EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000003293 (Gene tree)
Gene ID: 110198063
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 8423 bases
Position: chrFUWB01001331.1:339884-348306
Accession: 110198063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000004027	RRM_1	PF00076.22	1.2e-62	1	4
ENSPCIP00000004027	RRM_1	PF00076.22	1.2e-62	2	4
ENSPCIP00000004027	RRM_1	PF00076.22	1.2e-62	3	4
ENSPCIP00000004027	RRM_1	PF00076.22	1.2e-62	4	4
ENSPCIP00000004032	RRM_1	PF00076.22	1.6e-62	1	4
ENSPCIP00000004032	RRM_1	PF00076.22	1.6e-62	2	4
ENSPCIP00000004032	RRM_1	PF00076.22	1.6e-62	3	4
ENSPCIP00000004032	RRM_1	PF00076.22	1.6e-62	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000005011	-	2357	-	ENSPCIP00000004032	740 (aa)	-	-
ENSPCIT00000005006	-	2392	XM_020972162	ENSPCIP00000004027	706 (aa)	XP_020827821	-

Gene Model

Click here to download ENSPCIG00000003293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000003293's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000003293	-	53	58.442	ENSAPOG00000023888	ncl	55	58.486	Acanthochromis_polyacanthus
ENSPCIG00000003293	-	60	39.593	ENSAPOG00000014534	-	66	40.360	Acanthochromis_polyacanthus
ENSPCIG00000003293	-	62	50.336	ENSACIG00000013234	ncl	61	57.218	Amphilophus_citrinellus
ENSPCIG00000003293	-	53	58.961	ENSAOCG00000003133	ncl	52	59.008	Amphiprion_ocellaris
ENSPCIG00000003293	-	58	39.765	ENSAOCG00000014792	-	60	40.665	Amphiprion_ocellaris
ENSPCIG00000003293	-	58	40.000	ENSAPEG00000013612	-	60	40.921	Amphiprion_percula
ENSPCIG00000003293	-	53	58.961	ENSAPEG00000002769	ncl	52	59.008	Amphiprion_percula
ENSPCIG00000003293	-	56	42.998	ENSATEG00000019862	-	74	42.778	Anabas_testudineus
ENSPCIG00000003293	-	53	57.922	ENSATEG00000013343	ncl	53	57.963	Anabas_testudineus
ENSPCIG00000003293	-	57	65.301	ENSAPLG00000012897	-	65	65.301	Anas_platyrhynchos
ENSPCIG00000003293	-	85	57.211	ENSACAG00000001006	-	52	66.324	Anolis_carolinensis
ENSPCIG00000003293	-	53	54.592	ENSAMXG00000001647	ncl	86	58.117	Astyanax_mexicanus
ENSPCIG00000003293	-	51	52.909	ENSCHIG00000012665	-	53	53.786	Capra_hircus
ENSPCIG00000003293	-	55	60.000	ENSCHIG00000003401	-	85	59.829	Capra_hircus
ENSPCIG00000003293	-	63	65.870	ENSCPBG00000016444	-	56	68.542	Chrysemys_picta_bellii
ENSPCIG00000003293	-	56	57.382	ENSCSEG00000015089	ncl	75	59.269	Cynoglossus_semilaevis
ENSPCIG00000003293	-	56	57.107	ENSCVAG00000012600	ncl	56	56.965	Cyprinodon_variegatus
ENSPCIG00000003293	-	53	59.248	ENSDARG00000002710	ncl	80	60.252	Danio_rerio
ENSPCIG00000003293	-	62	56.180	ENSDNOG00000031611	-	67	57.853	Dasypus_novemcinctus
ENSPCIG00000003293	-	66	44.295	ENSELUG00000022826	-	81	46.770	Esox_lucius
ENSPCIG00000003293	-	54	63.959	ENSFALG00000007592	-	55	64.031	Ficedula_albicollis
ENSPCIG00000003293	-	54	54.872	ENSFHEG00000018000	ncl	60	56.056	Fundulus_heteroclitus
ENSPCIG00000003293	-	55	54.337	ENSGMOG00000001341	ncl	59	54.474	Gadus_morhua
ENSPCIG00000003293	-	54	66.921	ENSGALG00000032930	NCL	55	66.837	Gallus_gallus
ENSPCIG00000003293	-	53	57.143	ENSGAFG00000015375	ncl	50	57.180	Gambusia_affinis
ENSPCIG00000003293	-	54	56.364	ENSGACG00000008970	ncl	60	56.545	Gasterosteus_aculeatus
ENSPCIG00000003293	-	54	56.218	ENSHBUG00000006869	ncl	52	56.728	Haplochromis_burtoni
ENSPCIG00000003293	-	53	58.031	ENSHCOG00000010234	ncl	52	58.073	Hippocampus_comes
