EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000002491 (Gene tree)
Gene ID: 110223758
Gene Symbol: R3HDM1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 179452 bases
Position: chrFUWB01000366.1:1197952-1377403
Accession: 110223758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000003122	R3H	PF01424.22	2.2e-11	1	1
ENSPCIP00000003087	R3H	PF01424.22	2.4e-11	1	1
ENSPCIP00000003107	R3H	PF01424.22	2.4e-11	1	1
ENSPCIP00000003071	R3H	PF01424.22	2.5e-11	1	1
ENSPCIP00000003051	R3H	PF01424.22	2.5e-11	1	1
ENSPCIP00000003140	R3H	PF01424.22	2.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000003788	R3HDM1-201	4513	XM_021009437	ENSPCIP00000003051	1130 (aa)	XP_020865096	UPI000A288041
ENSPCIT00000003856	R3HDM1-204	4378	XM_021009447	ENSPCIP00000003107	1085 (aa)	XP_020865106	UPI000A286502
ENSPCIT00000003876	R3HDM1-205	4258	XM_021009449	ENSPCIP00000003122	1045 (aa)	XP_020865108	UPI000A2893B9
ENSPCIT00000003895	R3HDM1-206	4582	XM_021009438	ENSPCIP00000003140	1130 (aa)	XP_020865097	UPI000A288041
ENSPCIT00000003831	R3HDM1-203	4411	XM_021009442	ENSPCIP00000003087	1096 (aa)	XP_020865101	UPI000A28BD75
ENSPCIT00000003813	R3HDM1-202	4471	XM_021009441	ENSPCIP00000003071	1116 (aa)	XP_020865100	UPI000A285411

Gene Model

Click here to download ENSPCIG00000002491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000002491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000002491	R3HDM1	68	53.059	ENSPCIG00000010648	ARPP21	94	51.820
ENSPCIG00000002491	R3HDM1	99	48.366	ENSPCIG00000023841	R3HDM2	100	49.580

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000002491	R3HDM1	100	84.324	ENSG00000048991	R3HDM1	100	90.659	Homo_sapiens
ENSPCIG00000002491	R3HDM1	89	60.613	ENSAPOG00000020850	r3hdm1	92	60.570	Acanthochromis_polyacanthus
ENSPCIG00000002491	R3HDM1	100	85.045	ENSAMEG00000014886	R3HDM1	100	85.135	Ailuropoda_melanoleuca
ENSPCIG00000002491	R3HDM1	88	60.570	ENSAOCG00000005192	r3hdm1	95	60.333	Amphiprion_ocellaris
ENSPCIG00000002491	R3HDM1	88	55.107	ENSAPEG00000016108	r3hdm1	95	55.107	Amphiprion_percula
ENSPCIG00000002491	R3HDM1	88	55.238	ENSATEG00000000232	r3hdm1	99	47.394	Anabas_testudineus
ENSPCIG00000002491	R3HDM1	100	82.337	ENSAPLG00000015231	R3HDM1	100	82.337	Anas_platyrhynchos
ENSPCIG00000002491	R3HDM1	100	85.049	ENSACAG00000001676	R3HDM1	100	81.754	Anolis_carolinensis
ENSPCIG00000002491	R3HDM1	100	84.248	ENSANAG00000035334	R3HDM1	100	89.835	Aotus_nancymaae
ENSPCIG00000002491	R3HDM1	88	46.206	ENSACLG00000027282	r3hdm1	89	66.987	Astatotilapia_calliptera
ENSPCIG00000002491	R3HDM1	100	71.531	ENSAMXG00000012861	R3HDM1	100	71.599	Astyanax_mexicanus
ENSPCIG00000002491	R3HDM1	88	71.779	ENSAMXG00000003536	r3hdm1	92	71.758	Astyanax_mexicanus
ENSPCIG00000002491	R3HDM1	54	58.537	ENSAMXG00000020587	arpp21	88	39.281	Astyanax_mexicanus
