EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000003821 (Gene tree)
Gene ID: 110193686
Gene Symbol: PRPF4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 14818 bases
Position: chrFUWB01008189.1:27566-42383
Accession: 110193686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000004642	PRP4	PF08799.11	6.2e-14	1	1
ENSPCIP00000004636	PRP4	PF08799.11	6.2e-14	1	1
ENSPCIP00000004628	PRP4	PF08799.11	6.4e-14	1	1
ENSPCIP00000004621	PRP4	PF08799.11	6.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000005784	PRPF4-203	2433	XM_020965632	ENSPCIP00000004636	515 (aa)	XP_020821291	UPI000A288938
ENSPCIT00000005768	PRPF4-201	2359	-	ENSPCIP00000004621	537 (aa)	-	-
ENSPCIT00000005790	PRPF4-204	2029	-	ENSPCIP00000004642	514 (aa)	-	-
ENSPCIT00000005775	PRPF4-202	2475	-	ENSPCIP00000004628	529 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000003821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000003821's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000003821	PRPF4	53	31.579	ENSPCIG00000014731	-	88	31.579
ENSPCIG00000003821	PRPF4	57	32.934	ENSPCIG00000021811	TBL3	65	32.934

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000003821	PRPF4	99	95.331	ENSG00000136875	PRPF4	99	94.942	Homo_sapiens
ENSPCIG00000003821	PRPF4	98	77.339	ENSAPOG00000014132	prpf4	99	77.019	Acanthochromis_polyacanthus
ENSPCIG00000003821	PRPF4	99	95.136	ENSAMEG00000013048	PRPF4	96	95.136	Ailuropoda_melanoleuca
ENSPCIG00000003821	PRPF4	98	76.726	ENSACIG00000005579	prpf4	99	76.726	Amphilophus_citrinellus
ENSPCIG00000003821	PRPF4	98	76.181	ENSAOCG00000005457	prpf4	99	75.882	Amphiprion_ocellaris
ENSPCIG00000003821	PRPF4	98	75.984	ENSAPEG00000000776	prpf4	99	75.686	Amphiprion_percula
ENSPCIG00000003821	PRPF4	98	76.331	ENSATEG00000023013	prpf4	99	76.031	Anabas_testudineus
ENSPCIG00000003821	PRPF4	99	89.824	ENSAPLG00000006534	PRPF4	95	89.824	Anas_platyrhynchos
ENSPCIG00000003821	PRPF4	99	89.824	ENSACAG00000015110	PRPF4	98	89.824	Anolis_carolinensis
ENSPCIG00000003821	PRPF4	99	95.136	ENSANAG00000022464	PRPF4	95	95.136	Aotus_nancymaae
ENSPCIG00000003821	PRPF4	98	75.740	ENSACLG00000019031	prpf4	99	75.442	Astatotilapia_calliptera
ENSPCIG00000003821	PRPF4	98	62.572	ENSAMXG00000006756	prpf4	99	73.861	Astyanax_mexicanus
ENSPCIG00000003821	PRPF4	99	94.747	ENSBTAG00000004571	PRPF4	99	94.747	Bos_taurus
ENSPCIG00000003821	PRPF4	92	43.633	WBGene00007972	prp-4	96	43.633	Caenorhabditis_elegans
ENSPCIG00000003821	PRPF4	99	95.525	ENSCJAG00000017856	PRPF4	98	95.499	Callithrix_jacchus
ENSPCIG00000003821	PRPF4	99	95.136	ENSCAFG00000003224	PRPF4	96	95.136	Canis_familiaris
ENSPCIG00000003821	PRPF4	99	95.525	ENSCAFG00020022637	PRPF4	99	95.136	Canis_lupus_dingo