ENSPCIG00000003293	-	50	57.273	ENSIPUG00000024556	ncl	84	58.006	Ictalurus_punctatus
ENSPCIG00000003293	-	57	57.317	ENSLBEG00000019073	ncl	59	57.317	Labrus_bergylta
ENSPCIG00000003293	-	52	41.099	ENSLBEG00000014278	-	81	41.047	Labrus_bergylta
ENSPCIG00000003293	-	52	41.316	ENSLBEG00000007915	-	61	42.120	Labrus_bergylta
ENSPCIG00000003293	-	66	47.031	ENSLACG00000022167	-	79	48.469	Latimeria_chalumnae
ENSPCIG00000003293	-	54	61.637	ENSLACG00000009328	ncl	56	61.697	Latimeria_chalumnae
ENSPCIG00000003293	-	62	37.310	ENSMAMG00000003479	-	69	37.984	Mastacembelus_armatus
ENSPCIG00000003293	-	54	55.959	ENSMZEG00005017438	ncl	52	56.464	Maylandia_zebra
ENSPCIG00000003293	-	52	66.667	ENSMGAG00000008147	-	84	71.121	Meleagris_gallopavo
ENSPCIG00000003293	-	50	58.861	ENSMMOG00000008553	ncl	86	58.917	Mola_mola
ENSPCIG00000003293	-	91	85.714	ENSMODG00000002470	-	91	85.385	Monodelphis_domestica
ENSPCIG00000003293	-	56	58.840	ENSMALG00000014827	ncl	52	33.684	Monopterus_albus
ENSPCIG00000003293	-	51	55.280	ENSMPUG00000001663	-	66	55.346	Mustela_putorius_furo
ENSPCIG00000003293	-	90	78.899	ENSMEUG00000012335	-	90	77.424	Notamacropus_eugenii
ENSPCIG00000003293	-	54	56.218	ENSONIG00000012508	ncl	52	56.728	Oreochromis_niloticus
ENSPCIG00000003293	-	80	65.488	ENSOANG00000008732	-	61	75.648	Ornithorhynchus_anatinus
ENSPCIG00000003293	-	54	33.249	ENSORLG00000004645	-	84	34.010	Oryzias_latipes
ENSPCIG00000003293	-	52	34.121	ENSORLG00020003497	-	70	35.519	Oryzias_latipes_hni
ENSPCIG00000003293	-	54	57.474	ENSORLG00020017943	ncl	51	57.881	Oryzias_latipes_hni
ENSPCIG00000003293	-	55	34.000	ENSORLG00015006613	-	72	35.519	Oryzias_latipes_hsok
ENSPCIG00000003293	-	50	60.502	ENSORLG00015013815	ncl	90	59.937	Oryzias_latipes_hsok
ENSPCIG00000003293	-	53	58.701	ENSOMEG00000020786	ncl	50	58.398	Oryzias_melastigma
ENSPCIG00000003293	-	54	34.010	ENSOMEG00000015864	-	82	34.010	Oryzias_melastigma
ENSPCIG00000003293	-	54	56.154	ENSPKIG00000002604	ncl	52	56.510	Paramormyrops_kingsleyae
ENSPCIG00000003293	-	72	63.636	ENSPSIG00000002361	-	58	66.746	Pelodiscus_sinensis
ENSPCIG00000003293	-	54	56.667	ENSPFOG00000024205	ncl	51	57.584	Poecilia_formosa
ENSPCIG00000003293	-	56	56.359	ENSPLAG00000024026	ncl	53	57.214	Poecilia_latipinna
ENSPCIG00000003293	-	54	56.667	ENSPMEG00000006000	ncl	51	57.584	Poecilia_mexicana
ENSPCIG00000003293	-	54	55.959	ENSPNYG00000020494	ncl	52	56.464	Pundamilia_nyererei
ENSPCIG00000003293	-	57	94.208	ENSSHAG00000007489	-	100	84.091	Sarcophilus_harrisii
ENSPCIG00000003293	-	72	36.961	ENSSMAG00000007582	-	63	41.058	Scophthalmus_maximus
ENSPCIG00000003293	-	63	51.416	ENSSMAG00000021241	ncl	56	58.128	Scophthalmus_maximus
ENSPCIG00000003293	-	62	40.389	ENSSDUG00000010922	-	82	40.561	Seriola_dumerili
ENSPCIG00000003293	-	53	57.963	ENSSDUG00000006128	ncl	84	57.702	Seriola_dumerili
ENSPCIG00000003293	-	59	40.625	ENSSLDG00000015784	-	82	40.260	Seriola_lalandi_dorsalis
ENSPCIG00000003293	-	63	61.966	ENSSPUG00000008244	-	60	63.861	Sphenodon_punctatus
ENSPCIG00000003293	-	51	59.932	ENSSPAG00000002637	ncl	83	60.000	Stegastes_partitus
ENSPCIG00000003293	-	58	39.765	ENSSPAG00000001859	-	61	40.000	Stegastes_partitus
ENSPCIG00000003293	-	52	56.183	ENSTRUG00000008185	ncl	54	55.091	Takifugu_rubripes
ENSPCIG00000003293	-	56	42.154	ENSXCOG00000003524	ncl	87	45.886	Xiphophorus_couchianus
ENSPCIG00000003293	-	54	58.205	ENSXMAG00000005914	ncl	51	58.098	Xiphophorus_maculatus