EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000016885 (Gene tree)
Gene ID: -
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 18952 bases
Position: chrGeneScaffold_2692:2934-21885
Accession: 11157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000015788	zf-U1	PF06220.12	8.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000016871	SNRPC-201	528	-	ENSPCAP00000015788	175 (aa)	-	UPI00018AD93D

Gene Model

Click here to download ENSPCAG00000016885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000016885's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000016885	SNRPC	100	91.667	ENSG00000124562	SNRPC	100	100.000	Homo_sapiens
ENSPCAG00000016885	SNRPC	95	94.767	ENSAMEG00000000963	SNRPC	95	94.767	Ailuropoda_melanoleuca
ENSPCAG00000016885	SNRPC	95	92.771	ENSACAG00000015721	SNRPC	92	92.771	Anolis_carolinensis
ENSPCAG00000016885	SNRPC	90	86.624	ENSANAG00000021026	-	100	78.616	Aotus_nancymaae
ENSPCAG00000016885	SNRPC	90	98.726	ENSANAG00000007843	-	99	98.726	Aotus_nancymaae
ENSPCAG00000016885	SNRPC	90	75.159	ENSANAG00000021444	-	61	80.208	Aotus_nancymaae
ENSPCAG00000016885	SNRPC	100	92.222	ENSANAG00000019696	-	99	99.363	Aotus_nancymaae
ENSPCAG00000016885	SNRPC	95	87.425	ENSANAG00000020588	-	98	87.425	Aotus_nancymaae
ENSPCAG00000016885	SNRPC	90	94.904	ENSANAG00000019157	-	100	93.711	Aotus_nancymaae
ENSPCAG00000016885	SNRPC	95	84.431	ENSANAG00000019726	-	97	85.030	Aotus_nancymaae
ENSPCAG00000016885	SNRPC	90	84.076	ENSAMXG00000032641	snrpc	87	83.019	Astyanax_mexicanus
ENSPCAG00000016885	SNRPC	90	99.363	ENSBTAG00000024549	SNRPC	99	99.363	Bos_taurus
ENSPCAG00000016885	SNRPC	90	98.089	ENSCJAG00000043055	-	99	98.089	Callithrix_jacchus
ENSPCAG00000016885	SNRPC	90	96.815	ENSCJAG00000041822	-	99	96.815	Callithrix_jacchus
ENSPCAG00000016885	SNRPC	100	91.667	ENSCJAG00000015321	-	99	99.363	Callithrix_jacchus
ENSPCAG00000016885	SNRPC	90	77.707	ENSCAFG00000025525	-	100	76.730	Canis_familiaris
ENSPCAG00000016885	SNRPC	72	92.063	ENSCAFG00000001231	-	99	92.063	Canis_familiaris
ENSPCAG00000016885	SNRPC	90	96.835	ENSCAFG00000028988	-	99	96.835	Canis_familiaris
ENSPCAG00000016885	SNRPC	90	94.904	ENSCAFG00000031775	-	100	93.711	Canis_familiaris
ENSPCAG00000016885	SNRPC	90	77.841	ENSCAFG00020026577	-	100	83.146	Canis_lupus_dingo
ENSPCAG00000016885	SNRPC	90	96.178	ENSCAFG00020005758	-	99	96.178	Canis_lupus_dingo
ENSPCAG00000016885	SNRPC	90	99.363	ENSCAFG00020005945	-	99	99.363	Canis_lupus_dingo
ENSPCAG00000016885	SNRPC	90	94.904	ENSCAFG00020017383	-	100	93.711	Canis_lupus_dingo
ENSPCAG00000016885	SNRPC	94	85.455	ENSCAFG00020009944	-	94	85.455	Canis_lupus_dingo
ENSPCAG00000016885	SNRPC	90	71.975	ENSCHIG00000005039	-	100	69.811	Capra_hircus
ENSPCAG00000016885	SNRPC	90	98.726	ENSCHIG00000012087	-	99	98.726	Capra_hircus
