EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000002643 (Gene tree)
Gene ID: 110195387
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 26034 bases
Position: chrFUWB01001778.1:88649-114682
Accession: 110195387
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000003234	CPSF_A	PF03178.15	7.5e-86	1	1
ENSPCIP00000003212	CPSF_A	PF03178.15	1.1e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000004015	DDB1-202	3902	-	ENSPCIP00000003234	1101 (aa)	-	-
ENSPCIT00000003990	DDB1-201	4019	XM_020968129	ENSPCIP00000003212	1140 (aa)	XP_020823788	-

Gene Model

Click here to download ENSPCIG00000002643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000002643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000002643	DDB1	100	98.947	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSPCIG00000002643	DDB1	98	91.644	ENSAPOG00000005036	ddb1	99	91.837	Acanthochromis_polyacanthus
ENSPCIG00000002643	DDB1	100	99.035	ENSAMEG00000016518	DDB1	100	99.035	Ailuropoda_melanoleuca
ENSPCIG00000002643	DDB1	86	92.143	ENSACIG00000020624	ddb1	99	92.143	Amphilophus_citrinellus
ENSPCIG00000002643	DDB1	100	91.316	ENSAOCG00000003066	ddb1	100	91.316	Amphiprion_ocellaris
ENSPCIG00000002643	DDB1	100	91.404	ENSAPEG00000000092	ddb1	100	91.404	Amphiprion_percula
ENSPCIG00000002643	DDB1	94	91.907	ENSATEG00000020571	ddb1	97	91.907	Anabas_testudineus
ENSPCIG00000002643	DDB1	98	96.800	ENSAPLG00000007174	DDB1	99	96.800	Anas_platyrhynchos
ENSPCIG00000002643	DDB1	100	97.193	ENSACAG00000017758	DDB1	100	97.193	Anolis_carolinensis
ENSPCIG00000002643	DDB1	100	98.947	ENSANAG00000021878	DDB1	100	98.947	Aotus_nancymaae
ENSPCIG00000002643	DDB1	100	91.667	ENSACLG00000012401	ddb1	100	91.667	Astatotilapia_calliptera
ENSPCIG00000002643	DDB1	100	99.035	ENSBTAG00000021569	DDB1	93	99.035	Bos_taurus
ENSPCIG00000002643	DDB1	100	37.126	WBGene00010890	ddb-1	100	37.040	Caenorhabditis_elegans
ENSPCIG00000002643	DDB1	100	98.947	ENSCJAG00000019319	DDB1	100	98.947	Callithrix_jacchus
ENSPCIG00000002643	DDB1	100	99.035	ENSCAFG00000016264	DDB1	100	99.035	Canis_familiaris
ENSPCIG00000002643	DDB1	94	98.698	ENSCAFG00020012722	DDB1	99	98.698	Canis_lupus_dingo
ENSPCIG00000002643	DDB1	100	99.035	ENSCHIG00000014969	DDB1	100	99.035	Capra_hircus
ENSPCIG00000002643	DDB1	100	98.772	ENSTSYG00000008027	DDB1	100	98.772	Carlito_syrichta
ENSPCIG00000002643	DDB1	98	98.570	ENSCAPG00000010786	DDB1	100	98.570	Cavia_aperea
ENSPCIG00000002643	DDB1	100	98.596	ENSCPOG00000009956	DDB1	100	98.596	Cavia_porcellus
ENSPCIG00000002643	DDB1	100	98.947	ENSCCAG00000035883	DDB1	100	98.947	Cebus_capucinus
ENSPCIG00000002643	DDB1	100	96.441	ENSCATG00000044495	DDB1	100	96.441	Cercocebus_atys
