EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000001339 (Gene tree)
Gene ID: 110221469
Gene Symbol: BMS1
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 37015 bases
Position: chrFUWB01000582.1:1389356-1426370
Accession: 110221469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000001704	AARP2CN	PF08142.12	1.7e-30	1	1
ENSPCIP00000001723	AARP2CN	PF08142.12	1.8e-30	1	1
ENSPCIP00000001679	AARP2CN	PF08142.12	1.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000002134	BMS1-202	3743	-	ENSPCIP00000001704	1238 (aa)	-	-
ENSPCIT00000002163	BMS1-203	3584	-	ENSPCIP00000001723	1185 (aa)	-	-
ENSPCIT00000002106	BMS1-201	4156	XM_021006128	ENSPCIP00000001679	1301 (aa)	XP_020861787	-

Gene Model

Click here to download ENSPCIG00000001339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000001339's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000001339	BMS1	99	86.761	ENSG00000165733	BMS1	95	92.617	Homo_sapiens
ENSPCIG00000001339	BMS1	69	72.069	ENSAPOG00000002296	bms1	86	67.040	Acanthochromis_polyacanthus
ENSPCIG00000001339	BMS1	99	86.723	ENSAMEG00000016834	BMS1	95	92.715	Ailuropoda_melanoleuca
ENSPCIG00000001339	BMS1	85	73.803	ENSACIG00000002588	bms1	85	77.307	Amphilophus_citrinellus
ENSPCIG00000001339	BMS1	81	72.958	ENSAOCG00000018088	bms1	66	67.846	Amphiprion_ocellaris
ENSPCIG00000001339	BMS1	80	69.936	ENSAPEG00000014673	bms1	66	67.042	Amphiprion_percula
ENSPCIG00000001339	BMS1	88	68.700	ENSATEG00000023465	bms1	65	68.218	Anabas_testudineus
ENSPCIG00000001339	BMS1	95	85.235	ENSAPLG00000003759	BMS1	90	86.047	Anas_platyrhynchos
ENSPCIG00000001339	BMS1	99	82.222	ENSACAG00000004537	-	90	82.451	Anolis_carolinensis
ENSPCIG00000001339	BMS1	98	85.352	ENSANAG00000023432	BMS1	95	93.289	Aotus_nancymaae
ENSPCIG00000001339	BMS1	85	74.648	ENSACLG00000001294	bms1	96	69.231	Astatotilapia_calliptera
ENSPCIG00000001339	BMS1	80	68.058	ENSAMXG00000011236	bms1	66	67.213	Astyanax_mexicanus
ENSPCIG00000001339	BMS1	98	87.853	ENSBTAG00000012878	BMS1	95	93.960	Bos_taurus
ENSPCIG00000001339	BMS1	80	51.716	WBGene00022021	Y61A9LA.10	98	50.235	Caenorhabditis_elegans
ENSPCIG00000001339	BMS1	98	86.761	ENSCJAG00000021705	BMS1	95	93.960	Callithrix_jacchus
ENSPCIG00000001339	BMS1	99	93.289	ENSCAFG00000007114	BMS1	95	93.289	Canis_familiaris
ENSPCIG00000001339	BMS1	99	93.289	ENSCAFG00020025282	BMS1	95	93.289	Canis_lupus_dingo
ENSPCIG00000001339	BMS1	98	87.288	ENSCHIG00000023251	BMS1	95	93.960	Capra_hircus
ENSPCIG00000001339	BMS1	99	89.933	ENSCAPG00000008652	BMS1	95	89.933	Cavia_aperea
