EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000001259 (Gene tree)
Gene ID: 110198320
Gene Symbol: PARN
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 49791 bases
Position: chrFUWB01003631.1:2203-51993
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000003064	CAF1	PF04857.20	8.7e-78	1	1
ENSPCIP00000002983	CAF1	PF04857.20	2.7e-77	1	1
ENSPCIP00000002975	CAF1	PF04857.20	3e-77	1	1
ENSPCIP00000002786	CAF1	PF04857.20	8.4e-77	1	1
ENSPCIP00000003282	CAF1	PF04857.20	5.9e-76	1	1
ENSPCIP00000003294	CAF1	PF04857.20	3.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000003481	PARN-201	1350	-	ENSPCIP00000002786	449 (aa)	-	-
ENSPCIT00000004073	PARN-205	1518	-	ENSPCIP00000003282	505 (aa)	-	-
ENSPCIT00000004085	PARN-206	198	-	ENSPCIP00000003294	65 (aa)	-	-
ENSPCIT00000003806	PARN-204	1338	-	ENSPCIP00000003064	445 (aa)	-	-
ENSPCIT00000003714	PARN-203	1326	-	ENSPCIP00000002983	441 (aa)	-	-
ENSPCIT00000003704	PARN-202	1350	-	ENSPCIP00000002975	449 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000001259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000001259's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000001259	PARN	100	92.308	ENSG00000140694	PARN	100	92.308	Homo_sapiens
ENSPCIG00000001259	PARN	92	78.333	ENSAPOG00000019730	-	99	65.297	Acanthochromis_polyacanthus
ENSPCIG00000001259	PARN	91	93.220	ENSAMEG00000011208	PARN	66	85.613	Ailuropoda_melanoleuca
ENSPCIG00000001259	PARN	92	78.333	ENSACIG00000000619	parn	84	71.642	Amphilophus_citrinellus
ENSPCIG00000001259	PARN	91	77.966	ENSAOCG00000003465	parn	62	72.196	Amphiprion_ocellaris
ENSPCIG00000001259	PARN	78	70.572	ENSAPEG00000010661	parn	69	70.845	Amphiprion_percula
ENSPCIG00000001259	PARN	91	76.271	ENSATEG00000004661	parn	62	73.131	Anabas_testudineus
ENSPCIG00000001259	PARN	91	83.014	ENSAPLG00000013914	PARN	66	83.254	Anas_platyrhynchos
ENSPCIG00000001259	PARN	91	88.136	ENSACAG00000004973	PARN	65	80.189	Anolis_carolinensis
ENSPCIG00000001259	PARN	100	92.308	ENSANAG00000031516	PARN	100	92.308	Aotus_nancymaae
ENSPCIG00000001259	PARN	91	77.966	ENSACLG00000004742	parn	62	72.664	Astatotilapia_calliptera
ENSPCIG00000001259	PARN	91	77.966	ENSAMXG00000012390	parn	68	68.558	Astyanax_mexicanus
ENSPCIG00000001259	PARN	91	93.220	ENSBTAG00000018097	PARN	65	90.617	Bos_taurus
ENSPCIG00000001259	PARN	100	92.308	ENSCJAG00000015866	PARN	100	92.308	Callithrix_jacchus
ENSPCIG00000001259	PARN	91	89.831	ENSCAFG00000018795	PARN	66	85.343	Canis_familiaris
ENSPCIG00000001259	PARN	91	91.525	ENSCAFG00020024126	PARN	66	85.343	Canis_lupus_dingo
ENSPCIG00000001259	PARN	91	93.220	ENSCHIG00000018143	PARN	66	86.761	Capra_hircus