ENSPCIG00000002643	DDB1	100	98.772	ENSCLAG00000004126	DDB1	100	98.772	Chinchilla_lanigera
ENSPCIG00000002643	DDB1	100	98.947	ENSCSAG00000006392	DDB1	100	98.947	Chlorocebus_sabaeus
ENSPCIG00000002643	DDB1	88	92.045	ENSCHOG00000011377	DDB1	90	92.045	Choloepus_hoffmanni
ENSPCIG00000002643	DDB1	100	98.246	ENSCPBG00000017728	DDB1	100	98.246	Chrysemys_picta_bellii
ENSPCIG00000002643	DDB1	100	61.979	ENSCING00000007437	-	100	61.892	Ciona_intestinalis
ENSPCIG00000002643	DDB1	94	60.276	ENSCSAVG00000004783	-	100	60.276	Ciona_savignyi
ENSPCIG00000002643	DDB1	100	98.947	ENSCANG00000019948	DDB1	100	98.947	Colobus_angolensis_palliatus
ENSPCIG00000002643	DDB1	100	99.123	ENSCGRG00001016599	Ddb1	100	99.123	Cricetulus_griseus_chok1gshd
ENSPCIG00000002643	DDB1	100	99.123	ENSCGRG00000013427	Ddb1	100	99.123	Cricetulus_griseus_crigri
ENSPCIG00000002643	DDB1	93	91.423	ENSCSEG00000012499	ddb1	99	89.980	Cynoglossus_semilaevis
ENSPCIG00000002643	DDB1	94	91.519	ENSCVAG00000019531	ddb1	99	91.519	Cyprinodon_variegatus
ENSPCIG00000002643	DDB1	100	88.879	ENSDARG00000074431	ddb1	100	88.879	Danio_rerio
ENSPCIG00000002643	DDB1	94	98.605	ENSDNOG00000014884	DDB1	97	98.605	Dasypus_novemcinctus
ENSPCIG00000002643	DDB1	87	99.548	ENSDORG00000000127	Ddb1	100	99.548	Dipodomys_ordii
ENSPCIG00000002643	DDB1	100	61.048	FBgn0260962	pic	100	60.839	Drosophila_melanogaster
ENSPCIG00000002643	DDB1	73	99.606	ENSETEG00000001053	-	71	99.606	Echinops_telfairi
ENSPCIG00000002643	DDB1	78	84.589	ENSEBUG00000014593	ddb1	97	84.589	Eptatretus_burgeri
ENSPCIG00000002643	DDB1	100	98.860	ENSEASG00005008184	DDB1	100	98.860	Equus_asinus_asinus
ENSPCIG00000002643	DDB1	100	98.947	ENSECAG00000012136	DDB1	100	98.947	Equus_caballus
ENSPCIG00000002643	DDB1	85	96.465	ENSEEUG00000003194	DDB1	85	96.465	Erinaceus_europaeus
ENSPCIG00000002643	DDB1	61	31.447	ENSEEUG00000015611	SF3B3	57	31.447	Erinaceus_europaeus
ENSPCIG00000002643	DDB1	100	91.316	ENSELUG00000023868	ddb1	100	91.316	Esox_lucius
ENSPCIG00000002643	DDB1	100	99.035	ENSFCAG00000029716	DDB1	100	99.035	Felis_catus
ENSPCIG00000002643	DDB1	100	97.113	ENSFALG00000011981	DDB1	100	97.113	Ficedula_albicollis
ENSPCIG00000002643	DDB1	100	98.860	ENSFDAG00000005128	DDB1	100	98.860	Fukomys_damarensis
ENSPCIG00000002643	DDB1	90	90.588	ENSFHEG00000022133	ddb1	98	90.670	Fundulus_heteroclitus
ENSPCIG00000002643	DDB1	79	94.983	ENSGMOG00000019386	ddb1	94	94.983	Gadus_morhua
ENSPCIG00000002643	DDB1	100	97.456	ENSGALG00000042333	DDB1	100	97.456	Gallus_gallus
ENSPCIG00000002643	DDB1	94	91.240	ENSGAFG00000013142	ddb1	99	91.240	Gambusia_affinis
ENSPCIG00000002643	DDB1	96	90.834	ENSGACG00000017182	ddb1	100	90.834	Gasterosteus_aculeatus
ENSPCIG00000002643	DDB1	95	98.155	ENSGAGG00000014124	DDB1	100	98.155	Gopherus_agassizii