ENSPCIG00000001339	BMS1	99	91.946	ENSCPOG00000000502	BMS1	95	91.946	Cavia_porcellus
ENSPCIG00000001339	BMS1	98	74.366	ENSCCAG00000024969	-	90	74.576	Cebus_capucinus
ENSPCIG00000001339	BMS1	98	86.761	ENSCATG00000030625	-	95	93.960	Cercocebus_atys
ENSPCIG00000001339	BMS1	88	75.862	ENSCATG00000008695	-	86	76.496	Cercocebus_atys
ENSPCIG00000001339	BMS1	99	91.946	ENSCLAG00000002446	BMS1	95	91.946	Chinchilla_lanigera
ENSPCIG00000001339	BMS1	98	86.761	ENSCSAG00000011118	BMS1	95	93.960	Chlorocebus_sabaeus
ENSPCIG00000001339	BMS1	99	93.960	ENSCHOG00000011055	BMS1	95	93.960	Choloepus_hoffmanni
ENSPCIG00000001339	BMS1	99	84.722	ENSCPBG00000025581	BMS1	95	89.262	Chrysemys_picta_bellii
ENSPCIG00000001339	BMS1	77	59.367	ENSCING00000003181	-	96	59.367	Ciona_intestinalis
ENSPCIG00000001339	BMS1	59	63.636	ENSCSAVG00000004113	-	82	63.636	Ciona_savignyi
ENSPCIG00000001339	BMS1	99	86.761	ENSCANG00000011609	BMS1	95	93.289	Colobus_angolensis_palliatus
ENSPCIG00000001339	BMS1	98	85.915	ENSCGRG00001019461	Bms1	95	90.604	Cricetulus_griseus_chok1gshd
ENSPCIG00000001339	BMS1	98	85.915	ENSCGRG00000009016	Bms1	95	90.604	Cricetulus_griseus_crigri
ENSPCIG00000001339	BMS1	80	74.232	ENSCSEG00000002469	bms1	85	73.903	Cynoglossus_semilaevis
ENSPCIG00000001339	BMS1	79	75.895	ENSCVAG00000008371	bms1	99	66.817	Cyprinodon_variegatus
ENSPCIG00000001339	BMS1	81	73.455	ENSDARG00000054154	bms1	93	66.981	Danio_rerio
ENSPCIG00000001339	BMS1	98	87.288	ENSDNOG00000015761	BMS1	95	92.617	Dasypus_novemcinctus
ENSPCIG00000001339	BMS1	99	91.946	ENSDORG00000002982	Bms1	95	91.946	Dipodomys_ordii
ENSPCIG00000001339	BMS1	75	60.000	FBgn0036686	CG7728	88	57.702	Drosophila_melanogaster
ENSPCIG00000001339	BMS1	81	90.164	ENSETEG00000009554	BMS1	79	91.667	Echinops_telfairi
ENSPCIG00000001339	BMS1	98	86.441	ENSEASG00005006894	BMS1	95	93.289	Equus_asinus_asinus
ENSPCIG00000001339	BMS1	98	86.723	ENSECAG00000001358	BMS1	95	93.289	Equus_caballus
ENSPCIG00000001339	BMS1	98	72.394	ENSELUG00000001756	bms1	87	76.056	Esox_lucius
ENSPCIG00000001339	BMS1	99	86.517	ENSFCAG00000011220	BMS1	95	93.289	Felis_catus
ENSPCIG00000001339	BMS1	99	85.906	ENSFALG00000006882	BMS1	99	72.914	Ficedula_albicollis
ENSPCIG00000001339	BMS1	99	91.946	ENSFDAG00000001422	BMS1	90	85.674	Fukomys_damarensis
ENSPCIG00000001339	BMS1	82	74.085	ENSFHEG00000003367	bms1	98	67.023	Fundulus_heteroclitus
ENSPCIG00000001339	BMS1	88	69.274	ENSGMOG00000000718	bms1	87	74.939	Gadus_morhua
