43.182	ENSCJAG00000012524	APOBEC3H	89	43.182	Callithrix_jacchus
ENSPCAG00000015655	-	96	51.176	ENSCAFG00000001361	APOBEC3Z3	89	51.176	Canis_familiaris
ENSPCAG00000015655	-	97	49.708	ENSCAFG00020002584	-	89	49.708	Canis_lupus_dingo
ENSPCAG00000015655	-	99	49.432	ENSCHIG00000026580	-	89	49.432	Capra_hircus
ENSPCAG00000015655	-	98	44.186	ENSTSYG00000032894	-	100	44.186	Carlito_syrichta
ENSPCAG00000015655	-	99	44.571	ENSCPOG00000009257	-	85	44.571	Cavia_porcellus
ENSPCAG00000015655	-	99	41.304	ENSCCAG00000008525	APOBEC3H	90	41.758	Cebus_capucinus
ENSPCAG00000015655	-	98	44.693	ENSCATG00000030302	APOBEC3H	98	44.693	Cercocebus_atys
ENSPCAG00000015655	-	97	48.555	ENSCLAG00000016615	-	86	48.555	Chinchilla_lanigera
ENSPCAG00000015655	-	99	42.778	ENSCSAG00000006371	APOBEC3H	85	42.778	Chlorocebus_sabaeus
ENSPCAG00000015655	-	99	40.625	ENSCGRG00001022976	Apobec3	73	40.625	Cricetulus_griseus_chok1gshd
ENSPCAG00000015655	-	99	40.625	ENSCGRG00000005621	Apobec3	79	40.625	Cricetulus_griseus_crigri
ENSPCAG00000015655	-	99	43.333	ENSDORG00000027271	-	100	39.796	Dipodomys_ordii
ENSPCAG00000015655	-	99	45.198	ENSECAG00000007726	APOBEC3H	76	45.198	Equus_caballus
ENSPCAG00000015655	-	86	50.000	ENSFCAG00000005251	APOBEC3Z3	79	50.000	Felis_catus
ENSPCAG00000015655	-	98	44.318	ENSSTOG00000007125	-	85	44.318	Ictidomys_tridecemlineatus
ENSPCAG00000015655	-	99	42.647	ENSJJAG00000016840	-	78	42.647	Jaculus_jaculus
ENSPCAG00000015655	-	99	55.429	ENSLAFG00000027404	-	93	55.429	Loxodonta_africana
ENSPCAG00000015655	-	99	44.199	ENSMFAG00000031827	APOBEC3H	89	44.134	Macaca_fascicularis
ENSPCAG00000015655	-	98	43.017	ENSMMUG00000001016	APOBEC3H	87	44.444	Macaca_mulatta
ENSPCAG00000015655	-	99	43.646	ENSMNEG00000039259	APOBEC3H	89	43.575	Macaca_nemestrina
ENSPCAG00000015655	-	99	44.751	ENSMLEG00000033417	APOBEC3H	89	44.693	Mandrillus_leucophaeus
ENSPCAG00000015655	-	99	40.625	ENSMAUG00000011683	Apobec3	75	40.625	Mesocricetus_auratus
ENSPCAG00000015655	-	100	42.308	ENSMOCG00000021576	Apobec3	74	42.308	Microtus_ochrogaster
ENSPCAG00000015655	-	99	39.007	MGP_CAROLIEiJ_G0020029	Apobec3	98	39.759	Mus_caroli
ENSPCAG00000015655	-	99	40.580	ENSMUSG00000009585	Apobec3	98	39.759	Mus_musculus
ENSPCAG00000015655	-	87	40.789	MGP_PahariEiJ_G0020031	-	77	40.789	Mus_pahari
ENSPCAG00000015655	-	99	39.735	MGP_SPRETEiJ_G0020927	Apobec3	98	40.964	Mus_spretus
ENSPCAG00000015655	-	95	45.833	ENSMPUG00000013239	-	81	45.833	Mustela_putorius_furo
ENSPCAG00000015655	-	98	43.353	ENSNGAG00000018998	Apobec3	91	43.353	Nannospalax_galili
ENSPCAG00000015655	-	99	42.222	ENSNLEG00000015218	-	85	42.222	Nomascus_leucogenys
ENSPCAG00000015655	-	100	35.028	ENSOCUG00000023913	-	87	35.028	Oryctolagus_cuniculus
ENSPCAG00000015655	-	99	49.432	ENSOARG00000016290	APOBEC3F	90	49.432	Ovis_aries
ENSPCAG00000015655	-	99	41.111	ENSPPAG00000036522	APOBEC3H	98	41.667	Pan_paniscus
ENSPCAG00000015655	-	76	34.091	ENSPPRG00000003675	-	69	34.091	Panthera_pardus
ENSPCAG00000015655	-	96	47.674	ENSPPRG00000003941	-	89	47.674	Panthera_pardus
ENSPCAG00000015655	-	96	47.674	ENSPTIG00000010283	-	89	47.674	Panthera_tigris_altaica
ENSPCAG00000015655	-	99	41.111	ENSPTRG00000014390	APOBEC3H	98	41.667	Pan_troglodytes
ENSPCAG00000015655	-	98	42.697	ENSPANG00000010774	APOBEC3H	93	40.449	Papio_anubis
ENSPCAG00000015655	-	99	39.326	ENSPEMG00000000456	Apobec3	81	39.326	Peromyscus_maniculatus_bairdii
ENSPCAG00000015655	-	99	42.222	ENSPPYG00000011834	-	85	42.222	Pongo_abelii
ENSPCAG00000015655	-	72	36.800	ENSPVAG00000024161	-	95	36.800	Pteropus_vampyrus
ENSPCAG00000015655	-	72	36.800	ENSPVAG00000024267	-	95	36.800	Pteropus_vampyrus
ENSPCAG00000015655	-	99	44.633	ENSPVAG00000009462	-	100	44.633	Pteropus_vampyrus
ENSPCAG00000015655	-	99	37.989	ENSRNOG00000016852	Apobec3	84	37.989	Rattus_norvegicus
ENSPCAG00000015655	-	99	43.889	ENSRBIG00000029088	APOBEC3H	89	43.820	Rhinopithecus_bieti
ENSPCAG00000015655	-	99	44.444	ENSRROG00000024699	APOBEC3H	89	44.382	Rhinopithecus_roxellana
ENSPCAG00000015655	-	98	40.884	ENSSBOG00000030005	APOBEC3H	99	40.884	Saimiri_boliviensis_boliviensis
ENSPCAG00000015655	-	99	49.153	ENSSSCG00000000091	APOBEC3B	79	49.153	Sus_scrofa
ENSPCAG00000015655	-	95	43.713	ENSTBEG00000001532	-	99	43.713	Tupaia_belangeri
ENSPCAG00000015655	-	99	49.432	ENSTTRG00000001266	-	99	49.432	Tursiops_truncatus
ENSPCAG00000015655	-	98	43.956	ENSUAMG00000004427	-	82	43.956	Ursus_americanus
ENSPCAG00000015655	-	98	45.143	ENSUMAG00000014435	-	90	45.143	Ursus_maritimus
ENSPCAG00000015655	-	71	56.452	ENSVPAG00000011108	-	97	56.452	Vicugna_pacos
ENSPCAG00000015655	-	96	55.000	ENSVVUG00000014624	-	56	55.000	Vulpes_vulpes