ENSPCIG00000001259	PARN	90	56.174	ENSCAPG00000007984	PARN	70	57.606	Cavia_aperea
ENSPCIG00000001259	PARN	91	89.831	ENSCPOG00000002263	PARN	66	85.106	Cavia_porcellus
ENSPCIG00000001259	PARN	100	92.308	ENSCCAG00000030367	PARN	100	92.308	Cebus_capucinus
ENSPCIG00000001259	PARN	91	91.525	ENSCATG00000041368	PARN	76	86.761	Cercocebus_atys
ENSPCIG00000001259	PARN	91	88.136	ENSCLAG00000015406	PARN	66	84.870	Chinchilla_lanigera
ENSPCIG00000001259	PARN	91	91.525	ENSCSAG00000008142	PARN	66	86.998	Chlorocebus_sabaeus
ENSPCIG00000001259	PARN	80	94.231	ENSCHOG00000007014	PARN	68	72.530	Choloepus_hoffmanni
ENSPCIG00000001259	PARN	78	83.149	ENSCPBG00000006609	PARN	62	83.425	Chrysemys_picta_bellii
ENSPCIG00000001259	PARN	88	45.614	ENSCING00000010142	-	84	39.690	Ciona_intestinalis
ENSPCIG00000001259	PARN	91	91.525	ENSCANG00000028849	-	65	80.542	Colobus_angolensis_palliatus
ENSPCIG00000001259	PARN	91	91.525	ENSCANG00000023734	-	94	78.365	Colobus_angolensis_palliatus
ENSPCIG00000001259	PARN	91	91.525	ENSCGRG00001012096	Parn	66	80.851	Cricetulus_griseus_chok1gshd
ENSPCIG00000001259	PARN	91	91.525	ENSCGRG00000004939	Parn	66	80.851	Cricetulus_griseus_crigri
ENSPCIG00000001259	PARN	91	77.966	ENSCSEG00000002064	parn	99	60.274	Cynoglossus_semilaevis
ENSPCIG00000001259	PARN	91	77.966	ENSCVAG00000014848	parn	62	72.170	Cyprinodon_variegatus
ENSPCIG00000001259	PARN	91	69.492	ENSDARG00000102634	parn	98	63.158	Danio_rerio
ENSPCIG00000001259	PARN	91	93.220	ENSDNOG00000000833	PARN	74	86.998	Dasypus_novemcinctus
ENSPCIG00000001259	PARN	91	91.525	ENSDORG00000027812	-	94	81.731	Dipodomys_ordii
ENSPCIG00000001259	PARN	92	86.667	ENSETEG00000014828	-	53	91.935	Echinops_telfairi
ENSPCIG00000001259	PARN	91	93.220	ENSEASG00005011400	PARN	66	86.288	Equus_asinus_asinus
ENSPCIG00000001259	PARN	91	91.525	ENSECAG00000017792	PARN	66	85.816	Equus_caballus
ENSPCIG00000001259	PARN	91	79.661	ENSELUG00000013139	parn	56	71.429	Esox_lucius
ENSPCIG00000001259	PARN	91	91.525	ENSFCAG00000044961	PARN	66	86.525	Felis_catus
ENSPCIG00000001259	PARN	90	82.692	ENSFALG00000003911	PARN	64	82.933	Ficedula_albicollis
ENSPCIG00000001259	PARN	91	89.831	ENSFDAG00000009234	PARN	67	85.106	Fukomys_damarensis
ENSPCIG00000001259	PARN	98	71.875	ENSFHEG00000013738	parn	100	71.875	Fundulus_heteroclitus
ENSPCIG00000001259	PARN	91	77.966	ENSGMOG00000003231	parn	77	70.561	Gadus_morhua
ENSPCIG00000001259	PARN	91	89.831	ENSGALG00000003091	PARN	66	83.924	Gallus_gallus
ENSPCIG00000001259	PARN	91	79.661	ENSGAFG00000011061	parn	62	72.170	Gambusia_affinis
ENSPCIG00000001259	PARN	91	74.576	ENSGACG00000019501	parn	68	70.794	Gasterosteus_aculeatus
ENSPCIG00000001259	PARN	100	92.308	ENSGGOG00000025224	PARN	100	92.308	Gorilla_gorilla
