EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000002058 (Gene tree)
Gene ID: 110196960
Gene Symbol: RC3H1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 37692 bases
Position: chrFUWB01000066.1:2119614-2157305
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000004166	zf-CCCH	PF00642.24	6.4e-05	1	1
ENSPCIP00000004156	zf-CCCH	PF00642.24	8.1e-05	1	1
ENSPCIP00000004094	zf-CCCH	PF00642.24	0.00016	1	1
ENSPCIP00000003948	zf-CCCH	PF00642.24	0.00017	1	1
ENSPCIP00000004072	zf-CCCH	PF00642.24	0.00018	1	1
ENSPCIP00000004104	zf-CCCH	PF00642.24	0.00018	1	1
ENSPCIP00000004139	zf-CCCH	PF00642.24	0.00018	1	1
ENSPCIP00000004130	zf-CCCH	PF00642.24	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000005173	RC3H1-207	1422	-	ENSPCIP00000004156	473 (aa)	-	-
ENSPCIT00000005146	RC3H1-206	2451	-	ENSPCIP00000004139	816 (aa)	-	-
ENSPCIT00000004919	RC3H1-201	2654	-	ENSPCIP00000003948	800 (aa)	-	-
ENSPCIT00000005087	RC3H1-203	2502	-	ENSPCIP00000004094	833 (aa)	-	-
ENSPCIT00000005098	RC3H1-204	2448	-	ENSPCIP00000004104	815 (aa)	-	-
ENSPCIT00000005190	RC3H1-208	1398	-	ENSPCIP00000004166	465 (aa)	-	-
ENSPCIT00000005133	RC3H1-205	2481	-	ENSPCIP00000004130	826 (aa)	-	-
ENSPCIT00000005059	RC3H1-202	2556	-	ENSPCIP00000004072	851 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000002058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000002058's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000002058	RC3H1	95	83.296	ENSPCIG00000025559	RC3H2	71	57.044

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000002058	RC3H1	95	98.430	ENSG00000135870	RC3H1	70	94.051	Homo_sapiens
ENSPCIG00000002058	RC3H1	95	98.430	ENSAMEG00000015657	RC3H1	70	94.051	Ailuropoda_melanoleuca
ENSPCIG00000002058	RC3H1	95	97.550	ENSAPLG00000005341	RC3H1	71	87.886	Anas_platyrhynchos
ENSPCIG00000002058	RC3H1	95	96.659	ENSACAG00000015271	RC3H1	71	86.757	Anolis_carolinensis
ENSPCIG00000002058	RC3H1	95	98.430	ENSANAG00000036716	RC3H1	70	94.304	Aotus_nancymaae
ENSPCIG00000002058	RC3H1	95	98.655	ENSBTAG00000052708	RC3H1	70	93.797	Bos_taurus
ENSPCIG00000002058	RC3H1	95	98.430	ENSCJAG00000009106	RC3H1	70	94.304	Callithrix_jacchus
ENSPCIG00000002058	RC3H1	95	98.430	ENSCAFG00000014434	RC3H1	70	94.177	Canis_familiaris
ENSPCIG00000002058	RC3H1	95	98.864	ENSCAFG00020017112	RC3H1	100	98.194	Canis_lupus_dingo
ENSPCIG00000002058	RC3H1	95	98.430	ENSCHIG00000002873	RC3H1	71	93.924	Capra_hircus
ENSPCIG00000002058	RC3H1	95	98.430	ENSTSYG00000003913	RC3H1	70	93.679	Carlito_syrichta