ENSPCIG00000003821	PRPF4	99	95.331	ENSCHIG00000024648	-	98	95.303	Capra_hircus
ENSPCIG00000003821	PRPF4	99	94.942	ENSTSYG00000010366	PRPF4	99	94.942	Carlito_syrichta
ENSPCIG00000003821	PRPF4	89	86.396	ENSCAPG00000008935	PRPF4	97	86.396	Cavia_aperea
ENSPCIG00000003821	PRPF4	99	94.358	ENSCPOG00000010747	-	99	94.358	Cavia_porcellus
ENSPCIG00000003821	PRPF4	99	89.105	ENSCPOG00000014729	-	99	89.105	Cavia_porcellus
ENSPCIG00000003821	PRPF4	99	95.331	ENSCCAG00000028990	PRPF4	99	95.331	Cebus_capucinus
ENSPCIG00000003821	PRPF4	98	96.245	ENSCATG00000021552	PRPF4	99	95.331	Cercocebus_atys
ENSPCIG00000003821	PRPF4	99	94.553	ENSCLAG00000013448	PRPF4	99	94.553	Chinchilla_lanigera
ENSPCIG00000003821	PRPF4	88	94.027	ENSCHOG00000007233	PRPF4	100	94.027	Choloepus_hoffmanni
ENSPCIG00000003821	PRPF4	98	92.079	ENSCPBG00000019136	PRPF4	73	92.079	Chrysemys_picta_bellii
ENSPCIG00000003821	PRPF4	95	60.362	ENSCING00000001299	-	95	59.717	Ciona_intestinalis
ENSPCIG00000003821	PRPF4	98	57.534	ENSCSAVG00000009178	-	99	59.307	Ciona_savignyi
ENSPCIG00000003821	PRPF4	99	95.136	ENSCANG00000003246	PRPF4	99	95.136	Colobus_angolensis_palliatus
ENSPCIG00000003821	PRPF4	99	95.136	ENSCGRG00001016992	Prpf4	99	95.136	Cricetulus_griseus_chok1gshd
ENSPCIG00000003821	PRPF4	99	95.136	ENSCGRG00000017560	Prpf4	99	95.136	Cricetulus_griseus_crigri
ENSPCIG00000003821	PRPF4	98	75.050	ENSCSEG00000020451	prpf4	99	75.050	Cynoglossus_semilaevis
ENSPCIG00000003821	PRPF4	98	80.000	ENSDARG00000067639	prpf4	99	80.000	Danio_rerio
ENSPCIG00000003821	PRPF4	99	95.136	ENSDNOG00000013203	PRPF4	98	95.136	Dasypus_novemcinctus
ENSPCIG00000003821	PRPF4	99	95.136	ENSDORG00000026275	Prpf4	99	95.136	Dipodomys_ordii
ENSPCIG00000003821	PRPF4	88	56.236	FBgn0036733	U4-U6-60K	99	49.818	Drosophila_melanogaster
ENSPCIG00000003821	PRPF4	99	94.163	ENSETEG00000020389	PRPF4	98	94.163	Echinops_telfairi
ENSPCIG00000003821	PRPF4	98	71.493	ENSEBUG00000015229	prpf4	88	71.946	Eptatretus_burgeri
ENSPCIG00000003821	PRPF4	99	95.136	ENSEASG00005022678	PRPF4	99	95.136	Equus_asinus_asinus
ENSPCIG00000003821	PRPF4	99	95.136	ENSECAG00000007072	PRPF4	99	95.136	Equus_caballus
ENSPCIG00000003821	PRPF4	99	75.056	ENSEEUG00000007480	PRPF4	100	72.574	Erinaceus_europaeus
ENSPCIG00000003821	PRPF4	98	80.396	ENSELUG00000007510	prpf4	99	80.396	Esox_lucius
ENSPCIG00000003821	PRPF4	99	95.525	ENSFCAG00000005514	PRPF4	98	95.499	Felis_catus
ENSPCIG00000003821	PRPF4	99	87.416	ENSFALG00000005423	PRPF4	86	87.416	Ficedula_albicollis
ENSPCIG00000003821	PRPF4	99	94.358	ENSFDAG00000005839	PRPF4	99	94.358	Fukomys_damarensis
ENSPCIG00000003821	PRPF4	98	74.753	ENSFHEG00000001300	prpf4	99	74.753	Fundulus_heteroclitus
ENSPCIG00000003821	PRPF4	99	89.628	ENSGALG00000008857	PRPF4	95	89.628	Gallus_gallus