ENSPCIG00000001259	PARN	91	77.966	ENSHBUG00000017906	parn	71	72.600	Haplochromis_burtoni
ENSPCIG00000001259	PARN	91	89.831	ENSHGLG00000010886	PARN	66	84.161	Heterocephalus_glaber_female
ENSPCIG00000001259	PARN	91	89.831	ENSHGLG00100014659	PARN	66	84.161	Heterocephalus_glaber_male
ENSPCIG00000001259	PARN	80	84.615	ENSHCOG00000008683	parn	72	65.802	Hippocampus_comes
ENSPCIG00000001259	PARN	91	69.492	ENSIPUG00000012401	parn	61	65.174	Ictalurus_punctatus
ENSPCIG00000001259	PARN	91	91.525	ENSSTOG00000007519	PARN	67	85.816	Ictidomys_tridecemlineatus
ENSPCIG00000001259	PARN	91	93.220	ENSJJAG00000023049	Parn	67	84.161	Jaculus_jaculus
ENSPCIG00000001259	PARN	91	76.271	ENSKMAG00000009462	parn	62	72.406	Kryptolebias_marmoratus
ENSPCIG00000001259	PARN	91	77.966	ENSLBEG00000009167	parn	66	71.495	Labrus_bergylta
ENSPCIG00000001259	PARN	92	72.028	ENSLACG00000004207	PARN	100	72.261	Latimeria_chalumnae
ENSPCIG00000001259	PARN	91	79.661	ENSLOCG00000000715	parn	62	74.473	Lepisosteus_oculatus
ENSPCIG00000001259	PARN	91	93.220	ENSLAFG00000015036	PARN	67	85.343	Loxodonta_africana
ENSPCIG00000001259	PARN	91	91.525	ENSMFAG00000044852	PARN	65	87.864	Macaca_fascicularis
ENSPCIG00000001259	PARN	91	91.525	ENSMMUG00000018849	PARN	66	86.998	Macaca_mulatta
ENSPCIG00000001259	PARN	91	91.525	ENSMNEG00000045108	PARN	66	86.998	Macaca_nemestrina
ENSPCIG00000001259	PARN	91	91.525	ENSMLEG00000031743	PARN	66	86.761	Mandrillus_leucophaeus
ENSPCIG00000001259	PARN	91	77.966	ENSMAMG00000006939	parn	61	71.262	Mastacembelus_armatus
ENSPCIG00000001259	PARN	91	77.966	ENSMZEG00005013590	parn	72	68.519	Maylandia_zebra
ENSPCIG00000001259	PARN	86	82.456	ENSMGAG00000001004	PARN	63	82.707	Meleagris_gallopavo
ENSPCIG00000001259	PARN	92	73.148	ENSMAUG00000008025	Parn	66	73.380	Mesocricetus_auratus
ENSPCIG00000001259	PARN	100	93.846	ENSMICG00000016053	PARN	100	93.846	Microcebus_murinus
ENSPCIG00000001259	PARN	91	91.525	ENSMOCG00000022211	Parn	85	80.615	Microtus_ochrogaster
ENSPCIG00000001259	PARN	91	79.661	ENSMMOG00000011333	parn	68	70.047	Mola_mola
ENSPCIG00000001259	PARN	92	98.333	ENSMODG00000004915	PARN	85	91.294	Monodelphis_domestica
ENSPCIG00000001259	PARN	91	76.667	ENSMALG00000019426	parn	72	71.562	Monopterus_albus
ENSPCIG00000001259	PARN	91	91.525	MGP_CAROLIEiJ_G0020466	Parn	67	80.142	Mus_caroli
ENSPCIG00000001259	PARN	91	89.831	ENSMUSG00000022685	Parn	100	90.244	Mus_musculus
ENSPCIG00000001259	PARN	91	91.525	MGP_PahariEiJ_G0016172	Parn	67	79.905	Mus_pahari
ENSPCIG00000001259	PARN	91	91.525	MGP_SPRETEiJ_G0021361	Parn	67	80.142	Mus_spretus
ENSPCIG00000001259	PARN	91	93.220	ENSMPUG00000014464	PARN	66	86.525	Mustela_putorius_furo