ENSPCIG00000002643	DDB1	100	98.947	ENSGGOG00000004052	DDB1	100	98.947	Gorilla_gorilla
ENSPCIG00000002643	DDB1	100	91.667	ENSHBUG00000008873	ddb1	100	91.667	Haplochromis_burtoni
ENSPCIG00000002643	DDB1	100	98.596	ENSHGLG00000018430	DDB1	100	98.596	Heterocephalus_glaber_female
ENSPCIG00000002643	DDB1	100	97.544	ENSHGLG00100014475	DDB1	100	97.544	Heterocephalus_glaber_male
ENSPCIG00000002643	DDB1	94	91.171	ENSHCOG00000018670	ddb1	98	91.171	Hippocampus_comes
ENSPCIG00000002643	DDB1	100	90.789	ENSIPUG00000005612	DDB1	100	90.789	Ictalurus_punctatus
ENSPCIG00000002643	DDB1	100	98.947	ENSSTOG00000007552	DDB1	100	98.947	Ictidomys_tridecemlineatus
ENSPCIG00000002643	DDB1	100	98.947	ENSJJAG00000017769	Ddb1	100	98.947	Jaculus_jaculus
ENSPCIG00000002643	DDB1	94	91.333	ENSKMAG00000002315	ddb1	99	91.333	Kryptolebias_marmoratus
ENSPCIG00000002643	DDB1	85	91.813	ENSLBEG00000017065	ddb1	99	91.813	Labrus_bergylta
ENSPCIG00000002643	DDB1	100	93.608	ENSLACG00000017611	DDB1	100	93.608	Latimeria_chalumnae
ENSPCIG00000002643	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSPCIG00000002643	DDB1	100	98.772	ENSLAFG00000011513	DDB1	100	98.772	Loxodonta_africana
ENSPCIG00000002643	DDB1	100	98.947	ENSMFAG00000042035	DDB1	100	98.947	Macaca_fascicularis
ENSPCIG00000002643	DDB1	99	98.939	ENSMMUG00000002691	DDB1	99	98.939	Macaca_mulatta
ENSPCIG00000002643	DDB1	100	98.947	ENSMNEG00000031559	DDB1	100	98.947	Macaca_nemestrina
ENSPCIG00000002643	DDB1	100	98.947	ENSMLEG00000044136	DDB1	100	98.947	Mandrillus_leucophaeus
ENSPCIG00000002643	DDB1	100	91.754	ENSMAMG00000014372	ddb1	100	91.754	Mastacembelus_armatus
ENSPCIG00000002643	DDB1	100	91.579	ENSMZEG00005013835	ddb1	100	91.579	Maylandia_zebra
ENSPCIG00000002643	DDB1	94	96.834	ENSMGAG00000004990	DDB1	100	96.834	Meleagris_gallopavo
ENSPCIG00000002643	DDB1	100	99.123	ENSMAUG00000012926	Ddb1	100	99.123	Mesocricetus_auratus
ENSPCIG00000002643	DDB1	100	98.947	ENSMICG00000013703	DDB1	100	98.947	Microcebus_murinus
ENSPCIG00000002643	DDB1	100	98.860	ENSMOCG00000020499	Ddb1	100	98.860	Microtus_ochrogaster
ENSPCIG00000002643	DDB1	86	91.939	ENSMMOG00000001758	ddb1	99	91.939	Mola_mola
ENSPCIG00000002643	DDB1	100	89.533	ENSMODG00000020353	DDB1	100	89.533	Monodelphis_domestica
ENSPCIG00000002643	DDB1	100	91.667	ENSMALG00000014071	ddb1	100	91.667	Monopterus_albus
ENSPCIG00000002643	DDB1	100	99.123	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.123	Mus_caroli
ENSPCIG00000002643	DDB1	100	98.947	ENSMUSG00000024740	Ddb1	100	98.947	Mus_musculus
ENSPCIG00000002643	DDB1	100	99.123	MGP_PahariEiJ_G0014189	Ddb1	100	99.123	Mus_pahari
ENSPCIG00000002643	DDB1	100	99.035	MGP_SPRETEiJ_G0023609	Ddb1	100	99.035	Mus_spretus