ENSPCIG00000002058	RC3H1	95	97.534	ENSCPOG00000004349	RC3H1	69	89.747	Cavia_porcellus
ENSPCIG00000002058	RC3H1	95	98.430	ENSCCAG00000025652	RC3H1	77	92.015	Cebus_capucinus
ENSPCIG00000002058	RC3H1	95	98.430	ENSCATG00000033497	RC3H1	70	94.430	Cercocebus_atys
ENSPCIG00000002058	RC3H1	95	98.206	ENSCLAG00000011267	RC3H1	70	93.426	Chinchilla_lanigera
ENSPCIG00000002058	RC3H1	95	98.430	ENSCSAG00000011823	RC3H1	62	94.311	Chlorocebus_sabaeus
ENSPCIG00000002058	RC3H1	95	97.982	ENSCPBG00000014670	RC3H1	76	88.645	Chrysemys_picta_bellii
ENSPCIG00000002058	RC3H1	95	98.206	ENSCANG00000032120	RC3H1	70	94.304	Colobus_angolensis_palliatus
ENSPCIG00000002058	RC3H1	95	98.206	ENSCGRG00001020812	Rc3h1	70	93.536	Cricetulus_griseus_chok1gshd
ENSPCIG00000002058	RC3H1	95	98.206	ENSCGRG00000011952	Rc3h1	70	93.536	Cricetulus_griseus_crigri
ENSPCIG00000002058	RC3H1	53	87.500	ENSDNOG00000011494	RC3H1	68	88.679	Dasypus_novemcinctus
ENSPCIG00000002058	RC3H1	95	98.206	ENSDORG00000004855	Rc3h1	70	92.785	Dipodomys_ordii
ENSPCIG00000002058	RC3H1	89	93.680	ENSETEG00000012064	RC3H1	68	93.548	Echinops_telfairi
ENSPCIG00000002058	RC3H1	95	98.430	ENSEASG00005017000	RC3H1	70	93.544	Equus_asinus_asinus
ENSPCIG00000002058	RC3H1	95	98.206	ENSECAG00000021208	RC3H1	74	93.418	Equus_caballus
ENSPCIG00000002058	RC3H1	80	96.552	ENSEEUG00000014861	RC3H1	62	82.189	Erinaceus_europaeus
ENSPCIG00000002058	RC3H1	95	98.655	ENSFCAG00000014924	RC3H1	70	94.430	Felis_catus
ENSPCIG00000002058	RC3H1	95	98.206	ENSFALG00000002947	RC3H1	71	86.173	Ficedula_albicollis
ENSPCIG00000002058	RC3H1	95	98.430	ENSFDAG00000013303	RC3H1	70	93.173	Fukomys_damarensis
ENSPCIG00000002058	RC3H1	95	97.982	ENSGALG00000004587	RC3H1	79	88.974	Gallus_gallus
ENSPCIG00000002058	RC3H1	95	98.206	ENSGAGG00000018194	RC3H1	76	87.668	Gopherus_agassizii
ENSPCIG00000002058	RC3H1	95	98.430	ENSGGOG00000005735	RC3H1	75	92.147	Gorilla_gorilla
ENSPCIG00000002058	RC3H1	99	83.051	ENSHGLG00000004183	-	73	85.753	Heterocephalus_glaber_female
ENSPCIG00000002058	RC3H1	95	98.430	ENSHGLG00100008577	RC3H1	70	92.415	Heterocephalus_glaber_male
ENSPCIG00000002058	RC3H1	97	87.013	ENSHCOG00000009753	rc3h1b	93	89.357	Hippocampus_comes
ENSPCIG00000002058	RC3H1	95	98.655	ENSSTOG00000016033	RC3H1	70	93.932	Ictidomys_tridecemlineatus
ENSPCIG00000002058	RC3H1	95	98.206	ENSJJAG00000018915	Rc3h1	70	93.916	Jaculus_jaculus
ENSPCIG00000002058	RC3H1	95	95.740	ENSLACG00000016186	RC3H1	84	80.402	Latimeria_chalumnae
