EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000016662 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 28184 bases
Position: chrGeneScaffold_3078:37384-65567
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000015613	POP1	PF06978.11	1.1e-35	1	2
ENSPCAP00000015613	POP1	PF06978.11	1.1e-35	2	2
ENSPCAP00000015613	POPLD	PF08170.12	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000016678	POP1-201	3060	-	ENSPCAP00000015613	1019 (aa)	-	UPI00018AECF6

Gene Model

Click here to download ENSPCAG00000016662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000016662's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000016662	POP1	100	75.902	ENSG00000104356	POP1	100	83.060	Homo_sapiens
ENSPCAG00000016662	POP1	100	45.636	ENSAPOG00000008198	pop1	100	45.636	Acanthochromis_polyacanthus
ENSPCAG00000016662	POP1	100	74.394	ENSAMEG00000000556	POP1	100	75.170	Ailuropoda_melanoleuca
ENSPCAG00000016662	POP1	100	44.444	ENSACIG00000004169	POP1	100	44.497	Amphilophus_citrinellus
ENSPCAG00000016662	POP1	100	44.717	ENSAOCG00000010991	pop1	100	45.014	Amphiprion_ocellaris
ENSPCAG00000016662	POP1	91	44.525	ENSAPEG00000007607	pop1	96	45.530	Amphiprion_percula
ENSPCAG00000016662	POP1	100	43.974	ENSATEG00000024814	POP1	100	44.026	Anabas_testudineus
ENSPCAG00000016662	POP1	92	59.158	ENSAPLG00000014418	POP1	100	60.127	Anas_platyrhynchos
ENSPCAG00000016662	POP1	100	53.204	ENSACAG00000016083	POP1	100	53.204	Anolis_carolinensis
ENSPCAG00000016662	POP1	88	83.976	ENSANAG00000026360	POP1	99	83.976	Aotus_nancymaae
ENSPCAG00000016662	POP1	100	44.645	ENSACLG00000010951	pop1	100	45.057	Astatotilapia_calliptera
ENSPCAG00000016662	POP1	100	43.848	ENSAMXG00000014483	POP1	100	43.848	Astyanax_mexicanus
ENSPCAG00000016662	POP1	100	72.000	ENSBTAG00000012596	POP1	100	72.683	Bos_taurus
ENSPCAG00000016662	POP1	100	74.634	ENSCJAG00000015567	POP1	100	75.512	Callithrix_jacchus
ENSPCAG00000016662	POP1	100	74.975	ENSCAFG00000000469	POP1	100	74.975	Canis_familiaris
ENSPCAG00000016662	POP1	100	74.829	ENSCAFG00020026765	POP1	100	74.829	Canis_lupus_dingo
ENSPCAG00000016662	POP1	100	72.612	ENSCHIG00000017066	POP1	100	73.294	Capra_hircus
ENSPCAG00000016662	POP1	100	74.927	ENSTSYG00000003097	POP1	100	74.927	Carlito_syrichta
ENSPCAG00000016662	POP1	100	69.951	ENSCAPG00000007251	POP1	100	69.951	Cavia_aperea
ENSPCAG00000016662	POP1	100	71.933	ENSCPOG00000002901	POP1	100	71.933	Cavia_porcellus
ENSPCAG00000016662	POP1	100	75.805	ENSCCAG00000018939	POP1	94	83.570	Cebus_capucinus
ENSPCAG00000016662	POP1	100	75.902	ENSCATG00000040916	POP1	100	76.195	Cercocebus_atys