ENSPCIG00000003821	PRPF4	63	71.166	ENSGAFG00000012164	prpf4	67	71.166	Gambusia_affinis
ENSPCIG00000003821	PRPF4	98	69.291	ENSGACG00000015476	prpf4	99	68.627	Gasterosteus_aculeatus
ENSPCIG00000003821	PRPF4	99	91.194	ENSGAGG00000025029	PRPF4	95	91.194	Gopherus_agassizii
ENSPCIG00000003821	PRPF4	99	94.942	ENSGGOG00000006943	PRPF4	99	94.942	Gorilla_gorilla
ENSPCIG00000003821	PRPF4	98	75.542	ENSHBUG00000000562	prpf4	99	75.246	Haplochromis_burtoni
ENSPCIG00000003821	PRPF4	99	77.519	ENSHGLG00000016628	-	100	76.438	Heterocephalus_glaber_female
ENSPCIG00000003821	PRPF4	99	94.358	ENSHGLG00000015191	PRPF4	99	94.358	Heterocephalus_glaber_female
ENSPCIG00000003821	PRPF4	100	76.505	ENSHGLG00000003838	-	98	76.505	Heterocephalus_glaber_female
ENSPCIG00000003821	PRPF4	100	76.505	ENSHGLG00100005571	-	98	76.505	Heterocephalus_glaber_male
ENSPCIG00000003821	PRPF4	98	78.614	ENSIPUG00000017956	PRPF4	99	78.614	Ictalurus_punctatus
ENSPCIG00000003821	PRPF4	99	94.553	ENSSTOG00000027833	PRPF4	99	94.553	Ictidomys_tridecemlineatus
ENSPCIG00000003821	PRPF4	99	94.942	ENSJJAG00000008838	Prpf4	99	94.942	Jaculus_jaculus
ENSPCIG00000003821	PRPF4	98	75.345	ENSKMAG00000013236	prpf4	99	75.345	Kryptolebias_marmoratus
ENSPCIG00000003821	PRPF4	98	75.248	ENSLBEG00000020611	prpf4	99	74.951	Labrus_bergylta
ENSPCIG00000003821	PRPF4	100	79.691	ENSLACG00000016317	PRPF4	99	79.691	Latimeria_chalumnae
ENSPCIG00000003821	PRPF4	97	81.600	ENSLOCG00000000581	prpf4	99	81.600	Lepisosteus_oculatus
ENSPCIG00000003821	PRPF4	99	95.525	ENSLAFG00000018225	PRPF4	98	95.525	Loxodonta_africana
ENSPCIG00000003821	PRPF4	98	96.047	ENSMFAG00000039397	PRPF4	99	95.136	Macaca_fascicularis
ENSPCIG00000003821	PRPF4	98	96.245	ENSMMUG00000005844	PRPF4	99	95.331	Macaca_mulatta
ENSPCIG00000003821	PRPF4	98	85.771	ENSMNEG00000033737	PRPF4	99	85.019	Macaca_nemestrina
ENSPCIG00000003821	PRPF4	98	96.245	ENSMLEG00000040284	PRPF4	99	95.331	Mandrillus_leucophaeus
ENSPCIG00000003821	PRPF4	98	75.345	ENSMAMG00000020141	prpf4	99	75.049	Mastacembelus_armatus
ENSPCIG00000003821	PRPF4	98	75.740	ENSMZEG00005023205	prpf4	99	75.442	Maylandia_zebra
ENSPCIG00000003821	PRPF4	99	89.194	ENSMGAG00000001796	PRPF4	95	89.194	Meleagris_gallopavo
ENSPCIG00000003821	PRPF4	99	95.481	ENSMAUG00000018022	Prpf4	99	94.747	Mesocricetus_auratus
ENSPCIG00000003821	PRPF4	99	94.892	ENSMICG00000015022	PRPF4	98	94.892	Microcebus_murinus
ENSPCIG00000003821	PRPF4	99	94.747	ENSMOCG00000018273	Prpf4	99	94.747	Microtus_ochrogaster
ENSPCIG00000003821	PRPF4	98	73.964	ENSMMOG00000021177	prpf4	99	73.964	Mola_mola
ENSPCIG00000003821	PRPF4	99	99.027	ENSMODG00000025096	-	95	99.027	Monodelphis_domestica
ENSPCIG00000003821	PRPF4	99	98.833	ENSMODG00000004444	-	98	98.833	Monodelphis_domestica
