EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000002276 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 9496 bases
Position: chrFUWB01000195.1:1165865-1175360
Accession: 110204900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000002772	MBD	PF01429.19	2.9e-18	1	1
ENSPCIP00000002767	MBD	PF01429.19	3.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000003466	-	1691	-	ENSPCIP00000002772	472 (aa)	-	-
ENSPCIT00000003460	-	1841	XM_020981104	ENSPCIP00000002767	522 (aa)	XP_020836763	-

Gene Model

Click here to download ENSPCIG00000002276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000002276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000002276	-	100	57.749	ENSG00000129071	MBD4	69	92.222	Homo_sapiens
ENSPCIG00000002276	-	98	58.960	ENSAMEG00000004562	MBD4	89	58.960	Ailuropoda_melanoleuca
ENSPCIG00000002276	-	98	56.395	ENSBTAG00000021645	MBD4	90	56.395	Bos_taurus
ENSPCIG00000002276	-	98	58.189	ENSCJAG00000017293	MBD4	89	58.574	Callithrix_jacchus
ENSPCIG00000002276	-	98	58.027	ENSCAFG00000004867	MBD4	89	58.027	Canis_familiaris
ENSPCIG00000002276	-	98	58.027	ENSCAFG00020007082	MBD4	89	58.027	Canis_lupus_dingo
ENSPCIG00000002276	-	98	56.840	ENSCHIG00000009760	MBD4	90	56.840	Capra_hircus
ENSPCIG00000002276	-	100	56.192	ENSCCAG00000029796	MBD4	92	56.562	Cebus_capucinus
ENSPCIG00000002276	-	98	58.015	ENSCATG00000035211	MBD4	89	58.397	Cercocebus_atys
ENSPCIG00000002276	-	98	57.500	ENSCLAG00000008974	MBD4	91	57.500	Chinchilla_lanigera
ENSPCIG00000002276	-	98	58.206	ENSCSAG00000009037	MBD4	89	58.588	Chlorocebus_sabaeus
ENSPCIG00000002276	-	99	49.457	ENSCPBG00000014704	MBD4	95	49.457	Chrysemys_picta_bellii
ENSPCIG00000002276	-	98	58.015	ENSCANG00000007120	MBD4	89	58.397	Colobus_angolensis_palliatus
ENSPCIG00000002276	-	98	52.952	ENSCGRG00001003507	Mbd4	90	53.232	Cricetulus_griseus_chok1gshd
ENSPCIG00000002276	-	98	52.952	ENSCGRG00000010974	Mbd4	90	53.232	Cricetulus_griseus_crigri
ENSPCIG00000002276	-	99	57.765	ENSDNOG00000049619	MBD4	91	57.765	Dasypus_novemcinctus
ENSPCIG00000002276	-	85	47.884	ENSDORG00000000902	-	92	47.884	Dipodomys_ordii
ENSPCIG00000002276	-	98	57.722	ENSEASG00005014800	MBD4	90	57.722	Equus_asinus_asinus
ENSPCIG00000002276	-	98	57.336	ENSECAG00000022106	MBD4	90	57.336	Equus_caballus
ENSPCIG00000002276	-	93	54.767	ENSEEUG00000011459	MBD4	90	54.767	Erinaceus_europaeus
ENSPCIG00000002276	-	98	58.527	ENSFCAG00000000083	MBD4	89	58.527	Felis_catus
ENSPCIG00000002276	-	89	43.333	ENSFALG00000013663	MBD4	99	43.536	Ficedula_albicollis
ENSPCIG00000002276	-	99	49.548	ENSGAGG00000018644	MBD4	95	49.548	Gopherus_agassizii
ENSPCIG00000002276	-	100	57.196	ENSGGOG00000010698	MBD4	92	57.565	Gorilla_gorilla
ENSPCIG00000002276	-	100	55.660	ENSHGLG00000009034	MBD4	93	55.660	Heterocephalus_glaber_female
ENSPCIG00000002276	-	100	55.849	ENSHGLG00100000135	MBD4	93	55.849	Heterocephalus_glaber_male
ENSPCIG00000002276	-	98	56.371	ENSSTOG00000020663	MBD4	89	56.371	Ictidomys_tridecemlineatus
ENSPCIG00000002276	-	97	57.611	ENSLAFG00000010609	MBD4	89	57.611	Loxodonta_africana
ENSPCIG00000002276	-	98	58.004	ENSMFAG00000002266	MBD4	89	58.004	Macaca_fascicularis
ENSPCIG00000002276	-	98	57.786	ENSMMUG00000012723	MBD4	89	57.786	Macaca_mulatta
ENSPCIG00000002276	-	93	55.621	ENSMNEG00000029752	MBD4	89	56.016	Macaca_nemestrina
ENSPCIG00000002276	-	98	58.015	ENSMLEG00000024859	MBD4	89	58.397	Mandrillus_leucophaeus
ENSPCIG00000002276	-	98	57.692	ENSMICG00000008022	MBD4	89	57.692	Microcebus_murinus