ENSPCAG00000016662	POP1	100	73.405	ENSCLAG00000007208	POP1	97	73.405	Chinchilla_lanigera
ENSPCAG00000016662	POP1	90	76.056	ENSCSAG00000012340	POP1	99	76.490	Chlorocebus_sabaeus
ENSPCAG00000016662	POP1	95	73.668	ENSCHOG00000011432	POP1	99	73.668	Choloepus_hoffmanni
ENSPCAG00000016662	POP1	100	61.501	ENSCPBG00000006373	POP1	100	61.501	Chrysemys_picta_bellii
ENSPCAG00000016662	POP1	82	38.132	ENSCING00000008323	-	90	35.789	Ciona_intestinalis
ENSPCAG00000016662	POP1	100	75.415	ENSCANG00000001647	POP1	100	75.805	Colobus_angolensis_palliatus
ENSPCAG00000016662	POP1	100	70.117	ENSCGRG00001017308	Pop1	100	70.117	Cricetulus_griseus_chok1gshd
ENSPCAG00000016662	POP1	100	64.746	ENSCGRG00000010824	Pop1	100	64.746	Cricetulus_griseus_crigri
ENSPCAG00000016662	POP1	100	43.251	ENSCSEG00000008737	POP1	100	43.726	Cynoglossus_semilaevis
ENSPCAG00000016662	POP1	100	45.933	ENSCVAG00000022248	pop1	100	45.933	Cyprinodon_variegatus
ENSPCAG00000016662	POP1	100	71.469	ENSDNOG00000019974	POP1	100	71.469	Dasypus_novemcinctus
ENSPCAG00000016662	POP1	100	64.976	ENSDORG00000015384	Pop1	100	66.244	Dipodomys_ordii
ENSPCAG00000016662	POP1	61	31.868	FBgn0026702	l(1)G0045	98	31.060	Drosophila_melanogaster
ENSPCAG00000016662	POP1	89	71.754	ENSETEG00000007839	POP1	88	71.754	Echinops_telfairi
ENSPCAG00000016662	POP1	100	76.098	ENSEASG00005003189	POP1	98	76.098	Equus_asinus_asinus
ENSPCAG00000016662	POP1	100	75.707	ENSECAG00000024236	POP1	100	75.707	Equus_caballus
ENSPCAG00000016662	POP1	67	91.667	ENSEEUG00000003050	-	70	91.667	Erinaceus_europaeus
ENSPCAG00000016662	POP1	100	45.949	ENSELUG00000003526	pop1	100	46.169	Esox_lucius
ENSPCAG00000016662	POP1	100	75.512	ENSFCAG00000002168	POP1	100	76.293	Felis_catus
ENSPCAG00000016662	POP1	100	56.989	ENSFALG00000005711	POP1	100	56.989	Ficedula_albicollis
ENSPCAG00000016662	POP1	100	73.386	ENSFDAG00000017068	POP1	100	73.386	Fukomys_damarensis
ENSPCAG00000016662	POP1	100	45.845	ENSFHEG00000019518	pop1	100	45.507	Fundulus_heteroclitus
ENSPCAG00000016662	POP1	92	44.284	ENSGMOG00000000659	POP1	97	44.479	Gadus_morhua
ENSPCAG00000016662	POP1	100	44.123	ENSGAFG00000019770	POP1	100	44.050	Gambusia_affinis
ENSPCAG00000016662	POP1	100	43.750	ENSGACG00000003499	pop1	100	43.750	Gasterosteus_aculeatus
ENSPCAG00000016662	POP1	100	60.193	ENSGAGG00000011737	POP1	98	60.485	Gopherus_agassizii
ENSPCAG00000016662	POP1	100	75.805	ENSGGOG00000003176	POP1	100	76.683	Gorilla_gorilla
ENSPCAG00000016662	POP1	100	44.929	ENSHBUG00000021583	pop1	100	45.024	Haplochromis_burtoni