ENSPCIG00000002491	R3HDM1	100	89.706	ENSBTAG00000013302	R3HDM1	100	84.548	Bos_taurus
ENSPCIG00000002491	R3HDM1	100	84.220	ENSCJAG00000011718	R3HDM1	100	89.835	Callithrix_jacchus
ENSPCIG00000002491	R3HDM1	100	85.315	ENSCAFG00000005075	R3HDM1	100	85.405	Canis_familiaris
ENSPCIG00000002491	R3HDM1	100	91.176	ENSCAFG00020016119	R3HDM1	99	89.074	Canis_lupus_dingo
ENSPCIG00000002491	R3HDM1	100	89.706	ENSCHIG00000020851	R3HDM1	100	84.609	Capra_hircus
ENSPCIG00000002491	R3HDM1	100	87.715	ENSCPOG00000012784	R3HDM1	100	87.153	Cavia_porcellus
ENSPCIG00000002491	R3HDM1	100	83.694	ENSCCAG00000027199	R3HDM1	100	89.011	Cebus_capucinus
ENSPCIG00000002491	R3HDM1	100	89.706	ENSCATG00000023642	R3HDM1	100	90.110	Cercocebus_atys
ENSPCIG00000002491	R3HDM1	100	89.216	ENSCLAG00000007962	R3HDM1	100	89.273	Chinchilla_lanigera
ENSPCIG00000002491	R3HDM1	100	89.951	ENSCSAG00000016356	R3HDM1	100	84.003	Chlorocebus_sabaeus
ENSPCIG00000002491	R3HDM1	82	85.496	ENSCHOG00000013638	R3HDM1	91	94.118	Choloepus_hoffmanni
ENSPCIG00000002491	R3HDM1	95	80.833	ENSCPBG00000009645	R3HDM1	100	92.279	Chrysemys_picta_bellii
ENSPCIG00000002491	R3HDM1	100	83.888	ENSCANG00000034748	R3HDM1	100	90.385	Colobus_angolensis_palliatus
ENSPCIG00000002491	R3HDM1	99	88.725	ENSCGRG00001012357	R3hdm1	97	82.033	Cricetulus_griseus_chok1gshd
ENSPCIG00000002491	R3HDM1	100	88.725	ENSCGRG00000012080	R3hdm1	100	89.619	Cricetulus_griseus_crigri
ENSPCIG00000002491	R3HDM1	82	63.037	ENSCSEG00000008944	r3hdm1	85	65.246	Cynoglossus_semilaevis
ENSPCIG00000002491	R3HDM1	88	59.620	ENSCVAG00000007582	r3hdm1	88	63.609	Cyprinodon_variegatus
ENSPCIG00000002491	R3HDM1	65	37.302	ENSDARG00000061081	arpp21	88	36.758	Danio_rerio
ENSPCIG00000002491	R3HDM1	100	81.425	ENSDNOG00000000771	R3HDM1	100	81.515	Dasypus_novemcinctus
ENSPCIG00000002491	R3HDM1	92	86.308	ENSETEG00000013606	R3HDM1	90	86.829	Echinops_telfairi
ENSPCIG00000002491	R3HDM1	66	41.743	ENSEBUG00000014746	arpp21	99	41.851	Eptatretus_burgeri
ENSPCIG00000002491	R3HDM1	100	90.931	ENSEASG00005007392	R3HDM1	100	86.228	Equus_asinus_asinus
ENSPCIG00000002491	R3HDM1	100	90.931	ENSECAG00000019114	R3HDM1	100	86.011	Equus_caballus
ENSPCIG00000002491	R3HDM1	87	80.147	ENSEEUG00000012589	R3HDM1	84	81.081	Erinaceus_europaeus
ENSPCIG00000002491	R3HDM1	93	53.054	ENSELUG00000014413	r3hdm1	100	52.665	Esox_lucius
ENSPCIG00000002491	R3HDM1	88	66.509	ENSELUG00000004909	R3HDM1	99	56.374	Esox_lucius
ENSPCIG00000002491	R3HDM1	100	91.176	ENSFCAG00000027113	R3HDM1	100	85.439	Felis_catus
ENSPCIG00000002491	R3HDM1	75	78.286	ENSFALG00000013731	R3HDM1	93	72.809	Ficedula_albicollis
ENSPCIG00000002491	R3HDM1	100	88.971	ENSFDAG00000016478	R3HDM1	100	89.273	Fukomys_damarensis
ENSPCIG00000002491	R3HDM1	88	60.808	ENSFHEG00000018713	r3hdm1	87	64.809	Fundulus_heteroclitus