ENSPCIG00000003821	PRPF4	98	75.740	ENSMALG00000013624	prpf4	99	75.442	Monopterus_albus
ENSPCIG00000003821	PRPF4	99	95.136	MGP_CAROLIEiJ_G0026078	Prpf4	99	95.136	Mus_caroli
ENSPCIG00000003821	PRPF4	99	95.136	ENSMUSG00000066148	Prpf4	99	95.136	Mus_musculus
ENSPCIG00000003821	PRPF4	99	94.942	MGP_PahariEiJ_G0028413	Prpf4	99	94.942	Mus_pahari
ENSPCIG00000003821	PRPF4	99	95.136	MGP_SPRETEiJ_G0027042	Prpf4	99	95.136	Mus_spretus
ENSPCIG00000003821	PRPF4	99	95.136	ENSMPUG00000007883	PRPF4	99	95.136	Mustela_putorius_furo
ENSPCIG00000003821	PRPF4	99	93.191	ENSMLUG00000008626	-	96	93.191	Myotis_lucifugus
ENSPCIG00000003821	PRPF4	99	94.942	ENSMLUG00000015309	-	96	94.942	Myotis_lucifugus
ENSPCIG00000003821	PRPF4	99	89.494	ENSNGAG00000000468	Prpf4	99	89.494	Nannospalax_galili
ENSPCIG00000003821	PRPF4	98	75.937	ENSNBRG00000007972	prpf4	99	75.639	Neolamprologus_brichardi
ENSPCIG00000003821	PRPF4	99	95.136	ENSNLEG00000016647	PRPF4	99	95.136	Nomascus_leucogenys
ENSPCIG00000003821	PRPF4	99	99.611	ENSMEUG00000013256	PRPF4	100	99.611	Notamacropus_eugenii
ENSPCIG00000003821	PRPF4	99	95.136	ENSOPRG00000005302	PRPF4	98	95.108	Ochotona_princeps
ENSPCIG00000003821	PRPF4	99	94.747	ENSODEG00000018147	PRPF4	99	94.747	Octodon_degus
ENSPCIG00000003821	PRPF4	99	74.903	ENSONIG00000012671	prpf4	99	75.740	Oreochromis_niloticus
ENSPCIG00000003821	PRPF4	99	95.331	ENSOCUG00000005046	PRPF4	99	95.331	Oryctolagus_cuniculus
ENSPCIG00000003821	PRPF4	98	74.455	ENSORLG00000019641	prpf4	99	74.162	Oryzias_latipes
ENSPCIG00000003821	PRPF4	98	74.455	ENSORLG00020019438	prpf4	99	74.162	Oryzias_latipes_hni
ENSPCIG00000003821	PRPF4	98	74.268	ENSOMEG00000020941	prpf4	99	73.958	Oryzias_melastigma
ENSPCIG00000003821	PRPF4	99	90.272	ENSOGAG00000007802	PRPF4	96	90.272	Otolemur_garnettii
ENSPCIG00000003821	PRPF4	99	94.942	ENSOARG00000006319	PRPF4	95	94.942	Ovis_aries
ENSPCIG00000003821	PRPF4	99	94.942	ENSPPAG00000041797	PRPF4	99	94.942	Pan_paniscus
ENSPCIG00000003821	PRPF4	99	95.136	ENSPPRG00000014360	PRPF4	99	95.136	Panthera_pardus
ENSPCIG00000003821	PRPF4	99	95.136	ENSPTIG00000009574	PRPF4	99	95.136	Panthera_tigris_altaica
ENSPCIG00000003821	PRPF4	99	95.331	ENSPTRG00000021274	PRPF4	98	95.303	Pan_troglodytes
ENSPCIG00000003821	PRPF4	98	96.047	ENSPANG00000025776	PRPF4	95	95.136	Papio_anubis
ENSPCIG00000003821	PRPF4	98	80.990	ENSPKIG00000017259	prpf4	99	80.990	Paramormyrops_kingsleyae
ENSPCIG00000003821	PRPF4	100	89.903	ENSPSIG00000010713	PRPF4	91	89.903	Pelodiscus_sinensis
ENSPCIG00000003821	PRPF4	99	58.716	ENSPMGG00000000997	prpf4	98	58.692	Periophthalmus_magnuspinnatus
ENSPCIG00000003821	PRPF4	99	95.136	ENSPEMG00000024115	Prpf4	99	95.136	Peromyscus_maniculatus_bairdii