ENSPCIG00000002643	DDB1	100	95.702	ENSMPUG00000014200	DDB1	100	95.702	Mustela_putorius_furo
ENSPCIG00000002643	DDB1	100	98.947	ENSMLUG00000013232	DDB1	100	98.947	Myotis_lucifugus
ENSPCIG00000002643	DDB1	100	98.860	ENSNGAG00000009384	Ddb1	100	98.860	Nannospalax_galili
ENSPCIG00000002643	DDB1	100	91.754	ENSNBRG00000019581	ddb1	100	91.754	Neolamprologus_brichardi
ENSPCIG00000002643	DDB1	100	95.833	ENSNLEG00000002022	DDB1	100	95.833	Nomascus_leucogenys
ENSPCIG00000002643	DDB1	91	99.648	ENSMEUG00000001099	DDB1	93	99.648	Notamacropus_eugenii
ENSPCIG00000002643	DDB1	90	90.495	ENSOPRG00000008254	DDB1	90	90.495	Ochotona_princeps
ENSPCIG00000002643	DDB1	100	98.509	ENSODEG00000002419	DDB1	100	98.509	Octodon_degus
ENSPCIG00000002643	DDB1	100	91.667	ENSONIG00000005804	ddb1	100	91.667	Oreochromis_niloticus
ENSPCIG00000002643	DDB1	91	98.547	ENSOANG00000004897	DDB1	100	98.547	Ornithorhynchus_anatinus
ENSPCIG00000002643	DDB1	100	98.947	ENSOCUG00000001667	DDB1	100	98.947	Oryctolagus_cuniculus
ENSPCIG00000002643	DDB1	96	90.284	ENSORLG00000001399	ddb1	98	91.547	Oryzias_latipes
ENSPCIG00000002643	DDB1	96	90.192	ENSORLG00020001277	ddb1	97	90.192	Oryzias_latipes_hni
ENSPCIG00000002643	DDB1	94	91.349	ENSORLG00015002080	ddb1	99	91.349	Oryzias_latipes_hsok
ENSPCIG00000002643	DDB1	96	90.155	ENSOMEG00000006181	ddb1	99	90.155	Oryzias_melastigma
ENSPCIG00000002643	DDB1	100	98.947	ENSOGAG00000016103	DDB1	100	98.947	Otolemur_garnettii
ENSPCIG00000002643	DDB1	99	99.020	ENSOARG00000011716	DDB1	98	99.020	Ovis_aries
ENSPCIG00000002643	DDB1	100	98.947	ENSPPAG00000035343	DDB1	100	98.947	Pan_paniscus
ENSPCIG00000002643	DDB1	100	99.035	ENSPPRG00000013300	DDB1	100	99.035	Panthera_pardus
ENSPCIG00000002643	DDB1	98	99.017	ENSPTIG00000006909	DDB1	98	99.017	Panthera_tigris_altaica
ENSPCIG00000002643	DDB1	100	98.947	ENSPTRG00000003737	DDB1	100	98.947	Pan_troglodytes
ENSPCIG00000002643	DDB1	100	98.947	ENSPANG00000000242	DDB1	100	98.947	Papio_anubis
ENSPCIG00000002643	DDB1	94	91.612	ENSPKIG00000019213	ddb1	94	91.612	Paramormyrops_kingsleyae
ENSPCIG00000002643	DDB1	98	97.420	ENSPSIG00000013275	DDB1	100	97.420	Pelodiscus_sinensis
ENSPCIG00000002643	DDB1	86	91.837	ENSPMGG00000021179	ddb1	99	91.837	Periophthalmus_magnuspinnatus
ENSPCIG00000002643	DDB1	100	99.123	ENSPEMG00000012241	Ddb1	100	99.123	Peromyscus_maniculatus_bairdii
ENSPCIG00000002643	DDB1	89	86.739	ENSPMAG00000008479	ddb1	100	86.739	Petromyzon_marinus
ENSPCIG00000002643	DDB1	100	90.885	ENSPFOG00000002768	ddb1	100	90.885	Poecilia_formosa
ENSPCIG00000002643	DDB1	100	90.702	ENSPLAG00000017227	ddb1	100	90.702	Poecilia_latipinna
ENSPCIG00000002643	DDB1	100	90.702	ENSPMEG00000011398	ddb1	100	90.702	Poecilia_mexicana