ENSPCIG00000001339	BMS1	99	63.504	ENSGALG00000002624	BMS1	95	86.577	Gallus_gallus
ENSPCIG00000001339	BMS1	99	71.229	ENSGACG00000015334	bms1	83	71.558	Gasterosteus_aculeatus
ENSPCIG00000001339	BMS1	99	84.507	ENSGAGG00000003467	BMS1	90	84.746	Gopherus_agassizii
ENSPCIG00000001339	BMS1	85	74.648	ENSHBUG00000022628	bms1	96	69.231	Haplochromis_burtoni
ENSPCIG00000001339	BMS1	99	93.289	ENSHGLG00000000477	BMS1	95	93.289	Heterocephalus_glaber_female
ENSPCIG00000001339	BMS1	99	93.289	ENSHGLG00100002176	BMS1	95	93.289	Heterocephalus_glaber_male
ENSPCIG00000001339	BMS1	87	72.676	ENSHCOG00000017604	bms1	97	66.453	Hippocampus_comes
ENSPCIG00000001339	BMS1	99	60.279	ENSIPUG00000017855	bms1	68	73.138	Ictalurus_punctatus
ENSPCIG00000001339	BMS1	98	87.042	ENSSTOG00000015063	BMS1	95	92.617	Ictidomys_tridecemlineatus
ENSPCIG00000001339	BMS1	99	84.270	ENSJJAG00000017328	Bms1	95	93.289	Jaculus_jaculus
ENSPCIG00000001339	BMS1	56	66.294	ENSKMAG00000021982	bms1	90	67.179	Kryptolebias_marmoratus
ENSPCIG00000001339	BMS1	80	71.330	ENSLBEG00000028208	bms1	95	66.773	Labrus_bergylta
ENSPCIG00000001339	BMS1	98	70.349	ENSLACG00000001600	BMS1	95	83.221	Latimeria_chalumnae
ENSPCIG00000001339	BMS1	79	75.229	ENSLOCG00000012914	bms1	66	68.720	Lepisosteus_oculatus
ENSPCIG00000001339	BMS1	99	93.960	ENSLAFG00000006250	BMS1	95	93.960	Loxodonta_africana
ENSPCIG00000001339	BMS1	80	93.960	ENSMFAG00000037771	BMS1	91	93.960	Macaca_fascicularis
ENSPCIG00000001339	BMS1	87	80.435	ENSMMUG00000007426	-	87	78.992	Macaca_mulatta
ENSPCIG00000001339	BMS1	82	74.269	ENSMLEG00000029084	-	86	74.269	Mandrillus_leucophaeus
ENSPCIG00000001339	BMS1	98	73.239	ENSMAMG00000020855	bms1	88	71.461	Mastacembelus_armatus
ENSPCIG00000001339	BMS1	85	74.648	ENSMZEG00005005663	bms1	98	64.925	Maylandia_zebra
ENSPCIG00000001339	BMS1	94	83.662	ENSMGAG00000001170	BMS1	94	93.407	Meleagris_gallopavo
ENSPCIG00000001339	BMS1	98	85.352	ENSMAUG00000002195	Bms1	95	91.275	Mesocricetus_auratus
ENSPCIG00000001339	BMS1	99	85.915	ENSMICG00000009977	BMS1	95	92.617	Microcebus_murinus
ENSPCIG00000001339	BMS1	98	85.434	ENSMOCG00000002038	Bms1	95	89.933	Microtus_ochrogaster
ENSPCIG00000001339	BMS1	83	72.113	ENSMMOG00000000977	bms1	96	68.123	Mola_mola
ENSPCIG00000001339	BMS1	99	95.592	ENSMODG00000001177	BMS1	95	97.987	Monodelphis_domestica
ENSPCIG00000001339	BMS1	97	72.676	ENSMALG00000009680	bms1	91	74.253	Monopterus_albus
ENSPCIG00000001339	BMS1	72	89.588	MGP_CAROLIEiJ_G0028785	-	79	94.118	Mus_caroli
ENSPCIG00000001339	BMS1	98	85.634	ENSMUSG00000030138	Bms1	95	91.275	Mus_musculus