ENSPCAG00000016662	POP1	100	72.763	ENSHGLG00000006029	POP1	100	72.763	Heterocephalus_glaber_female
ENSPCAG00000016662	POP1	100	72.763	ENSHGLG00100016879	POP1	100	72.763	Heterocephalus_glaber_male
ENSPCAG00000016662	POP1	90	47.146	ENSHCOG00000013888	pop1	96	47.146	Hippocampus_comes
ENSPCAG00000016662	POP1	100	43.290	ENSIPUG00000018336	pop1	100	43.290	Ictalurus_punctatus
ENSPCAG00000016662	POP1	100	74.560	ENSSTOG00000011455	POP1	97	74.560	Ictidomys_tridecemlineatus
ENSPCAG00000016662	POP1	100	70.392	ENSJJAG00000013325	Pop1	100	70.392	Jaculus_jaculus
ENSPCAG00000016662	POP1	100	45.254	ENSKMAG00000001346	POP1	100	45.350	Kryptolebias_marmoratus
ENSPCAG00000016662	POP1	89	46.196	ENSLBEG00000024457	POP1	95	46.055	Labrus_bergylta
ENSPCAG00000016662	POP1	93	52.983	ENSLACG00000012498	POP1	99	52.983	Latimeria_chalumnae
ENSPCAG00000016662	POP1	100	49.568	ENSLOCG00000009817	POP1	100	50.434	Lepisosteus_oculatus
ENSPCAG00000016662	POP1	100	83.284	ENSLAFG00000010770	POP1	100	83.284	Loxodonta_africana
ENSPCAG00000016662	POP1	100	76.098	ENSMFAG00000000347	POP1	100	76.488	Macaca_fascicularis
ENSPCAG00000016662	POP1	100	75.707	ENSMNEG00000036870	POP1	100	76.098	Macaca_nemestrina
ENSPCAG00000016662	POP1	100	76.000	ENSMLEG00000034986	POP1	100	76.293	Mandrillus_leucophaeus
ENSPCAG00000016662	POP1	100	44.340	ENSMAMG00000004040	pop1	100	44.697	Mastacembelus_armatus
ENSPCAG00000016662	POP1	100	44.929	ENSMZEG00005025448	pop1	100	45.024	Maylandia_zebra
ENSPCAG00000016662	POP1	100	55.439	ENSMGAG00000012167	POP1	100	55.376	Meleagris_gallopavo
ENSPCAG00000016662	POP1	100	70.020	ENSMAUG00000017537	Pop1	100	70.020	Mesocricetus_auratus
ENSPCAG00000016662	POP1	100	75.586	ENSMICG00000004361	POP1	100	75.977	Microcebus_murinus
ENSPCAG00000016662	POP1	100	69.442	ENSMOCG00000006356	Pop1	100	69.833	Microtus_ochrogaster
ENSPCAG00000016662	POP1	100	41.788	ENSMMOG00000018242	pop1	100	41.788	Mola_mola
ENSPCAG00000016662	POP1	100	62.730	ENSMODG00000006561	POP1	100	63.504	Monodelphis_domestica
ENSPCAG00000016662	POP1	100	45.238	ENSMALG00000012621	POP1	100	45.429	Monopterus_albus
ENSPCAG00000016662	POP1	100	68.976	MGP_CAROLIEiJ_G0019726	Pop1	100	68.976	Mus_caroli
ENSPCAG00000016662	POP1	100	68.683	ENSMUSG00000022325	Pop1	100	68.683	Mus_musculus
ENSPCAG00000016662	POP1	100	68.915	MGP_PahariEiJ_G0019735	Pop1	100	68.915	Mus_pahari
ENSPCAG00000016662	POP1	100	68.488	MGP_SPRETEiJ_G0020622	Pop1	100	68.488	Mus_spretus
ENSPCAG00000016662	POP1	100	75.778	ENSMPUG00000015250	POP1	100	75.778	Mustela_putorius_furo
ENSPCAG00000016662	POP1	100	72.249	ENSMLUG00000010204	POP1	100	72.347	Myotis_lucifugus