ENSPCIG00000001259	PARN	91	89.831	ENSMLUG00000005414	PARN	86	83.645	Myotis_lucifugus
ENSPCIG00000001259	PARN	91	93.220	ENSNGAG00000024082	-	94	81.731	Nannospalax_galili
ENSPCIG00000001259	PARN	91	77.966	ENSNBRG00000006805	parn	71	71.462	Neolamprologus_brichardi
ENSPCIG00000001259	PARN	100	92.308	ENSNLEG00000010241	PARN	100	92.308	Nomascus_leucogenys
ENSPCIG00000001259	PARN	80	96.154	ENSMEUG00000008178	-	64	63.636	Notamacropus_eugenii
ENSPCIG00000001259	PARN	90	85.096	ENSOPRG00000012187	PARN	66	85.337	Ochotona_princeps
ENSPCIG00000001259	PARN	91	89.831	ENSODEG00000001617	PARN	67	78.271	Octodon_degus
ENSPCIG00000001259	PARN	91	77.966	ENSONIG00000000151	parn	65	72.664	Oreochromis_niloticus
ENSPCIG00000001259	PARN	91	84.762	ENSOCUG00000000322	PARN	66	85.203	Oryctolagus_cuniculus
ENSPCIG00000001259	PARN	100	76.923	ENSORLG00000024893	-	99	61.818	Oryzias_latipes
ENSPCIG00000001259	PARN	91	79.661	ENSORLG00020010313	parn	63	71.226	Oryzias_latipes_hni
ENSPCIG00000001259	PARN	91	79.661	ENSORLG00015000300	parn	63	70.991	Oryzias_latipes_hsok
ENSPCIG00000001259	PARN	91	79.661	ENSOMEG00000019555	parn	91	65.385	Oryzias_melastigma
ENSPCIG00000001259	PARN	92	90.000	ENSOGAG00000014626	PARN	86	83.059	Otolemur_garnettii
ENSPCIG00000001259	PARN	91	93.220	ENSOARG00000007574	PARN	86	86.557	Ovis_aries
ENSPCIG00000001259	PARN	100	92.308	ENSPPAG00000031438	PARN	100	92.308	Pan_paniscus
ENSPCIG00000001259	PARN	91	91.525	ENSPPRG00000018583	PARN	66	86.525	Panthera_pardus
ENSPCIG00000001259	PARN	91	91.525	ENSPTIG00000012135	PARN	66	86.525	Panthera_tigris_altaica
ENSPCIG00000001259	PARN	100	92.308	ENSPTRG00000007792	PARN	100	92.308	Pan_troglodytes
ENSPCIG00000001259	PARN	91	91.525	ENSPANG00000020099	PARN	66	83.894	Papio_anubis
ENSPCIG00000001259	PARN	91	77.966	ENSPKIG00000022807	parn	67	67.689	Paramormyrops_kingsleyae
ENSPCIG00000001259	PARN	56	30.000	ENSPSIG00000011419	PNLDC1	79	30.000	Pelodiscus_sinensis
ENSPCIG00000001259	PARN	91	86.441	ENSPSIG00000014804	PARN	66	82.979	Pelodiscus_sinensis
ENSPCIG00000001259	PARN	91	76.271	ENSPMGG00000014431	parn	58	71.394	Periophthalmus_magnuspinnatus
ENSPCIG00000001259	PARN	91	91.525	ENSPEMG00000018439	Parn	66	77.778	Peromyscus_maniculatus_bairdii
ENSPCIG00000001259	PARN	92	59.441	ENSPMAG00000003956	parn	80	60.000	Petromyzon_marinus
ENSPCIG00000001259	PARN	91	79.661	ENSPFOG00000012823	parn	62	71.934	Poecilia_formosa
ENSPCIG00000001259	PARN	91	79.661	ENSPLAG00000006395	parn	62	72.170	Poecilia_latipinna
ENSPCIG00000001259	PARN	91	79.661	ENSPMEG00000007711	parn	62	72.170	Poecilia_mexicana
ENSPCIG00000001259	PARN	91	79.661	ENSPREG00000000147	parn	62	71.934	Poecilia_reticulata
ENSPCIG00000001259	PARN	91	89.831	ENSPPYG00000007123	PARN	66	86.353	Pongo_abelii