ENSPCIG00000002491	R3HDM1	64	65.440	ENSGMOG00000006042	-	74	69.330	Gadus_morhua
ENSPCIG00000002491	R3HDM1	100	73.213	ENSGALG00000012246	R3HDM1	99	84.641	Gallus_gallus
ENSPCIG00000002491	R3HDM1	88	46.101	ENSGAFG00000006203	r3hdm1	90	68.932	Gambusia_affinis
ENSPCIG00000002491	R3HDM1	88	49.569	ENSGACG00000014925	r3hdm1	99	48.769	Gasterosteus_aculeatus
ENSPCIG00000002491	R3HDM1	100	82.439	ENSGAGG00000007840	R3HDM1	100	82.203	Gopherus_agassizii
ENSPCIG00000002491	R3HDM1	100	84.324	ENSGGOG00000008156	R3HDM1	100	90.659	Gorilla_gorilla
ENSPCIG00000002491	R3HDM1	100	88.480	ENSHGLG00000015718	R3HDM1	100	88.581	Heterocephalus_glaber_female
ENSPCIG00000002491	R3HDM1	100	88.480	ENSHGLG00100003184	-	100	88.581	Heterocephalus_glaber_male
ENSPCIG00000002491	R3HDM1	100	62.888	ENSHGLG00100015374	-	100	62.980	Heterocephalus_glaber_male
ENSPCIG00000002491	R3HDM1	78	64.935	ENSHCOG00000013366	r3hdm1	85	65.909	Hippocampus_comes
ENSPCIG00000002491	R3HDM1	51	50.213	ENSIPUG00000020552	arpp21	91	40.217	Ictalurus_punctatus
ENSPCIG00000002491	R3HDM1	93	62.274	ENSIPUG00000013629	r3hdm1	94	70.701	Ictalurus_punctatus
ENSPCIG00000002491	R3HDM1	81	72.093	ENSIPUG00000001676	R3HDM1	99	60.883	Ictalurus_punctatus
ENSPCIG00000002491	R3HDM1	100	89.951	ENSSTOG00000007572	R3HDM1	100	90.311	Ictidomys_tridecemlineatus
ENSPCIG00000002491	R3HDM1	95	76.296	ENSLACG00000005334	R3HDM1	100	75.982	Latimeria_chalumnae
ENSPCIG00000002491	R3HDM1	100	76.145	ENSLOCG00000001641	r3hdm1	100	67.389	Lepisosteus_oculatus
ENSPCIG00000002491	R3HDM1	100	90.441	ENSLAFG00000009065	R3HDM1	100	84.952	Loxodonta_africana
ENSPCIG00000002491	R3HDM1	100	84.054	ENSMFAG00000030331	R3HDM1	100	90.659	Macaca_fascicularis
ENSPCIG00000002491	R3HDM1	100	83.874	ENSMMUG00000009844	R3HDM1	100	90.659	Macaca_mulatta
ENSPCIG00000002491	R3HDM1	100	83.874	ENSMNEG00000027793	R3HDM1	100	90.659	Macaca_nemestrina
ENSPCIG00000002491	R3HDM1	100	84.144	ENSMLEG00000043189	R3HDM1	100	90.659	Mandrillus_leucophaeus
ENSPCIG00000002491	R3HDM1	88	59.382	ENSMAMG00000004532	r3hdm1	91	59.382	Mastacembelus_armatus
ENSPCIG00000002491	R3HDM1	88	59.198	ENSMZEG00005003157	r3hdm1	89	66.987	Maylandia_zebra
ENSPCIG00000002491	R3HDM1	100	81.108	ENSMGAG00000012461	R3HDM1	100	80.926	Meleagris_gallopavo
ENSPCIG00000002491	R3HDM1	100	89.216	ENSMAUG00000010315	R3hdm1	100	89.965	Mesocricetus_auratus
ENSPCIG00000002491	R3HDM1	100	83.363	ENSMICG00000005900	-	100	90.110	Microcebus_murinus
ENSPCIG00000002491	R3HDM1	89	88.472	ENSMICG00000042655	-	100	89.835	Microcebus_murinus
ENSPCIG00000002491	R3HDM1	50	87.316	ENSMOCG00000019833	-	100	89.619	Microtus_ochrogaster
ENSPCIG00000002491	R3HDM1	89	95.204	ENSMODG00000000923	R3HDM1	97	93.750	Monodelphis_domestica
ENSPCIG00000002491	R3HDM1	99	58.294	ENSMALG00000009000	r3hdm1	91	58.531	Monopterus_albus
ENSPCIG00000002491	R3HDM1	100	89.461	MGP_CAROLIEiJ_G0014543	R3hdm1	100	90.417	Mus_caroli