ENSPCIG00000002643	DDB1	94	91.349	ENSPREG00000004440	ddb1	98	91.349	Poecilia_reticulata
ENSPCIG00000002643	DDB1	100	94.154	ENSPPYG00000003193	DDB1	100	94.154	Pongo_abelii
ENSPCIG00000002643	DDB1	85	98.806	ENSPCAG00000011040	DDB1	85	98.806	Procavia_capensis
ENSPCIG00000002643	DDB1	100	97.461	ENSPCOG00000015176	DDB1	100	97.461	Propithecus_coquereli
ENSPCIG00000002643	DDB1	100	98.860	ENSPVAG00000003847	DDB1	100	98.860	Pteropus_vampyrus
ENSPCIG00000002643	DDB1	50	90.036	ENSPNYG00000010482	ddb1	100	90.036	Pundamilia_nyererei
ENSPCIG00000002643	DDB1	94	91.612	ENSPNAG00000006635	ddb1	97	91.612	Pygocentrus_nattereri
ENSPCIG00000002643	DDB1	100	99.035	ENSRNOG00000020715	Ddb1	100	99.035	Rattus_norvegicus
ENSPCIG00000002643	DDB1	100	98.947	ENSRBIG00000033611	DDB1	100	98.947	Rhinopithecus_bieti
ENSPCIG00000002643	DDB1	100	98.947	ENSRROG00000041407	DDB1	100	98.947	Rhinopithecus_roxellana
ENSPCIG00000002643	DDB1	100	99.035	ENSSBOG00000019775	DDB1	100	99.035	Saimiri_boliviensis_boliviensis
ENSPCIG00000002643	DDB1	94	97.196	ENSSHAG00000011600	DDB1	100	97.196	Sarcophilus_harrisii
ENSPCIG00000002643	DDB1	94	91.729	ENSSFOG00015011151	ddb1	97	91.729	Scleropages_formosus
ENSPCIG00000002643	DDB1	100	91.228	ENSSMAG00000009495	ddb1	100	91.228	Scophthalmus_maximus
ENSPCIG00000002643	DDB1	100	91.579	ENSSDUG00000004642	ddb1	100	91.579	Seriola_dumerili
ENSPCIG00000002643	DDB1	100	91.579	ENSSLDG00000015804	ddb1	100	91.579	Seriola_lalandi_dorsalis
ENSPCIG00000002643	DDB1	72	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSPCIG00000002643	DDB1	100	98.070	ENSSPUG00000019338	DDB1	100	98.070	Sphenodon_punctatus
ENSPCIG00000002643	DDB1	94	91.814	ENSSPAG00000009888	ddb1	99	91.814	Stegastes_partitus
ENSPCIG00000002643	DDB1	100	97.982	ENSSSCG00000013094	DDB1	100	97.982	Sus_scrofa
ENSPCIG00000002643	DDB1	100	97.281	ENSTGUG00000006414	DDB1	100	97.281	Taeniopygia_guttata
ENSPCIG00000002643	DDB1	94	90.587	ENSTRUG00000016682	ddb1	98	90.587	Takifugu_rubripes
ENSPCIG00000002643	DDB1	88	85.230	ENSTNIG00000009565	ddb1	99	85.230	Tetraodon_nigroviridis
ENSPCIG00000002643	DDB1	96	94.125	ENSTTRG00000011055	DDB1	94	94.125	Tursiops_truncatus
ENSPCIG00000002643	DDB1	94	98.698	ENSUAMG00000017793	DDB1	93	98.698	Ursus_americanus
ENSPCIG00000002643	DDB1	94	98.698	ENSUMAG00000011788	DDB1	98	98.698	Ursus_maritimus
ENSPCIG00000002643	DDB1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
ENSPCIG00000002643	DDB1	100	98.947	ENSVVUG00000004987	DDB1	100	98.947	Vulpes_vulpes
ENSPCIG00000002643	DDB1	100	93.182	ENSXETG00000008820	ddb1	100	93.182	Xenopus_tropicalis
ENSPCIG00000002643	DDB1	86	91.429	ENSXCOG00000013956	ddb1	99	91.429	Xiphophorus_couchianus
ENSPCIG00000002643	DDB1	94	91.240	ENSXMAG00000000022	ddb1	99	91.240	Xiphophorus_maculatus