ENSPCIG00000001259	PARN	70	30.124	ENSPCAG00000014169	PNLDC1	55	30.189	Procavia_capensis
ENSPCIG00000001259	PARN	84	76.923	ENSPCAG00000001741	PARN	65	76.726	Procavia_capensis
ENSPCIG00000001259	PARN	100	93.846	ENSPCOG00000019292	PARN	100	93.846	Propithecus_coquereli
ENSPCIG00000001259	PARN	90	85.990	ENSPVAG00000002547	PARN	65	85.990	Pteropus_vampyrus
ENSPCIG00000001259	PARN	91	77.966	ENSPNYG00000006835	parn	71	68.852	Pundamilia_nyererei
ENSPCIG00000001259	PARN	81	69.554	ENSPNAG00000018905	parn	62	69.816	Pygocentrus_nattereri
ENSPCIG00000001259	PARN	91	89.831	ENSRNOG00000002912	Parn	98	85.859	Rattus_norvegicus
ENSPCIG00000001259	PARN	92	90.000	ENSRROG00000020116	-	86	90.164	Rhinopithecus_roxellana
ENSPCIG00000001259	PARN	91	91.525	ENSSBOG00000034726	PARN	65	87.981	Saimiri_boliviensis_boliviensis
ENSPCIG00000001259	PARN	90	91.106	ENSSHAG00000008493	PARN	99	86.907	Sarcophilus_harrisii
ENSPCIG00000001259	PARN	91	81.356	ENSSFOG00015014165	parn	70	71.831	Scleropages_formosus
ENSPCIG00000001259	PARN	91	76.271	ENSSMAG00000000685	parn	69	66.820	Scophthalmus_maximus
ENSPCIG00000001259	PARN	91	76.271	ENSSDUG00000014555	parn	61	71.963	Seriola_dumerili
ENSPCIG00000001259	PARN	91	76.271	ENSSLDG00000007603	-	99	60.274	Seriola_lalandi_dorsalis
ENSPCIG00000001259	PARN	78	84.615	ENSSARG00000014339	PARN	63	84.890	Sorex_araneus
ENSPCIG00000001259	PARN	91	86.441	ENSSPUG00000007719	PARN	66	84.634	Sphenodon_punctatus
ENSPCIG00000001259	PARN	91	77.966	ENSSPAG00000007095	parn	62	73.364	Stegastes_partitus
ENSPCIG00000001259	PARN	91	93.220	ENSSSCG00000007878	PARN	59	86.761	Sus_scrofa
ENSPCIG00000001259	PARN	91	82.381	ENSTGUG00000004971	PARN	65	83.213	Taeniopygia_guttata
ENSPCIG00000001259	PARN	100	72.727	ENSTRUG00000015208	-	97	82.828	Takifugu_rubripes
ENSPCIG00000001259	PARN	91	79.661	ENSTNIG00000008252	parn	72	68.192	Tetraodon_nigroviridis
ENSPCIG00000001259	PARN	78	64.917	ENSTBEG00000010407	PARN	62	64.917	Tupaia_belangeri
ENSPCIG00000001259	PARN	90	85.817	ENSTTRG00000002843	PARN	66	86.058	Tursiops_truncatus
ENSPCIG00000001259	PARN	78	77.101	ENSUAMG00000008283	PARN	78	74.184	Ursus_americanus
ENSPCIG00000001259	PARN	91	93.220	ENSUMAG00000004527	PARN	66	86.052	Ursus_maritimus
ENSPCIG00000001259	PARN	80	94.231	ENSVPAG00000008968	PARN	68	82.212	Vicugna_pacos
ENSPCIG00000001259	PARN	91	91.525	ENSVVUG00000019509	PARN	66	85.816	Vulpes_vulpes
ENSPCIG00000001259	PARN	91	88.136	ENSXETG00000010994	parn	80	76.581	Xenopus_tropicalis
ENSPCIG00000001259	PARN	91	79.661	ENSXCOG00000015990	parn	67	71.465	Xiphophorus_couchianus
ENSPCIG00000001259	PARN	91	79.661	ENSXMAG00000014783	parn	62	72.170	Xiphophorus_maculatus