ENSPCIG00000002276	-	69	33.735	ENSMOCG00000002466	-	82	33.837	Microtus_ochrogaster
ENSPCIG00000002276	-	95	79.757	ENSMODG00000006399	-	100	79.757	Monodelphis_domestica
ENSPCIG00000002276	-	98	53.612	MGP_CAROLIEiJ_G0028760	Mbd4	90	53.612	Mus_caroli
ENSPCIG00000002276	-	98	53.232	ENSMUSG00000030322	Mbd4	91	53.232	Mus_musculus
ENSPCIG00000002276	-	98	53.396	MGP_PahariEiJ_G0022511	-	90	53.396	Mus_pahari
ENSPCIG00000002276	-	98	53.700	MGP_SPRETEiJ_G0029788	Mbd4	91	53.700	Mus_spretus
ENSPCIG00000002276	-	100	57.196	ENSMPUG00000017195	MBD4	92	57.196	Mustela_putorius_furo
ENSPCIG00000002276	-	98	59.846	ENSMLUG00000014766	MBD4	94	59.846	Myotis_lucifugus
ENSPCIG00000002276	-	100	57.328	ENSNLEG00000005337	MBD4	92	57.699	Nomascus_leucogenys
ENSPCIG00000002276	-	57	100.000	ENSMEUG00000015599	-	71	100.000	Notamacropus_eugenii
ENSPCIG00000002276	-	98	54.335	ENSOPRG00000000473	MBD4	89	54.335	Ochotona_princeps
ENSPCIG00000002276	-	87	44.111	ENSOANG00000004589	-	96	44.368	Ornithorhynchus_anatinus
ENSPCIG00000002276	-	98	53.831	ENSOCUG00000013006	MBD4	89	53.831	Oryctolagus_cuniculus
ENSPCIG00000002276	-	98	57.915	ENSOGAG00000010236	MBD4	90	57.915	Otolemur_garnettii
ENSPCIG00000002276	-	98	57.225	ENSOARG00000014699	MBD4	90	57.225	Ovis_aries
ENSPCIG00000002276	-	100	57.380	ENSPPAG00000036528	MBD4	92	57.749	Pan_paniscus
ENSPCIG00000002276	-	98	57.752	ENSPPRG00000016480	MBD4	89	57.752	Panthera_pardus
ENSPCIG00000002276	-	100	57.749	ENSPTRG00000015377	MBD4	92	58.118	Pan_troglodytes
ENSPCIG00000002276	-	98	58.969	ENSPANG00000015047	MBD4	89	59.351	Papio_anubis
ENSPCIG00000002276	-	94	50.760	ENSPSIG00000007892	MBD4	88	50.760	Pelodiscus_sinensis
ENSPCIG00000002276	-	92	48.479	ENSPEMG00000006226	Mbd4	90	49.393	Peromyscus_maniculatus_bairdii
ENSPCIG00000002276	-	75	50.820	ENSPFOG00000014471	mbd4	90	50.820	Poecilia_formosa
ENSPCIG00000002276	-	100	56.667	ENSPPYG00000013417	MBD4	92	57.037	Pongo_abelii
ENSPCIG00000002276	-	93	54.949	ENSPCAG00000012915	MBD4	89	55.556	Procavia_capensis
ENSPCIG00000002276	-	98	57.685	ENSPVAG00000005238	MBD4	89	57.685	Pteropus_vampyrus
ENSPCIG00000002276	-	57	72.515	ENSPNAG00000000509	mbd4	67	72.515	Pygocentrus_nattereri
ENSPCIG00000002276	-	98	55.133	ENSRNOG00000010919	Mbd4	90	55.133	Rattus_norvegicus
ENSPCIG00000002276	-	98	57.824	ENSRBIG00000027722	MBD4	89	58.206	Rhinopithecus_bieti
ENSPCIG00000002276	-	98	57.634	ENSRROG00000029136	MBD4	89	58.015	Rhinopithecus_roxellana
ENSPCIG00000002276	-	98	58.382	ENSSBOG00000016810	MBD4	89	58.382	Saimiri_boliviensis_boliviensis
ENSPCIG00000002276	-	100	82.955	ENSSHAG00000012953	MBD4	93	82.955	Sarcophilus_harrisii
ENSPCIG00000002276	-	88	49.893	ENSSARG00000004496	-	80	49.893	Sorex_araneus
ENSPCIG00000002276	-	98	49.071	ENSSPUG00000017344	MBD4	96	49.071	Sphenodon_punctatus
ENSPCIG00000002276	-	98	59.615	ENSSSCG00000033303	MBD4	90	59.615	Sus_scrofa
ENSPCIG00000002276	-	75	96.000	ENSTBEG00000003041	-	61	96.000	Tupaia_belangeri
ENSPCIG00000002276	-	98	58.654	ENSTTRG00000011265	MBD4	92	58.654	Tursiops_truncatus
ENSPCIG00000002276	-	95	58.964	ENSUAMG00000000814	MBD4	100	58.964	Ursus_americanus
ENSPCIG00000002276	-	98	58.140	ENSUMAG00000017542	MBD4	90	58.140	Ursus_maritimus
ENSPCIG00000002276	-	58	61.006	ENSVPAG00000004040	-	55	61.006	Vicugna_pacos
ENSPCIG00000002276	-	98	58.027	ENSVVUG00000014222	MBD4	89	58.027	Vulpes_vulpes
ENSPCIG00000002276	-	52	68.571	ENSXETG00000026622	mbd4	58	68.571	Xenopus_tropicalis