ENSPCAG00000016885	SNRPC	90	99.363	ENSTSYG00000011216	-	99	99.363	Carlito_syrichta
ENSPCAG00000016885	SNRPC	90	82.166	ENSTSYG00000025721	-	100	74.214	Carlito_syrichta
ENSPCAG00000016885	SNRPC	88	89.610	ENSTSYG00000029745	-	64	89.062	Carlito_syrichta
ENSPCAG00000016885	SNRPC	81	100.000	ENSCAPG00000005161	SNRPC	100	100.000	Cavia_aperea
ENSPCAG00000016885	SNRPC	90	99.363	ENSCPOG00000008563	SNRPC	99	99.363	Cavia_porcellus
ENSPCAG00000016885	SNRPC	89	91.667	ENSCCAG00000022751	-	95	91.667	Cebus_capucinus
ENSPCAG00000016885	SNRPC	89	80.645	ENSCCAG00000026624	-	66	73.885	Cebus_capucinus
ENSPCAG00000016885	SNRPC	89	80.128	ENSCCAG00000022209	-	95	80.128	Cebus_capucinus
ENSPCAG00000016885	SNRPC	94	89.222	ENSCCAG00000036059	-	90	91.925	Cebus_capucinus
ENSPCAG00000016885	SNRPC	90	68.790	ENSCCAG00000028293	-	63	86.585	Cebus_capucinus
ENSPCAG00000016885	SNRPC	99	91.573	ENSCATG00000035787	SNRPC	99	99.363	Cercocebus_atys
ENSPCAG00000016885	SNRPC	89	82.051	ENSCLAG00000010242	-	96	82.051	Chinchilla_lanigera
ENSPCAG00000016885	SNRPC	90	99.363	ENSCLAG00000016920	SNRPC	99	99.363	Chinchilla_lanigera
ENSPCAG00000016885	SNRPC	90	78.409	ENSCSAG00000009821	SNRPC	100	83.708	Chlorocebus_sabaeus
ENSPCAG00000016885	SNRPC	91	82.390	ENSCHOG00000011439	SNRPC	100	76.536	Choloepus_hoffmanni
ENSPCAG00000016885	SNRPC	90	96.815	ENSCPBG00000027142	SNRPC	99	96.815	Chrysemys_picta_bellii
ENSPCAG00000016885	SNRPC	87	48.026	ENSCING00000021229	ci-zf(matrin)-4	51	80.645	Ciona_intestinalis
ENSPCAG00000016885	SNRPC	90	99.363	ENSCANG00000028035	SNRPC	99	99.363	Colobus_angolensis_palliatus
ENSPCAG00000016885	SNRPC	90	98.726	ENSCGRG00001009011	-	99	98.726	Cricetulus_griseus_chok1gshd
ENSPCAG00000016885	SNRPC	90	86.624	ENSCGRG00001021483	-	100	84.277	Cricetulus_griseus_chok1gshd
ENSPCAG00000016885	SNRPC	91	98.113	ENSCGRG00000005005	Snrpc	100	98.113	Cricetulus_griseus_crigri
ENSPCAG00000016885	SNRPC	90	84.076	ENSDARG00000009871	snrpc	100	83.019	Danio_rerio
ENSPCAG00000016885	SNRPC	90	98.089	ENSDNOG00000034699	-	98	98.089	Dasypus_novemcinctus
ENSPCAG00000016885	SNRPC	67	98.291	ENSDNOG00000042403	-	93	98.291	Dasypus_novemcinctus
ENSPCAG00000016885	SNRPC	95	78.947	ENSDORG00000005955	Snrpc	72	77.193	Dipodomys_ordii
ENSPCAG00000016885	SNRPC	85	78.523	ENSDORG00000029823	-	56	92.208	Dipodomys_ordii
ENSPCAG00000016885	SNRPC	88	95.455	ENSETEG00000008268	-	100	94.231	Echinops_telfairi
ENSPCAG00000016885	SNRPC	51	92.391	ENSETEG00000008756	-	84	91.860	Echinops_telfairi
ENSPCAG00000016885	SNRPC	88	91.558	ENSETEG00000011265	-	100	90.385	Echinops_telfairi
ENSPCAG00000016885	SNRPC	90	99.363	ENSEASG00005021007	SNRPC	99	99.363	Equus_asinus_asinus
ENSPCAG00000016885	SNRPC	90	99.363	ENSECAG00000026848	SNRPC	99	99.363	Equus_caballus
ENSPCAG00000016885	SNRPC	98	76.163	ENSEEUG00000014633	SNRPC	98	76.163	Erinaceus_europaeus