ENSPCIG00000002491	R3HDM1	100	89.461	ENSMUSG00000056211	R3hdm1	100	90.417	Mus_musculus
ENSPCIG00000002491	R3HDM1	100	89.216	MGP_PahariEiJ_G0027779	R3hdm1	100	90.417	Mus_pahari
ENSPCIG00000002491	R3HDM1	100	89.461	MGP_SPRETEiJ_G0015350	R3hdm1	100	90.417	Mus_spretus
ENSPCIG00000002491	R3HDM1	100	85.199	ENSMPUG00000002412	R3HDM1	100	85.289	Mustela_putorius_furo
ENSPCIG00000002491	R3HDM1	100	83.827	ENSMLUG00000013824	R3HDM1	100	83.648	Myotis_lucifugus
ENSPCIG00000002491	R3HDM1	100	84.324	ENSNLEG00000008622	R3HDM1	100	90.385	Nomascus_leucogenys
ENSPCIG00000002491	R3HDM1	85	97.166	ENSMEUG00000011784	R3HDM1	95	97.166	Notamacropus_eugenii
ENSPCIG00000002491	R3HDM1	100	89.951	ENSODEG00000008607	R3HDM1	100	90.311	Octodon_degus
ENSPCIG00000002491	R3HDM1	94	64.305	ENSONIG00000012017	r3hdm1	93	65.130	Oreochromis_niloticus
ENSPCIG00000002491	R3HDM1	100	84.497	ENSOANG00000007987	R3HDM1	100	84.887	Ornithorhynchus_anatinus
ENSPCIG00000002491	R3HDM1	89	83.249	ENSOCUG00000017366	R3HDM1	98	83.249	Oryctolagus_cuniculus
ENSPCIG00000002491	R3HDM1	88	58.195	ENSORLG00000004297	r3hdm1	85	66.129	Oryzias_latipes
ENSPCIG00000002491	R3HDM1	88	58.432	ENSORLG00015017355	r3hdm1	85	66.452	Oryzias_latipes_hsok
ENSPCIG00000002491	R3HDM1	100	83.830	ENSOGAG00000003136	R3HDM1	100	83.921	Otolemur_garnettii
ENSPCIG00000002491	R3HDM1	100	84.755	ENSOARG00000010788	R3HDM1	100	84.755	Ovis_aries
ENSPCIG00000002491	R3HDM1	100	84.173	ENSPPAG00000027858	R3HDM1	100	90.659	Pan_paniscus
ENSPCIG00000002491	R3HDM1	100	85.081	ENSPPRG00000002626	R3HDM1	100	90.934	Panthera_pardus
ENSPCIG00000002491	R3HDM1	100	85.172	ENSPTIG00000016581	R3HDM1	100	91.209	Panthera_tigris_altaica
ENSPCIG00000002491	R3HDM1	100	84.083	ENSPTRG00000012494	R3HDM1	100	90.659	Pan_troglodytes
ENSPCIG00000002491	R3HDM1	100	84.144	ENSPANG00000026448	R3HDM1	100	90.659	Papio_anubis
ENSPCIG00000002491	R3HDM1	99	66.995	ENSPKIG00000004328	r3hdm1	91	76.433	Paramormyrops_kingsleyae
ENSPCIG00000002491	R3HDM1	100	81.397	ENSPSIG00000012915	R3HDM1	100	81.307	Pelodiscus_sinensis
ENSPCIG00000002491	R3HDM1	100	88.480	ENSPEMG00000015187	R3hdm1	100	89.619	Peromyscus_maniculatus_bairdii
ENSPCIG00000002491	R3HDM1	87	59.893	ENSPMAG00000003369	-	98	45.212	Petromyzon_marinus
ENSPCIG00000002491	R3HDM1	88	59.338	ENSPFOG00000015036	r3hdm1	94	59.102	Poecilia_formosa
ENSPCIG00000002491	R3HDM1	88	46.146	ENSPLAG00000018042	r3hdm1	99	46.146	Poecilia_latipinna
ENSPCIG00000002491	R3HDM1	88	46.237	ENSPMEG00000023947	r3hdm1	84	67.532	Poecilia_mexicana
ENSPCIG00000002491	R3HDM1	88	59.857	ENSPREG00000007902	r3hdm1	90	66.873	Poecilia_reticulata
ENSPCIG00000002491	R3HDM1	100	83.258	ENSPPYG00000012815	R3HDM1	100	83.078	Pongo_abelii
ENSPCIG00000002491	R3HDM1	95	82.385	ENSPCAG00000006208	R3HDM1	95	83.469	Procavia_capensis
