EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000002443 (Gene tree)
Gene ID: 110206859
Gene Symbol: SWT1
Alias: -
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 125507 bases
Position: chrFUWB01002160.1:231111-356617
Accession: 16785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000002988	PIN_4	PF13638.6	1.3e-27	1	1
ENSPCIP00000002973	PIN_4	PF13638.6	1.4e-27	1	1
ENSPCIP00000003046	PIN_4	PF13638.6	2.4e-22	1	1
ENSPCIP00000003010	PIN_4	PF13638.6	3.5e-22	1	1
ENSPCIP00000003031	PIN_4	PF13638.6	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000003702	SWT1-201	2928	-	ENSPCIP00000002973	972 (aa)	-	-
ENSPCIT00000003783	SWT1-205	1881	-	ENSPCIP00000003046	623 (aa)	-	-
ENSPCIT00000003767	SWT1-204	2739	-	ENSPCIP00000003031	909 (aa)	-	-
ENSPCIT00000003719	SWT1-202	2835	-	ENSPCIP00000002988	941 (aa)	-	-
ENSPCIT00000003743	SWT1-203	2817	-	ENSPCIP00000003010	935 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000002443's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000002443's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000002443	SWT1	99	73.077	ENSG00000116668	SWT1	99	58.980	Homo_sapiens
ENSPCIG00000002443	SWT1	60	32.833	ENSAPOG00000014897	-	58	33.167	Acanthochromis_polyacanthus
ENSPCIG00000002443	SWT1	99	71.756	ENSAMEG00000013585	SWT1	100	59.554	Ailuropoda_melanoleuca
ENSPCIG00000002443	SWT1	60	32.101	ENSAOCG00000013932	swt1	58	32.998	Amphiprion_ocellaris
ENSPCIG00000002443	SWT1	60	32.101	ENSAPEG00000009613	-	58	32.437	Amphiprion_percula
ENSPCIG00000002443	SWT1	60	34.739	ENSATEG00000018946	swt1	57	34.739	Anabas_testudineus
ENSPCIG00000002443	SWT1	71	49.555	ENSAPLG00000008607	SWT1	99	47.013	Anas_platyrhynchos
ENSPCIG00000002443	SWT1	72	43.088	ENSACAG00000002276	SWT1	58	55.952	Anolis_carolinensis
ENSPCIG00000002443	SWT1	99	75.385	ENSANAG00000027068	SWT1	99	59.511	Aotus_nancymaae
ENSPCIG00000002443	SWT1	65	36.967	ENSAMXG00000010971	swt1	60	36.967	Astyanax_mexicanus
ENSPCIG00000002443	SWT1	79	56.627	ENSBTAG00000004492	SWT1	99	56.672	Bos_taurus
ENSPCIG00000002443	SWT1	99	74.046	ENSCJAG00000005544	SWT1	100	58.174	Callithrix_jacchus
ENSPCIG00000002443	SWT1	99	72.519	ENSCAFG00000013543	SWT1	100	59.358	Canis_familiaris
ENSPCIG00000002443	SWT1	99	72.519	ENSCAFG00020015648	SWT1	99	61.155	Canis_lupus_dingo
ENSPCIG00000002443	SWT1	92	75.573	ENSCHIG00000023511	SWT1	85	93.548	Capra_hircus
ENSPCIG00000002443	SWT1	99	71.756	ENSTSYG00000010470	SWT1	100	60.212	Carlito_syrichta
ENSPCIG00000002443	SWT1	90	72.059	ENSCPOG00000014251	SWT1	100	58.303	Cavia_porcellus
ENSPCIG00000002443	SWT1	99	74.615	ENSCCAG00000033926	SWT1	99	59.405	Cebus_capucinus
ENSPCIG00000002443	SWT1	99	74.615	ENSCATG00000042210	SWT1	99	70.608	Cercocebus_atys
ENSPCIG00000002443	SWT1	98	70.492	ENSCLAG00000013959	SWT1	99	57.417	Chinchilla_lanigera
ENSPCIG00000002443	SWT1	99	74.615	ENSCSAG00000012895	SWT1	99	59.958	Chlorocebus_sabaeus