ENSPCAG00000016885	SNRPC	90	77.848	ENSELUG00000000815	SNRPC	50	91.026	Esox_lucius
ENSPCAG00000016885	SNRPC	100	85.227	ENSFCAG00000031775	-	98	85.227	Felis_catus
ENSPCAG00000016885	SNRPC	90	99.363	ENSFCAG00000044077	-	99	99.363	Felis_catus
ENSPCAG00000016885	SNRPC	90	98.089	ENSFALG00000003756	SNRPC	99	98.089	Ficedula_albicollis
ENSPCAG00000016885	SNRPC	90	99.363	ENSFDAG00000018111	SNRPC	99	99.363	Fukomys_damarensis
ENSPCAG00000016885	SNRPC	90	96.203	ENSGALG00000002773	SNRPC	99	96.203	Gallus_gallus
ENSPCAG00000016885	SNRPC	90	96.815	ENSGAGG00000003063	SNRPC	99	96.815	Gopherus_agassizii
ENSPCAG00000016885	SNRPC	90	99.363	ENSGGOG00000012499	SNRPC	99	99.363	Gorilla_gorilla
ENSPCAG00000016885	SNRPC	90	80.255	ENSHGLG00000017741	-	100	76.730	Heterocephalus_glaber_female
ENSPCAG00000016885	SNRPC	90	99.363	ENSHGLG00000013981	SNRPC	99	100.000	Heterocephalus_glaber_female
ENSPCAG00000016885	SNRPC	73	74.803	ENSHGLG00000005871	-	100	74.214	Heterocephalus_glaber_female
ENSPCAG00000016885	SNRPC	90	99.363	ENSHGLG00100009478	SNRPC	99	100.000	Heterocephalus_glaber_male
ENSPCAG00000016885	SNRPC	90	80.255	ENSHGLG00100010786	-	100	76.730	Heterocephalus_glaber_male
ENSPCAG00000016885	SNRPC	90	94.268	ENSHGLG00100017764	-	100	93.082	Heterocephalus_glaber_male
ENSPCAG00000016885	SNRPC	90	84.713	ENSIPUG00000024851	snrpc	100	83.648	Ictalurus_punctatus
ENSPCAG00000016885	SNRPC	90	99.363	ENSSTOG00000013786	SNRPC	99	99.363	Ictidomys_tridecemlineatus
ENSPCAG00000016885	SNRPC	90	98.726	ENSJJAG00000021741	Snrpc	99	98.726	Jaculus_jaculus
ENSPCAG00000016885	SNRPC	97	83.429	ENSLACG00000013753	SNRPC	95	87.135	Latimeria_chalumnae
ENSPCAG00000016885	SNRPC	90	99.363	ENSLAFG00000013534	SNRPC	99	99.363	Loxodonta_africana
ENSPCAG00000016885	SNRPC	90	98.726	ENSMFAG00000030525	-	99	98.726	Macaca_fascicularis
ENSPCAG00000016885	SNRPC	90	99.363	ENSMFAG00000031764	-	99	99.363	Macaca_fascicularis
ENSPCAG00000016885	SNRPC	89	100.000	ENSMMUG00000000869	-	95	100.000	Macaca_mulatta
ENSPCAG00000016885	SNRPC	90	98.089	ENSMMUG00000039415	-	99	98.089	Macaca_mulatta
ENSPCAG00000016885	SNRPC	90	89.172	ENSMMUG00000045425	-	100	88.050	Macaca_mulatta
ENSPCAG00000016885	SNRPC	100	91.111	ENSMNEG00000032731	SNRPC	99	99.363	Macaca_nemestrina
ENSPCAG00000016885	SNRPC	89	90.968	ENSMLEG00000040224	-	89	90.968	Mandrillus_leucophaeus
ENSPCAG00000016885	SNRPC	100	92.737	ENSMLEG00000033916	-	99	99.363	Mandrillus_leucophaeus
ENSPCAG00000016885	SNRPC	100	89.143	ENSMGAG00000006054	SNRPC	99	96.178	Meleagris_gallopavo
ENSPCAG00000016885	SNRPC	90	87.261	ENSMICG00000009130	-	100	86.792	Microcebus_murinus
ENSPCAG00000016885	SNRPC	97	81.871	ENSMICG00000036552	-	91	78.049	Microcebus_murinus
ENSPCAG00000016885	SNRPC	90	98.726	ENSMICG00000032183	-	99	98.726	Microcebus_murinus
ENSPCAG00000016885	SNRPC	100	92.179	ENSMICG00000007339	-	99	98.726	Microcebus_murinus