ENSPCIG00000002058	RC3H1	95	98.430	ENSLAFG00000004367	RC3H1	72	95.063	Loxodonta_africana
ENSPCIG00000002058	RC3H1	95	98.430	ENSMFAG00000033725	RC3H1	70	94.430	Macaca_fascicularis
ENSPCIG00000002058	RC3H1	95	98.430	ENSMMUG00000000630	RC3H1	72	94.430	Macaca_mulatta
ENSPCIG00000002058	RC3H1	95	98.430	ENSMNEG00000035968	RC3H1	70	94.430	Macaca_nemestrina
ENSPCIG00000002058	RC3H1	95	98.430	ENSMLEG00000037455	RC3H1	70	94.304	Mandrillus_leucophaeus
ENSPCIG00000002058	RC3H1	95	98.206	ENSMAUG00000020864	Rc3h1	75	93.038	Mesocricetus_auratus
ENSPCIG00000002058	RC3H1	95	98.430	ENSMICG00000003000	RC3H1	70	94.557	Microcebus_murinus
ENSPCIG00000002058	RC3H1	89	92.135	ENSMOCG00000016587	Rc3h1	66	92.135	Microtus_ochrogaster
ENSPCIG00000002058	RC3H1	98	98.352	ENSMODG00000004289	RC3H1	70	98.352	Monodelphis_domestica
ENSPCIG00000002058	RC3H1	95	91.196	ENSMALG00000016581	-	98	91.196	Monopterus_albus
ENSPCIG00000002058	RC3H1	97	89.625	ENSMALG00000016106	rc3h1b	94	89.625	Monopterus_albus
ENSPCIG00000002058	RC3H1	95	98.206	MGP_CAROLIEiJ_G0014756	Rc3h1	70	92.902	Mus_caroli
ENSPCIG00000002058	RC3H1	95	98.206	ENSMUSG00000040423	Rc3h1	70	92.776	Mus_musculus
ENSPCIG00000002058	RC3H1	95	98.206	MGP_PahariEiJ_G0027992	Rc3h1	70	92.902	Mus_pahari
ENSPCIG00000002058	RC3H1	95	98.206	MGP_SPRETEiJ_G0015563	Rc3h1	70	92.776	Mus_spretus
ENSPCIG00000002058	RC3H1	95	98.206	ENSMPUG00000004747	RC3H1	70	93.924	Mustela_putorius_furo
ENSPCIG00000002058	RC3H1	95	97.758	ENSMLUG00000011127	RC3H1	70	92.541	Myotis_lucifugus
ENSPCIG00000002058	RC3H1	95	98.206	ENSNGAG00000011135	Rc3h1	70	93.790	Nannospalax_galili
ENSPCIG00000002058	RC3H1	95	98.430	ENSNLEG00000015327	RC3H1	70	94.177	Nomascus_leucogenys
ENSPCIG00000002058	RC3H1	98	81.529	ENSOPRG00000013068	RC3H1	70	82.166	Ochotona_princeps
ENSPCIG00000002058	RC3H1	95	98.430	ENSODEG00000014185	RC3H1	70	93.300	Octodon_degus
ENSPCIG00000002058	RC3H1	95	98.206	ENSOANG00000000924	RC3H1	69	93.939	Ornithorhynchus_anatinus
ENSPCIG00000002058	RC3H1	95	98.430	ENSOCUG00000004930	RC3H1	70	93.418	Oryctolagus_cuniculus
ENSPCIG00000002058	RC3H1	98	84.217	ENSOGAG00000004044	RC3H1	72	82.353	Otolemur_garnettii
ENSPCIG00000002058	RC3H1	95	98.655	ENSOARG00000013011	RC3H1	69	94.051	Ovis_aries
ENSPCIG00000002058	RC3H1	95	98.430	ENSPPAG00000039253	RC3H1	70	94.177	Pan_paniscus
ENSPCIG00000002058	RC3H1	95	98.430	ENSPPRG00000009007	RC3H1	70	94.430	Panthera_pardus
ENSPCIG00000002058	RC3H1	95	98.430	ENSPTIG00000015326	RC3H1	70	93.711	Panthera_tigris_altaica