ENSPCIG00000001339	BMS1	98	86.197	MGP_PahariEiJ_G0022539	Bms1	95	90.604	Mus_pahari
ENSPCIG00000001339	BMS1	98	85.634	MGP_SPRETEiJ_G0029816	Bms1	95	91.275	Mus_spretus
ENSPCIG00000001339	BMS1	99	86.441	ENSMPUG00000017276	BMS1	95	93.960	Mustela_putorius_furo
ENSPCIG00000001339	BMS1	98	83.898	ENSMLUG00000003260	BMS1	99	76.816	Myotis_lucifugus
ENSPCIG00000001339	BMS1	97	86.197	ENSNGAG00000015258	Bms1	89	86.441	Nannospalax_galili
ENSPCIG00000001339	BMS1	99	82.254	ENSNLEG00000015791	BMS1	95	93.960	Nomascus_leucogenys
ENSPCIG00000001339	BMS1	79	89.933	ENSOPRG00000005195	BMS1	81	88.836	Ochotona_princeps
ENSPCIG00000001339	BMS1	99	92.617	ENSODEG00000005554	BMS1	95	92.617	Octodon_degus
ENSPCIG00000001339	BMS1	88	74.085	ENSONIG00000007227	bms1	96	68.167	Oreochromis_niloticus
ENSPCIG00000001339	BMS1	99	88.301	ENSOANG00000000662	-	95	92.617	Ornithorhynchus_anatinus
ENSPCIG00000001339	BMS1	99	85.434	ENSOCUG00000005354	BMS1	95	93.289	Oryctolagus_cuniculus
ENSPCIG00000001339	BMS1	81	73.543	ENSORLG00000014655	bms1	96	68.174	Oryzias_latipes
ENSPCIG00000001339	BMS1	81	73.243	ENSORLG00020016246	bms1	86	73.516	Oryzias_latipes_hni
ENSPCIG00000001339	BMS1	81	73.198	ENSORLG00015014183	bms1	94	67.747	Oryzias_latipes_hsok
ENSPCIG00000001339	BMS1	85	73.729	ENSOMEG00000015042	bms1	95	68.821	Oryzias_melastigma
ENSPCIG00000001339	BMS1	99	87.324	ENSOGAG00000006511	BMS1	95	92.053	Otolemur_garnettii
ENSPCIG00000001339	BMS1	98	87.288	ENSOARG00000003900	BMS1	95	91.503	Ovis_aries
ENSPCIG00000001339	BMS1	99	75.328	ENSPPAG00000027837	BMS1	95	93.289	Pan_paniscus
ENSPCIG00000001339	BMS1	99	86.517	ENSPPRG00000001311	BMS1	95	93.289	Panthera_pardus
ENSPCIG00000001339	BMS1	99	80.618	ENSPTIG00000009652	BMS1	95	93.289	Panthera_tigris_altaica
ENSPCIG00000001339	BMS1	99	86.761	ENSPTRG00000002441	BMS1	95	93.289	Pan_troglodytes
ENSPCIG00000001339	BMS1	80	68.850	ENSPKIG00000008165	bms1	62	68.211	Paramormyrops_kingsleyae
ENSPCIG00000001339	BMS1	99	84.167	ENSPSIG00000006481	BMS1	94	87.919	Pelodiscus_sinensis
ENSPCIG00000001339	BMS1	98	72.155	ENSPEMG00000022467	Bms1	95	91.275	Peromyscus_maniculatus_bairdii
ENSPCIG00000001339	BMS1	78	74.201	ENSPFOG00000015180	bms1	95	68.174	Poecilia_formosa
ENSPCIG00000001339	BMS1	78	74.447	ENSPMEG00000023176	bms1	90	68.336	Poecilia_mexicana
ENSPCIG00000001339	BMS1	78	73.580	ENSPREG00000002695	bms1	89	72.184	Poecilia_reticulata
ENSPCIG00000001339	BMS1	67	74.811	ENSPPYG00000002836	-	92	93.289	Pongo_abelii