ENSPCAG00000016885	SNRPC	90	98.726	ENSMOCG00000017609	Snrpc	99	98.726	Microtus_ochrogaster
ENSPCAG00000016885	SNRPC	90	98.089	ENSMODG00000013904	-	99	98.089	Monodelphis_domestica
ENSPCAG00000016885	SNRPC	90	65.605	ENSMALG00000001197	snrpc	100	65.244	Monopterus_albus
ENSPCAG00000016885	SNRPC	90	98.726	MGP_CAROLIEiJ_G0021308	Snrpc	99	98.726	Mus_caroli
ENSPCAG00000016885	SNRPC	90	98.726	ENSMUSG00000024217	Snrpc	99	98.726	Mus_musculus
ENSPCAG00000016885	SNRPC	66	98.276	MGP_SPRETEiJ_G0022221	-	97	98.276	Mus_spretus
ENSPCAG00000016885	SNRPC	91	99.371	ENSMPUG00000003210	SNRPC	100	99.371	Mustela_putorius_furo
ENSPCAG00000016885	SNRPC	91	99.371	ENSMLUG00000002488	SNRPC	100	99.371	Myotis_lucifugus
ENSPCAG00000016885	SNRPC	90	98.726	ENSNGAG00000019686	Snrpc	99	98.726	Nannospalax_galili
ENSPCAG00000016885	SNRPC	99	92.222	ENSNLEG00000034810	SNRPC	99	99.363	Nomascus_leucogenys
ENSPCAG00000016885	SNRPC	81	99.296	ENSMEUG00000009300	SNRPC	100	99.296	Notamacropus_eugenii
ENSPCAG00000016885	SNRPC	90	99.363	ENSODEG00000020370	-	99	99.363	Octodon_degus
ENSPCAG00000016885	SNRPC	90	99.363	ENSODEG00000017080	-	99	99.363	Octodon_degus
ENSPCAG00000016885	SNRPC	69	93.388	ENSODEG00000006008	-	88	91.870	Octodon_degus
ENSPCAG00000016885	SNRPC	90	98.726	ENSODEG00000020201	-	99	98.726	Octodon_degus
ENSPCAG00000016885	SNRPC	90	99.363	ENSODEG00000018985	-	99	99.363	Octodon_degus
ENSPCAG00000016885	SNRPC	90	98.089	ENSODEG00000019633	-	99	98.089	Octodon_degus
ENSPCAG00000016885	SNRPC	82	95.270	ENSOANG00000003405	SNRPC	100	95.270	Ornithorhynchus_anatinus
ENSPCAG00000016885	SNRPC	90	96.815	ENSOCUG00000023292	-	99	96.815	Oryctolagus_cuniculus
ENSPCAG00000016885	SNRPC	90	98.089	ENSOCUG00000026430	-	98	98.089	Oryctolagus_cuniculus
ENSPCAG00000016885	SNRPC	90	99.363	ENSOCUG00000026668	-	99	99.363	Oryctolagus_cuniculus
ENSPCAG00000016885	SNRPC	90	97.452	ENSOGAG00000026269	-	99	97.452	Otolemur_garnettii
ENSPCAG00000016885	SNRPC	87	83.660	ENSOGAG00000028405	-	99	80.519	Otolemur_garnettii
ENSPCAG00000016885	SNRPC	89	100.000	ENSOGAG00000008755	-	96	95.882	Otolemur_garnettii
ENSPCAG00000016885	SNRPC	90	99.363	ENSOARG00000010823	SNRPC	99	99.363	Ovis_aries
ENSPCAG00000016885	SNRPC	90	99.363	ENSPPAG00000043871	SNRPC	99	99.363	Pan_paniscus
ENSPCAG00000016885	SNRPC	95	94.767	ENSPPRG00000008647	-	99	99.363	Panthera_pardus
ENSPCAG00000016885	SNRPC	87	60.390	ENSPPRG00000016017	-	86	56.494	Panthera_pardus
ENSPCAG00000016885	SNRPC	95	94.767	ENSPTIG00000021867	-	99	99.363	Panthera_tigris_altaica
ENSPCAG00000016885	SNRPC	87	58.824	ENSPTIG00000013329	-	50	79.221	Panthera_tigris_altaica
ENSPCAG00000016885	SNRPC	90	99.363	ENSPTRG00000018070	SNRPC	99	99.363	Pan_troglodytes
ENSPCAG00000016885	SNRPC	99	91.573	ENSPANG00000022802	-	99	99.363	Papio_anubis
ENSPCAG00000016885	SNRPC	97	82.249	ENSPANG00000018228	-	96	84.756	Papio_anubis