ENSPCAG00000016662	POP1	100	73.926	ENSNGAG00000001582	Pop1	100	73.926	Nannospalax_galili
ENSPCAG00000016662	POP1	89	45.905	ENSNBRG00000002356	pop1	94	46.113	Neolamprologus_brichardi
ENSPCAG00000016662	POP1	100	75.805	ENSNLEG00000002541	POP1	100	76.195	Nomascus_leucogenys
ENSPCAG00000016662	POP1	93	55.439	ENSMEUG00000003118	POP1	98	55.439	Notamacropus_eugenii
ENSPCAG00000016662	POP1	100	71.541	ENSOPRG00000007667	POP1	100	71.541	Ochotona_princeps
ENSPCAG00000016662	POP1	100	71.303	ENSODEG00000003984	POP1	100	71.303	Octodon_degus
ENSPCAG00000016662	POP1	100	45.592	ENSONIG00000016445	pop1	100	45.817	Oreochromis_niloticus
ENSPCAG00000016662	POP1	54	65.854	ENSOANG00000001278	-	85	66.463	Ornithorhynchus_anatinus
ENSPCAG00000016662	POP1	100	72.233	ENSOCUG00000017400	POP1	100	73.010	Oryctolagus_cuniculus
ENSPCAG00000016662	POP1	92	46.973	ENSORLG00000002839	pop1	100	45.149	Oryzias_latipes
ENSPCAG00000016662	POP1	90	46.908	ENSORLG00020022450	POP1	96	46.915	Oryzias_latipes_hni
ENSPCAG00000016662	POP1	92	47.126	ENSORLG00015012746	POP1	100	45.437	Oryzias_latipes_hsok
ENSPCAG00000016662	POP1	100	44.585	ENSOMEG00000006915	pop1	99	44.639	Oryzias_melastigma
ENSPCAG00000016662	POP1	100	74.902	ENSOGAG00000001466	POP1	100	74.902	Otolemur_garnettii
ENSPCAG00000016662	POP1	100	75.805	ENSPPAG00000018410	POP1	100	76.683	Pan_paniscus
ENSPCAG00000016662	POP1	100	75.926	ENSPPRG00000005002	POP1	100	75.926	Panthera_pardus
ENSPCAG00000016662	POP1	100	75.341	ENSPTIG00000016527	POP1	100	76.121	Panthera_tigris_altaica
ENSPCAG00000016662	POP1	100	75.707	ENSPTRG00000020458	POP1	100	76.585	Pan_troglodytes
ENSPCAG00000016662	POP1	100	76.000	ENSPANG00000009704	POP1	100	76.390	Papio_anubis
ENSPCAG00000016662	POP1	100	47.931	ENSPKIG00000016325	POP1	100	47.931	Paramormyrops_kingsleyae
ENSPCAG00000016662	POP1	100	59.457	ENSPSIG00000012343	POP1	100	59.747	Pelodiscus_sinensis
ENSPCAG00000016662	POP1	90	46.262	ENSPMGG00000022253	POP1	95	46.203	Periophthalmus_magnuspinnatus
ENSPCAG00000016662	POP1	99	68.995	ENSPEMG00000023633	Pop1	100	68.995	Peromyscus_maniculatus_bairdii
ENSPCAG00000016662	POP1	90	42.529	ENSPMAG00000003209	POP1	100	42.649	Petromyzon_marinus
ENSPCAG00000016662	POP1	100	62.201	ENSPCIG00000012216	POP1	100	62.692	Phascolarctos_cinereus
ENSPCAG00000016662	POP1	100	45.933	ENSPFOG00000012490	POP1	100	46.029	Poecilia_formosa
ENSPCAG00000016662	POP1	100	45.533	ENSPLAG00000004646	POP1	100	45.629	Poecilia_latipinna
ENSPCAG00000016662	POP1	100	45.785	ENSPMEG00000019592	POP1	100	45.873	Poecilia_mexicana