ENSPCIG00000002491	R3HDM1	100	81.605	ENSPCOG00000012698	R3HDM1	100	83.471	Propithecus_coquereli
ENSPCIG00000002491	R3HDM1	100	84.069	ENSPVAG00000006098	R3HDM1	100	76.349	Pteropus_vampyrus
ENSPCIG00000002491	R3HDM1	88	71.472	ENSPNAG00000013952	r3hdm1	100	63.170	Pygocentrus_nattereri
ENSPCIG00000002491	R3HDM1	88	74.923	ENSPNAG00000005436	R3HDM1	99	76.603	Pygocentrus_nattereri
ENSPCIG00000002491	R3HDM1	58	40.549	ENSPNAG00000004162	arpp21	87	39.497	Pygocentrus_nattereri
ENSPCIG00000002491	R3HDM1	100	88.971	ENSRNOG00000004099	R3hdm1	100	80.543	Rattus_norvegicus
ENSPCIG00000002491	R3HDM1	100	87.961	ENSRBIG00000033317	R3HDM1	100	94.485	Rhinopithecus_bieti
ENSPCIG00000002491	R3HDM1	100	83.618	ENSRROG00000034534	R3HDM1	100	90.934	Rhinopithecus_roxellana
ENSPCIG00000002491	R3HDM1	100	84.505	ENSSBOG00000020389	R3HDM1	100	89.835	Saimiri_boliviensis_boliviensis
ENSPCIG00000002491	R3HDM1	100	97.901	ENSSHAG00000016999	R3HDM1	100	97.901	Sarcophilus_harrisii
ENSPCIG00000002491	R3HDM1	93	67.202	ENSSFOG00015019851	-	96	64.286	Scleropages_formosus
ENSPCIG00000002491	R3HDM1	100	71.014	ENSSFOG00015014134	r3hdm1	100	62.787	Scleropages_formosus
ENSPCIG00000002491	R3HDM1	99	43.980	ENSSMAG00000001669	r3hdm1	99	43.969	Scophthalmus_maximus
ENSPCIG00000002491	R3HDM1	89	46.038	ENSSDUG00000010749	r3hdm1	85	67.628	Seriola_dumerili
ENSPCIG00000002491	R3HDM1	99	45.962	ENSSLDG00000004499	r3hdm1	91	60.190	Seriola_lalandi_dorsalis
ENSPCIG00000002491	R3HDM1	73	78.218	ENSSARG00000000352	-	69	78.218	Sorex_araneus
ENSPCIG00000002491	R3HDM1	100	83.651	ENSSPUG00000004167	R3HDM1	100	83.379	Sphenodon_punctatus
ENSPCIG00000002491	R3HDM1	88	60.377	ENSSPAG00000004648	r3hdm1	91	60.142	Stegastes_partitus
ENSPCIG00000002491	R3HDM1	100	90.441	ENSSSCG00000015692	R3HDM1	100	86.538	Sus_scrofa
ENSPCIG00000002491	R3HDM1	100	76.316	ENSTGUG00000011750	R3HDM1	100	76.044	Taeniopygia_guttata
ENSPCIG00000002491	R3HDM1	77	66.774	ENSTRUG00000011654	r3hdm1	84	66.774	Takifugu_rubripes
ENSPCIG00000002491	R3HDM1	88	44.737	ENSTNIG00000010362	r3hdm1	100	45.083	Tetraodon_nigroviridis
ENSPCIG00000002491	R3HDM1	100	83.824	ENSTTRG00000003935	R3HDM1	100	79.257	Tursiops_truncatus
ENSPCIG00000002491	R3HDM1	70	85.897	ENSUAMG00000024806	R3HDM1	99	88.787	Ursus_americanus
ENSPCIG00000002491	R3HDM1	93	89.812	ENSUMAG00000005552	R3HDM1	100	91.209	Ursus_maritimus
ENSPCIG00000002491	R3HDM1	97	80.702	ENSVPAG00000007333	R3HDM1	93	80.972	Vicugna_pacos
ENSPCIG00000002491	R3HDM1	100	90.931	ENSVVUG00000006457	R3HDM1	100	90.934	Vulpes_vulpes
ENSPCIG00000002491	R3HDM1	89	69.534	ENSXETG00000019330	r3hdm1	100	69.332	Xenopus_tropicalis
ENSPCIG00000002491	R3HDM1	70	48.387	ENSXCOG00000017448	r3hdm1	94	50.777	Xiphophorus_couchianus
ENSPCIG00000002491	R3HDM1	88	60.142	ENSXMAG00000007885	r3hdm1	91	59.906	Xiphophorus_maculatus