ENSPCIG00000002058	RC3H1	95	98.430	ENSPTRG00000001702	RC3H1	70	94.177	Pan_troglodytes
ENSPCIG00000002058	RC3H1	95	98.430	ENSPANG00000008886	RC3H1	70	94.430	Papio_anubis
ENSPCIG00000002058	RC3H1	95	97.982	ENSPSIG00000016181	RC3H1	70	90.704	Pelodiscus_sinensis
ENSPCIG00000002058	RC3H1	99	87.158	ENSPMGG00000015037	rc3h1b	97	87.158	Periophthalmus_magnuspinnatus
ENSPCIG00000002058	RC3H1	95	98.206	ENSPEMG00000011966	Rc3h1	70	92.649	Peromyscus_maniculatus_bairdii
ENSPCIG00000002058	RC3H1	54	87.549	ENSPMAG00000000074	rc3h1a	99	55.921	Petromyzon_marinus
ENSPCIG00000002058	RC3H1	95	98.430	ENSPPYG00000000490	RC3H1	75	94.304	Pongo_abelii
ENSPCIG00000002058	RC3H1	73	100.000	ENSPCAG00000010775	RC3H1	57	100.000	Procavia_capensis
ENSPCIG00000002058	RC3H1	74	91.400	ENSPCOG00000021795	RC3H1	61	92.243	Propithecus_coquereli
ENSPCIG00000002058	RC3H1	91	100.000	ENSPVAG00000007593	RC3H1	72	81.572	Pteropus_vampyrus
ENSPCIG00000002058	RC3H1	94	91.855	ENSPNAG00000017240	rc3h1b	94	91.874	Pygocentrus_nattereri
ENSPCIG00000002058	RC3H1	95	90.135	ENSPNAG00000023439	rc3h1a	96	90.562	Pygocentrus_nattereri
ENSPCIG00000002058	RC3H1	95	98.430	ENSRBIG00000037743	RC3H1	70	94.430	Rhinopithecus_bieti
ENSPCIG00000002058	RC3H1	95	98.430	ENSRROG00000036546	RC3H1	70	94.304	Rhinopithecus_roxellana
ENSPCIG00000002058	RC3H1	89	92.987	ENSSBOG00000010664	RC3H1	74	91.316	Saimiri_boliviensis_boliviensis
ENSPCIG00000002058	RC3H1	98	98.352	ENSSHAG00000007589	RC3H1	70	98.352	Sarcophilus_harrisii
ENSPCIG00000002058	RC3H1	94	85.360	ENSSARG00000004660	RC3H1	58	86.261	Sorex_araneus
ENSPCIG00000002058	RC3H1	99	86.141	ENSSPUG00000018472	RC3H1	69	85.445	Sphenodon_punctatus
ENSPCIG00000002058	RC3H1	95	98.430	ENSSSCG00000015498	RC3H1	75	93.009	Sus_scrofa
ENSPCIG00000002058	RC3H1	95	97.982	ENSTGUG00000004090	RC3H1	71	86.957	Taeniopygia_guttata
ENSPCIG00000002058	RC3H1	95	98.430	ENSTBEG00000005015	RC3H1	65	93.324	Tupaia_belangeri
ENSPCIG00000002058	RC3H1	95	98.206	ENSTTRG00000008572	RC3H1	70	94.051	Tursiops_truncatus
ENSPCIG00000002058	RC3H1	95	98.430	ENSUAMG00000019525	RC3H1	70	93.418	Ursus_americanus
ENSPCIG00000002058	RC3H1	95	98.430	ENSUMAG00000020087	RC3H1	70	93.924	Ursus_maritimus
ENSPCIG00000002058	RC3H1	94	97.511	ENSVPAG00000002591	RC3H1	64	98.198	Vicugna_pacos
ENSPCIG00000002058	RC3H1	95	98.864	ENSVVUG00000014201	RC3H1	94	96.903	Vulpes_vulpes
ENSPCIG00000002058	RC3H1	95	96.222	ENSXETG00000020030	rc3h1	73	82.310	Xenopus_tropicalis