EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000016360 (Gene tree)
Gene ID: -
Gene Symbol: LSM11
Alias: FLJ38273
Full Name: LSM11%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 9893 bases
Position: chrscaffold_6706:29101-38993
Accession: 30860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000015278	LSM	PF01423.22	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000016323	LSM11-201	642	-	ENSPCAP00000015278	213 (aa)	-	UPI00018AE8B5

Gene Model

Click here to download ENSPCAG00000016360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000016360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000016360	LSM11	99	95.238	ENSCAPG00000009739	LSM11	100	95.238	Cavia_aperea
ENSPCAG00000016360	LSM11	100	94.836	ENSCPOG00000000906	LSM11	100	94.836	Cavia_porcellus
ENSPCAG00000016360	LSM11	100	92.958	ENSCLAG00000017067	LSM11	91	92.958	Chinchilla_lanigera
ENSPCAG00000016360	LSM11	99	92.381	ENSCHOG00000010946	LSM11	100	92.381	Choloepus_hoffmanni
ENSPCAG00000016360	LSM11	99	93.333	ENSCANG00000040781	LSM11	100	93.333	Colobus_angolensis_palliatus
ENSPCAG00000016360	LSM11	100	92.488	ENSCGRG00000000197	Lsm11	96	92.488	Cricetulus_griseus_crigri
ENSPCAG00000016360	LSM11	99	39.524	ENSCSEG00000019951	lsm11	51	39.048	Cynoglossus_semilaevis
ENSPCAG00000016360	LSM11	99	94.286	ENSEEUG00000010814	LSM11	100	94.286	Erinaceus_europaeus
ENSPCAG00000016360	LSM11	99	93.333	ENSMLEG00000027420	LSM11	100	93.333	Mandrillus_leucophaeus
ENSPCAG00000016360	LSM11	99	40.284	ENSMMOG00000009365	lsm11	51	40.758	Mola_mola
ENSPCAG00000016360	LSM11	100	70.423	ENSMLUG00000015930	LSM11	97	70.423	Myotis_lucifugus
ENSPCAG00000016360	LSM11	99	94.313	ENSOGAG00000009059	LSM11	100	94.313	Otolemur_garnettii
ENSPCAG00000016360	LSM11	99	62.385	ENSPSIG00000005234	LSM11	100	59.633	Pelodiscus_sinensis
ENSPCAG00000016360	LSM11	98	41.627	ENSPMGG00000020709	lsm11	50	41.627	Periophthalmus_magnuspinnatus
ENSPCAG00000016360	LSM11	99	94.762	ENSTBEG00000000992	LSM11	100	94.762	Tupaia_belangeri