ENSPCAG00000016885	SNRPC	98	88.571	ENSPSIG00000004876	SNRPC	86	88.571	Pelodiscus_sinensis
ENSPCAG00000016885	SNRPC	90	98.726	ENSPEMG00000010773	Snrpc	99	98.726	Peromyscus_maniculatus_bairdii
ENSPCAG00000016885	SNRPC	90	86.624	ENSPEMG00000002763	-	100	83.648	Peromyscus_maniculatus_bairdii
ENSPCAG00000016885	SNRPC	100	93.258	ENSPCOG00000004904	SNRPC	99	99.363	Propithecus_coquereli
ENSPCAG00000016885	SNRPC	95	93.605	ENSPVAG00000015597	SNRPC	95	93.605	Pteropus_vampyrus
ENSPCAG00000016885	SNRPC	90	98.726	ENSRNOG00000000493	Snrpc	99	98.726	Rattus_norvegicus
ENSPCAG00000016885	SNRPC	89	90.323	ENSRBIG00000036353	-	82	89.172	Rhinopithecus_bieti
ENSPCAG00000016885	SNRPC	90	98.726	ENSRBIG00000022998	-	99	98.726	Rhinopithecus_bieti
ENSPCAG00000016885	SNRPC	100	91.667	ENSRBIG00000037567	-	99	99.363	Rhinopithecus_bieti
ENSPCAG00000016885	SNRPC	90	98.726	ENSRBIG00000014819	-	99	98.726	Rhinopithecus_bieti
ENSPCAG00000016885	SNRPC	100	90.556	ENSRROG00000041300	SNRPC	99	99.363	Rhinopithecus_roxellana
ENSPCAG00000016885	SNRPC	89	81.410	ENSSBOG00000032882	-	93	81.410	Saimiri_boliviensis_boliviensis
ENSPCAG00000016885	SNRPC	88	81.818	ENSSBOG00000023189	-	91	80.769	Saimiri_boliviensis_boliviensis
ENSPCAG00000016885	SNRPC	93	77.160	ENSSBOG00000032361	-	66	79.167	Saimiri_boliviensis_boliviensis
ENSPCAG00000016885	SNRPC	90	99.363	ENSSBOG00000031528	-	99	99.363	Saimiri_boliviensis_boliviensis
ENSPCAG00000016885	SNRPC	95	94.152	ENSSHAG00000000945	-	95	94.152	Sarcophilus_harrisii
ENSPCAG00000016885	SNRPC	90	80.255	ENSSFOG00015019150	snrpc	100	79.245	Scleropages_formosus
ENSPCAG00000016885	SNRPC	90	77.070	ENSSARG00000008970	SNRPC	89	76.101	Sorex_araneus
ENSPCAG00000016885	SNRPC	90	97.452	ENSSPUG00000002502	SNRPC	99	97.452	Sphenodon_punctatus
ENSPCAG00000016885	SNRPC	90	99.363	ENSSSCG00000001531	SNRPC	99	99.363	Sus_scrofa
ENSPCAG00000016885	SNRPC	91	98.113	ENSTGUG00000001773	SNRPC	100	98.113	Taeniopygia_guttata
ENSPCAG00000016885	SNRPC	88	72.727	ENSTBEG00000015356	-	68	88.542	Tupaia_belangeri
ENSPCAG00000016885	SNRPC	88	91.558	ENSTBEG00000013022	-	100	90.385	Tupaia_belangeri
ENSPCAG00000016885	SNRPC	81	72.535	ENSTBEG00000016759	-	79	72.535	Tupaia_belangeri
ENSPCAG00000016885	SNRPC	100	92.308	ENSTTRG00000007827	SNRPC	100	92.308	Tursiops_truncatus
ENSPCAG00000016885	SNRPC	67	98.291	ENSUAMG00000014125	SNRPC	79	98.291	Ursus_americanus
ENSPCAG00000016885	SNRPC	90	88.636	ENSUMAG00000010869	SNRPC	99	88.636	Ursus_maritimus
ENSPCAG00000016885	SNRPC	81	74.648	ENSVPAG00000003106	SNRPC	79	74.648	Vicugna_pacos
ENSPCAG00000016885	SNRPC	88	94.805	ENSVVUG00000010467	-	91	92.025	Vulpes_vulpes
ENSPCAG00000016885	SNRPC	90	98.089	ENSVVUG00000021947	-	99	98.089	Vulpes_vulpes
ENSPCAG00000016885	SNRPC	90	89.172	ENSXETG00000024721	snrpc	100	88.050	Xenopus_tropicalis