ENSPCIG00000002443	SWT1	60	78.750	ENSCHOG00000002211	-	63	78.750	Choloepus_hoffmanni
ENSPCIG00000002443	SWT1	89	76.471	ENSCPBG00000015691	SWT1	93	76.471	Chrysemys_picta_bellii
ENSPCIG00000002443	SWT1	99	73.846	ENSCANG00000032207	SWT1	99	70.462	Colobus_angolensis_palliatus
ENSPCIG00000002443	SWT1	99	75.573	ENSCGRG00001022955	Swt1	100	56.915	Cricetulus_griseus_chok1gshd
ENSPCIG00000002443	SWT1	99	75.573	ENSCGRG00000010224	Swt1	100	57.766	Cricetulus_griseus_crigri
ENSPCIG00000002443	SWT1	61	33.662	ENSCSEG00000017352	swt1	75	33.498	Cynoglossus_semilaevis
ENSPCIG00000002443	SWT1	62	37.458	ENSDARG00000094010	swt1	57	37.458	Danio_rerio
ENSPCIG00000002443	SWT1	86	61.364	ENSDNOG00000005254	SWT1	100	56.824	Dasypus_novemcinctus
ENSPCIG00000002443	SWT1	88	72.519	ENSDORG00000010531	Swt1	95	60.501	Dipodomys_ordii
ENSPCIG00000002443	SWT1	86	80.460	ENSEASG00005005530	SWT1	98	58.545	Equus_asinus_asinus
ENSPCIG00000002443	SWT1	93	77.099	ENSECAG00000012085	SWT1	99	60.046	Equus_caballus
ENSPCIG00000002443	SWT1	85	73.563	ENSEEUG00000003664	SWT1	88	73.563	Erinaceus_europaeus
ENSPCIG00000002443	SWT1	61	37.037	ENSELUG00000020565	swt1	56	37.037	Esox_lucius
ENSPCIG00000002443	SWT1	99	74.046	ENSFCAG00000011286	SWT1	100	60.999	Felis_catus
ENSPCIG00000002443	SWT1	96	40.273	ENSFALG00000003206	SWT1	98	40.799	Ficedula_albicollis
ENSPCIG00000002443	SWT1	99	69.466	ENSFDAG00000007569	SWT1	100	57.733	Fukomys_damarensis
ENSPCIG00000002443	SWT1	95	57.500	ENSGALG00000034230	SWT1	96	43.908	Gallus_gallus
ENSPCIG00000002443	SWT1	60	32.328	ENSGAFG00000007803	-	58	32.328	Gambusia_affinis
ENSPCIG00000002443	SWT1	87	56.000	ENSGAGG00000025050	SWT1	97	56.014	Gopherus_agassizii
ENSPCIG00000002443	SWT1	56	75.758	ENSGGOG00000041167	-	95	69.573	Gorilla_gorilla
ENSPCIG00000002443	SWT1	72	30.556	ENSHBUG00000006188	swt1	80	30.556	Haplochromis_burtoni
ENSPCIG00000002443	SWT1	98	73.554	ENSHGLG00000006542	SWT1	99	58.030	Heterocephalus_glaber_female
ENSPCIG00000002443	SWT1	98	73.554	ENSHGLG00100014408	SWT1	99	59.208	Heterocephalus_glaber_male
ENSPCIG00000002443	SWT1	62	34.660	ENSIPUG00000009113	-	58	34.826	Ictalurus_punctatus
ENSPCIG00000002443	SWT1	99	76.336	ENSSTOG00000010356	SWT1	100	59.979	Ictidomys_tridecemlineatus
ENSPCIG00000002443	SWT1	99	70.992	ENSJJAG00000015927	Swt1	100	55.059	Jaculus_jaculus
ENSPCIG00000002443	SWT1	61	33.609	ENSKMAG00000012533	swt1	58	33.609	Kryptolebias_marmoratus
ENSPCIG00000002443	SWT1	60	34.010	ENSLBEG00000020663	-	57	34.010	Labrus_bergylta
ENSPCIG00000002443	SWT1	81	42.243	ENSLACG00000009194	SWT1	99	44.384	Latimeria_chalumnae
ENSPCIG00000002443	SWT1	60	42.609	ENSLOCG00000001749	swt1	97	41.848	Lepisosteus_oculatus
ENSPCIG00000002443	SWT1	65	72.204	ENSLAFG00000004346	-	100	72.204	Loxodonta_africana
ENSPCIG00000002443	SWT1	99	73.077	ENSMFAG00000031793	SWT1	99	70.248	Macaca_fascicularis