ENSPCAG00000016662	POP1	100	45.489	ENSPREG00000020951	POP1	100	45.585	Poecilia_reticulata
ENSPCAG00000016662	POP1	100	75.024	ENSPPYG00000018777	POP1	100	75.902	Pongo_abelii
ENSPCAG00000016662	POP1	100	75.684	ENSPCOG00000019420	POP1	100	76.074	Propithecus_coquereli
ENSPCAG00000016662	POP1	100	74.366	ENSPVAG00000014468	POP1	100	75.146	Pteropus_vampyrus
ENSPCAG00000016662	POP1	89	46.328	ENSPNYG00000004476	pop1	97	46.010	Pundamilia_nyererei
ENSPCAG00000016662	POP1	100	41.035	ENSPNAG00000000265	pop1	100	41.035	Pygocentrus_nattereri
ENSPCAG00000016662	POP1	100	69.561	ENSRNOG00000005243	Pop1	100	69.561	Rattus_norvegicus
ENSPCAG00000016662	POP1	100	75.512	ENSRBIG00000007996	POP1	100	75.902	Rhinopithecus_bieti
ENSPCAG00000016662	POP1	100	75.707	ENSRROG00000012334	POP1	100	76.098	Rhinopithecus_roxellana
ENSPCAG00000016662	POP1	99	74.531	ENSSBOG00000020830	POP1	100	75.420	Saimiri_boliviensis_boliviensis
ENSPCAG00000016662	POP1	100	63.230	ENSSHAG00000000296	POP1	100	63.230	Sarcophilus_harrisii
ENSPCAG00000016662	POP1	100	46.821	ENSSFOG00015007429	pop1	99	46.821	Scleropages_formosus
ENSPCAG00000016662	POP1	85	49.387	ENSSMAG00000010467	POP1	98	45.661	Scophthalmus_maximus
ENSPCAG00000016662	POP1	100	43.609	ENSSDUG00000007817	POP1	100	44.068	Seriola_dumerili
ENSPCAG00000016662	POP1	100	44.854	ENSSLDG00000012565	POP1	100	44.948	Seriola_lalandi_dorsalis
ENSPCAG00000016662	POP1	100	56.585	ENSSPUG00000003550	-	100	56.780	Sphenodon_punctatus
ENSPCAG00000016662	POP1	90	47.568	ENSSPAG00000014955	pop1	94	47.676	Stegastes_partitus
ENSPCAG00000016662	POP1	100	73.457	ENSSSCG00000006078	POP1	100	74.143	Sus_scrofa
ENSPCAG00000016662	POP1	92	53.234	ENSTGUG00000012011	-	100	53.234	Taeniopygia_guttata
ENSPCAG00000016662	POP1	91	45.303	ENSTRUG00000010856	pop1	94	45.303	Takifugu_rubripes
ENSPCAG00000016662	POP1	92	46.499	ENSTNIG00000013297	pop1	99	46.514	Tetraodon_nigroviridis
ENSPCAG00000016662	POP1	95	72.057	ENSTBEG00000014214	POP1	99	72.057	Tupaia_belangeri
ENSPCAG00000016662	POP1	100	71.220	ENSTTRG00000016071	POP1	100	72.000	Tursiops_truncatus
ENSPCAG00000016662	POP1	99	72.387	ENSUAMG00000017309	POP1	100	73.176	Ursus_americanus
ENSPCAG00000016662	POP1	91	84.615	ENSUMAG00000016952	POP1	100	84.615	Ursus_maritimus
ENSPCAG00000016662	POP1	77	81.818	ENSVPAG00000008278	POP1	77	81.818	Vicugna_pacos
ENSPCAG00000016662	POP1	100	74.634	ENSVVUG00000010994	POP1	100	74.634	Vulpes_vulpes
ENSPCAG00000016662	POP1	100	39.924	ENSXCOG00000017043	POP1	100	40.730	Xiphophorus_couchianus
ENSPCAG00000016662	POP1	100	44.744	ENSXMAG00000002472	POP1	100	44.744	Xiphophorus_maculatus