ENSPCIG00000001339	BMS1	72	91.156	ENSPCAG00000014528	BMS1	66	91.156	Procavia_capensis
ENSPCIG00000001339	BMS1	92	85.352	ENSPCOG00000023834	-	94	95.556	Propithecus_coquereli
ENSPCIG00000001339	BMS1	98	84.463	ENSPVAG00000000725	BMS1	90	84.703	Pteropus_vampyrus
ENSPCIG00000001339	BMS1	84	74.648	ENSPNYG00000018866	bms1	88	65.607	Pundamilia_nyererei
ENSPCIG00000001339	BMS1	81	69.673	ENSPNAG00000000676	bms1	97	68.715	Pygocentrus_nattereri
ENSPCIG00000001339	BMS1	79	93.443	ENSRNOG00000006576	Bms1	94	89.933	Rattus_norvegicus
ENSPCIG00000001339	BMS1	99	86.761	ENSRROG00000040101	BMS1	88	93.013	Rhinopithecus_roxellana
ENSPCIG00000001339	BMS1	67	53.043	YPL217C	-	73	50.812	Saccharomyces_cerevisiae
ENSPCIG00000001339	BMS1	98	87.324	ENSSBOG00000035778	BMS1	95	93.960	Saimiri_boliviensis_boliviensis
ENSPCIG00000001339	BMS1	99	96.639	ENSSHAG00000005062	BMS1	95	99.329	Sarcophilus_harrisii
ENSPCIG00000001339	BMS1	89	75.284	ENSSFOG00015022313	bms1	64	69.872	Scleropages_formosus
ENSPCIG00000001339	BMS1	81	72.082	ENSSMAG00000019966	bms1	67	65.899	Scophthalmus_maximus
ENSPCIG00000001339	BMS1	85	72.676	ENSSDUG00000016875	bms1	87	65.074	Seriola_dumerili
ENSPCIG00000001339	BMS1	85	72.958	ENSSLDG00000015199	bms1	96	67.802	Seriola_lalandi_dorsalis
ENSPCIG00000001339	BMS1	66	80.870	ENSSARG00000014407	BMS1	86	81.223	Sorex_araneus
ENSPCIG00000001339	BMS1	99	86.111	ENSSPUG00000014454	BMS1	95	87.248	Sphenodon_punctatus
ENSPCIG00000001339	BMS1	98	86.798	ENSSSCG00000010198	BMS1	95	93.960	Sus_scrofa
ENSPCIG00000001339	BMS1	99	87.234	ENSTGUG00000006302	-	99	72.907	Taeniopygia_guttata
ENSPCIG00000001339	BMS1	84	69.577	ENSTRUG00000008028	bms1	96	64.791	Takifugu_rubripes
ENSPCIG00000001339	BMS1	98	68.820	ENSTNIG00000006216	bms1	89	65.316	Tetraodon_nigroviridis
ENSPCIG00000001339	BMS1	55	93.651	ENSTBEG00000001673	-	55	93.651	Tupaia_belangeri
ENSPCIG00000001339	BMS1	98	86.441	ENSTTRG00000007983	BMS1	60	90.799	Tursiops_truncatus
ENSPCIG00000001339	BMS1	99	86.723	ENSUAMG00000023996	BMS1	95	93.960	Ursus_americanus
ENSPCIG00000001339	BMS1	99	86.158	ENSUMAG00000016523	BMS1	95	93.960	Ursus_maritimus
ENSPCIG00000001339	BMS1	82	86.723	ENSVPAG00000007477	BMS1	92	88.435	Vicugna_pacos
ENSPCIG00000001339	BMS1	99	93.289	ENSVVUG00000021305	BMS1	95	93.289	Vulpes_vulpes
ENSPCIG00000001339	BMS1	98	79.882	ENSXETG00000008158	bms1	88	79.096	Xenopus_tropicalis
ENSPCIG00000001339	BMS1	88	66.236	ENSXCOG00000000506	bms1	94	76.808	Xiphophorus_couchianus
ENSPCIG00000001339	BMS1	80	72.581	ENSXMAG00000014236	bms1	95	68.123	Xiphophorus_maculatus