ENSPCIG00000002443	SWT1	99	73.077	ENSMMUG00000013882	SWT1	99	67.442	Macaca_mulatta
ENSPCIG00000002443	SWT1	99	73.077	ENSMNEG00000035502	SWT1	99	70.248	Macaca_nemestrina
ENSPCIG00000002443	SWT1	99	74.615	ENSMLEG00000038692	SWT1	99	70.608	Mandrillus_leucophaeus
ENSPCIG00000002443	SWT1	61	54.762	ENSMGAG00000000973	SWT1	96	52.381	Meleagris_gallopavo
ENSPCIG00000002443	SWT1	92	77.273	ENSMAUG00000007996	Swt1	97	77.273	Mesocricetus_auratus
ENSPCIG00000002443	SWT1	99	75.573	ENSMICG00000014975	SWT1	100	60.957	Microcebus_murinus
ENSPCIG00000002443	SWT1	99	74.046	ENSMOCG00000009776	Swt1	98	55.945	Microtus_ochrogaster
ENSPCIG00000002443	SWT1	100	87.500	ENSMODG00000007472	SWT1	100	81.644	Monodelphis_domestica
ENSPCIG00000002443	SWT1	61	35.473	ENSMALG00000019308	swt1	58	35.473	Monopterus_albus
ENSPCIG00000002443	SWT1	99	73.846	MGP_CAROLIEiJ_G0014692	Swt1	99	56.489	Mus_caroli
ENSPCIG00000002443	SWT1	99	73.846	ENSMUSG00000052748	Swt1	98	55.638	Mus_musculus
ENSPCIG00000002443	SWT1	99	76.336	MGP_PahariEiJ_G0027928	Swt1	85	70.492	Mus_pahari
ENSPCIG00000002443	SWT1	99	73.846	MGP_SPRETEiJ_G0015499	Swt1	98	56.064	Mus_spretus
ENSPCIG00000002443	SWT1	99	68.702	ENSMPUG00000011913	SWT1	100	59.894	Mustela_putorius_furo
ENSPCIG00000002443	SWT1	99	74.046	ENSMLUG00000001142	SWT1	97	57.833	Myotis_lucifugus
ENSPCIG00000002443	SWT1	99	77.099	ENSNGAG00000021080	Swt1	98	58.573	Nannospalax_galili
ENSPCIG00000002443	SWT1	99	73.077	ENSNLEG00000018031	SWT1	99	58.980	Nomascus_leucogenys
ENSPCIG00000002443	SWT1	100	91.912	ENSMEUG00000000236	-	71	91.912	Notamacropus_eugenii
ENSPCIG00000002443	SWT1	81	84.848	ENSOPRG00000000692	SWT1	87	55.046	Ochotona_princeps
ENSPCIG00000002443	SWT1	72	31.831	ENSONIG00000009994	swt1	100	34.974	Oreochromis_niloticus
ENSPCIG00000002443	SWT1	85	66.412	ENSOANG00000001013	-	100	57.405	Ornithorhynchus_anatinus
ENSPCIG00000002443	SWT1	99	66.923	ENSOCUG00000004901	SWT1	99	54.603	Oryctolagus_cuniculus
ENSPCIG00000002443	SWT1	65	32.615	ENSORLG00000009682	swt1	64	32.615	Oryzias_latipes
ENSPCIG00000002443	SWT1	65	33.026	ENSORLG00020011654	swt1	62	33.603	Oryzias_latipes_hni
ENSPCIG00000002443	SWT1	60	34.053	ENSORLG00015007734	swt1	59	34.053	Oryzias_latipes_hsok
ENSPCIG00000002443	SWT1	61	34.110	ENSOMEG00000006607	swt1	58	34.110	Oryzias_melastigma
ENSPCIG00000002443	SWT1	99	73.282	ENSOGAG00000016195	SWT1	100	59.299	Otolemur_garnettii
ENSPCIG00000002443	SWT1	99	76.336	ENSOARG00000004156	SWT1	98	59.574	Ovis_aries
ENSPCIG00000002443	SWT1	99	73.077	ENSPPAG00000021400	SWT1	99	58.874	Pan_paniscus
ENSPCIG00000002443	SWT1	99	74.809	ENSPPRG00000023754	SWT1	100	61.318	Panthera_pardus
ENSPCIG00000002443	SWT1	99	74.046	ENSPTIG00000021889	SWT1	100	61.211	Panthera_tigris_altaica
ENSPCIG00000002443	SWT1	99	73.077	ENSPTRG00000001777	SWT1	99	58.874	Pan_troglodytes
ENSPCIG00000002443	SWT1	99	73.846	ENSPANG00000005099	SWT1	99	69.951	Papio_anubis