ENSPCIG00000003821	PRPF4	98	68.689	ENSPFOG00000013524	prpf4	99	70.859	Poecilia_formosa
ENSPCIG00000003821	PRPF4	83	70.642	ENSPLAG00000011620	prpf4	97	70.279	Poecilia_latipinna
ENSPCIG00000003821	PRPF4	93	72.024	ENSPMEG00000006813	prpf4	99	72.024	Poecilia_mexicana
ENSPCIG00000003821	PRPF4	99	95.331	ENSPCAG00000002561	PRPF4	99	95.331	Procavia_capensis
ENSPCIG00000003821	PRPF4	99	95.285	ENSPCOG00000011975	PRPF4	99	94.553	Propithecus_coquereli
ENSPCIG00000003821	PRPF4	99	91.977	ENSPVAG00000004708	PRPF4	98	91.977	Pteropus_vampyrus
ENSPCIG00000003821	PRPF4	98	75.740	ENSPNYG00000008013	prpf4	99	75.442	Pundamilia_nyererei
ENSPCIG00000003821	PRPF4	98	80.198	ENSPNAG00000000697	prpf4	99	80.198	Pygocentrus_nattereri
ENSPCIG00000003821	PRPF4	99	94.942	ENSRNOG00000014777	Prpf4	99	94.942	Rattus_norvegicus
ENSPCIG00000003821	PRPF4	99	95.136	ENSRBIG00000040221	PRPF4	99	95.136	Rhinopithecus_bieti
ENSPCIG00000003821	PRPF4	99	95.136	ENSRROG00000040240	PRPF4	99	95.136	Rhinopithecus_roxellana
ENSPCIG00000003821	PRPF4	99	99.805	ENSSHAG00000017658	PRPF4	98	99.805	Sarcophilus_harrisii
ENSPCIG00000003821	PRPF4	97	82.800	ENSSFOG00015008963	prpf4	99	82.800	Scleropages_formosus
ENSPCIG00000003821	PRPF4	98	74.656	ENSSMAG00000008889	prpf4	99	74.656	Scophthalmus_maximus
ENSPCIG00000003821	PRPF4	98	72.387	ENSSDUG00000022083	prpf4	99	72.781	Seriola_dumerili
ENSPCIG00000003821	PRPF4	98	72.584	ENSSLDG00000008115	prpf4	99	72.978	Seriola_lalandi_dorsalis
ENSPCIG00000003821	PRPF4	99	90.766	ENSSPUG00000015582	PRPF4	98	90.766	Sphenodon_punctatus
ENSPCIG00000003821	PRPF4	98	70.392	ENSSPAG00000011286	prpf4	99	70.117	Stegastes_partitus
ENSPCIG00000003821	PRPF4	99	95.136	ENSSSCG00000024648	PRPF4	99	95.136	Sus_scrofa
ENSPCIG00000003821	PRPF4	96	90.061	ENSTGUG00000002623	PRPF4	100	90.389	Taeniopygia_guttata
ENSPCIG00000003821	PRPF4	97	75.050	ENSTRUG00000008853	prpf4	98	75.050	Takifugu_rubripes
ENSPCIG00000003821	PRPF4	97	74.451	ENSTNIG00000013250	prpf4	99	74.451	Tetraodon_nigroviridis
ENSPCIG00000003821	PRPF4	99	86.693	ENSTBEG00000000821	PRPF4	98	86.693	Tupaia_belangeri
ENSPCIG00000003821	PRPF4	83	98.837	ENSTTRG00000003246	PRPF4	85	98.837	Tursiops_truncatus
ENSPCIG00000003821	PRPF4	64	89.908	ENSUAMG00000018288	PRPF4	90	89.342	Ursus_americanus
ENSPCIG00000003821	PRPF4	99	94.553	ENSUMAG00000019375	PRPF4	99	94.553	Ursus_maritimus
ENSPCIG00000003821	PRPF4	99	95.303	ENSVPAG00000005281	PRPF4	98	95.303	Vicugna_pacos
ENSPCIG00000003821	PRPF4	99	94.015	ENSVVUG00000002476	PRPF4	99	95.644	Vulpes_vulpes
ENSPCIG00000003821	PRPF4	70	57.222	ENSXCOG00000006101	prpf4	93	58.621	Xiphophorus_couchianus
ENSPCIG00000003821	PRPF4	89	62.771	ENSXMAG00000002750	prpf4	99	63.905	Xiphophorus_maculatus