EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000003197 (Gene tree)
Gene ID: 110196789
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 5653 bases
Position: chrFUWB01011899.1:12000-17652
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000003905	SR-25	PF10500.9	1.3e-87	1	1
ENSPCIP00000003907	SR-25	PF10500.9	2.4e-66	1	1
ENSPCIP00000003914	SR-25	PF10500.9	5.2e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000004868	-	1017	-	ENSPCIP00000003914	338 (aa)	-	-
ENSPCIT00000004862	-	777	-	ENSPCIP00000003907	258 (aa)	-	-
ENSPCIT00000004859	-	966	-	ENSPCIP00000003905	321 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000003197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000003197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000003197	-	63	64.162	ENSG00000182196	ARL6IP4	81	59.429	Homo_sapiens
ENSPCIG00000003197	-	69	59.459	ENSANAG00000035845	ARL6IP4	80	57.979	Aotus_nancymaae
ENSPCIG00000003197	-	69	62.567	ENSBTAG00000001594	ARL6IP4	52	59.524	Bos_taurus
ENSPCIG00000003197	-	69	58.378	ENSCJAG00000016476	-	80	56.915	Callithrix_jacchus
ENSPCIG00000003197	-	69	64.171	ENSCHIG00000014369	-	52	60.317	Capra_hircus
ENSPCIG00000003197	-	72	64.433	ENSEASG00005012544	-	52	61.111	Equus_asinus_asinus
ENSPCIG00000003197	-	82	61.644	ENSECAG00000023197	ARL6IP4	52	61.111	Equus_caballus
ENSPCIG00000003197	-	72	63.077	ENSFCAG00000006132	-	53	62.205	Felis_catus
ENSPCIG00000003197	-	72	56.477	ENSFDAG00000009535	-	79	55.851	Fukomys_damarensis
ENSPCIG00000003197	-	72	58.549	ENSHGLG00000011726	-	80	58.511	Heterocephalus_glaber_female
ENSPCIG00000003197	-	72	58.549	ENSHGLG00100018434	-	80	58.511	Heterocephalus_glaber_male
ENSPCIG00000003197	-	72	60.309	ENSJJAG00000019114	Arl6ip4	79	56.383	Jaculus_jaculus
ENSPCIG00000003197	-	72	59.585	ENSLAFG00000005314	-	55	87.379	Loxodonta_africana
ENSPCIG00000003197	-	52	53.571	ENSMAMG00000017190	arl6ip4	65	44.805	Mastacembelus_armatus
ENSPCIG00000003197	-	72	56.477	MGP_CAROLIEiJ_G0027744	Arl6ip4	52	85.437	Mus_caroli
ENSPCIG00000003197	-	72	55.959	ENSMUSG00000029404	Arl6ip4	52	84.466	Mus_musculus
ENSPCIG00000003197	-	72	56.995	MGP_PahariEiJ_G0024324	Arl6ip4	50	86.275	Mus_pahari
ENSPCIG00000003197	-	72	55.959	MGP_SPRETEiJ_G0028742	Arl6ip4	52	85.437	Mus_spretus
ENSPCIG00000003197	-	65	58.621	ENSNGAG00000023492	Arl6ip4	80	59.043	Nannospalax_galili
ENSPCIG00000003197	-	72	58.549	ENSODEG00000010162	-	75	58.857	Octodon_degus
ENSPCIG00000003197	-	72	62.564	ENSPPRG00000003154	-	53	62.205	Panthera_pardus
ENSPCIG00000003197	-	84	50.224	ENSPANG00000029614	-	54	86.408	Papio_anubis
ENSPCIG00000003197	-	52	48.966	ENSPLAG00000008160	arl6ip4	57	43.796	Poecilia_latipinna
ENSPCIG00000003197	-	72	60.417	ENSPCOG00000018734	-	53	60.317	Propithecus_coquereli
ENSPCIG00000003197	-	67	61.453	ENSRNOG00000001080	Arl6ip4	80	59.043	Rattus_norvegicus
ENSPCIG00000003197	-	67	63.483	ENSSBOG00000033244	-	75	62.286	Saimiri_boliviensis_boliviensis
ENSPCIG00000003197	-	57	48.428	ENSSMAG00000016606	arl6ip4	57	47.552	Scophthalmus_maximus
ENSPCIG00000003197	-	69	62.051	ENSSSCG00000009782	-	50	61.111	Sus_scrofa
ENSPCIG00000003197	-	72	64.103	ENSUAMG00000000545	-	53	60.630	Ursus_americanus
ENSPCIG00000003197	-	72	64.103	ENSUMAG00000004427	-	53	60.630	Ursus_maritimus
ENSPCIG00000003197	-	57	49.682	ENSXCOG00000000834	arl6ip4	75	47.651	Xiphophorus_couchianus
ENSPCIG00000003197	-	57	49.682	ENSXMAG00000022410	arl6ip4	77	47.651	Xiphophorus_maculatus