ENSPCIG00000002443	SWT1	70	33.632	ENSPKIG00000005979	swt1	63	34.671	Paramormyrops_kingsleyae
ENSPCIG00000002443	SWT1	96	63.710	ENSPSIG00000008961	SWT1	99	46.302	Pelodiscus_sinensis
ENSPCIG00000002443	SWT1	99	76.336	ENSPEMG00000008208	Swt1	98	57.264	Peromyscus_maniculatus_bairdii
ENSPCIG00000002443	SWT1	71	30.404	ENSPFOG00000010988	-	71	31.397	Poecilia_formosa
ENSPCIG00000002443	SWT1	62	32.520	ENSPLAG00000022908	-	60	32.520	Poecilia_latipinna
ENSPCIG00000002443	SWT1	62	32.358	ENSPMEG00000006943	-	60	32.358	Poecilia_mexicana
ENSPCIG00000002443	SWT1	99	73.077	ENSPPYG00000000415	SWT1	99	58.448	Pongo_abelii
ENSPCIG00000002443	SWT1	99	66.667	ENSPCAG00000008337	SWT1	93	66.667	Procavia_capensis
ENSPCIG00000002443	SWT1	74	81.319	ENSPCOG00000018195	-	97	81.319	Propithecus_coquereli
ENSPCIG00000002443	SWT1	73	75.000	ENSPVAG00000005968	SWT1	80	60.875	Pteropus_vampyrus
ENSPCIG00000002443	SWT1	72	30.404	ENSPNYG00000012934	swt1	71	32.390	Pundamilia_nyererei
ENSPCIG00000002443	SWT1	75	34.903	ENSPNAG00000017795	swt1	61	35.726	Pygocentrus_nattereri
ENSPCIG00000002443	SWT1	99	73.282	ENSRNOG00000032258	Swt1	98	57.537	Rattus_norvegicus
ENSPCIG00000002443	SWT1	99	73.077	ENSRBIG00000040630	SWT1	99	68.264	Rhinopithecus_bieti
ENSPCIG00000002443	SWT1	75	56.540	ENSRROG00000028596	SWT1	100	57.975	Rhinopithecus_roxellana
ENSPCIG00000002443	SWT1	99	73.846	ENSSBOG00000028825	SWT1	99	59.279	Saimiri_boliviensis_boliviensis
ENSPCIG00000002443	SWT1	100	93.182	ENSSHAG00000009241	SWT1	100	83.778	Sarcophilus_harrisii
ENSPCIG00000002443	SWT1	62	39.761	ENSSFOG00015004895	swt1	57	39.761	Scleropages_formosus
ENSPCIG00000002443	SWT1	60	32.888	ENSSDUG00000012345	swt1	58	33.055	Seriola_dumerili
ENSPCIG00000002443	SWT1	56	33.451	ENSSLDG00000003821	swt1	56	33.627	Seriola_lalandi_dorsalis
ENSPCIG00000002443	SWT1	91	64.286	ENSSPUG00000003899	SWT1	93	45.279	Sphenodon_punctatus
ENSPCIG00000002443	SWT1	64	31.424	ENSSPAG00000001030	swt1	62	31.692	Stegastes_partitus
ENSPCIG00000002443	SWT1	96	75.573	ENSSSCG00000015569	SWT1	100	61.489	Sus_scrofa
ENSPCIG00000002443	SWT1	60	55.844	ENSTGUG00000003718	-	100	53.633	Taeniopygia_guttata
ENSPCIG00000002443	SWT1	61	33.390	ENSTRUG00000006420	swt1	61	33.390	Takifugu_rubripes
ENSPCIG00000002443	SWT1	71	87.097	ENSTBEG00000016891	-	54	87.097	Tupaia_belangeri
ENSPCIG00000002443	SWT1	99	75.573	ENSTTRG00000005914	SWT1	100	59.086	Tursiops_truncatus
ENSPCIG00000002443	SWT1	99	70.803	ENSUAMG00000020937	SWT1	99	61.574	Ursus_americanus
ENSPCIG00000002443	SWT1	99	70.803	ENSUMAG00000021918	SWT1	100	60.212	Ursus_maritimus
ENSPCIG00000002443	SWT1	88	90.909	ENSVPAG00000011855	SWT1	92	68.623	Vicugna_pacos
ENSPCIG00000002443	SWT1	99	72.519	ENSVVUG00000009182	SWT1	100	60.529	Vulpes_vulpes
ENSPCIG00000002443	SWT1	60	32.554	ENSXMAG00000023472	-	59	31.796	Xiphophorus_maculatus