EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000003926 (Gene tree)
Gene ID: 110210774
Gene Symbol: SMARCA5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 46467 bases
Position: chrFUWB01000044.1:441026-487492
Accession: 11101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000004771	ResIII	PF04851.15	4e-11	1	1
ENSPCIP00000004755	ResIII	PF04851.15	4.1e-11	1	1
ENSPCIP00000004771	DEAD	PF00270.29	1.8e-06	1	1
ENSPCIP00000004755	DEAD	PF00270.29	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000005944	SMARCA5-201	3389	-	ENSPCIP00000004755	1048 (aa)	-	-
ENSPCIT00000005980	SMARCA5-203	3209	-	ENSPCIP00000004782	988 (aa)	-	-
ENSPCIT00000005965	SMARCA5-202	3281	-	ENSPCIP00000004771	1012 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000003926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000003926's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000003926	SMARCA5	94	86.834	ENSPCIG00000015460	SMARCA1	95	88.912
ENSPCIG00000003926	SMARCA5	50	47.200	ENSPCIG00000013361	HELLS	64	47.200
ENSPCIG00000003926	SMARCA5	53	42.210	ENSPCIG00000030409	CHD1L	63	42.672

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000003926	SMARCA5	98	96.318	ENSG00000153147	SMARCA5	100	95.459	Homo_sapiens
ENSPCIG00000003926	SMARCA5	95	99.098	ENSAMEG00000009585	SMARCA5	100	95.553	Ailuropoda_melanoleuca
ENSPCIG00000003926	SMARCA5	92	97.433	ENSAPLG00000009206	SMARCA5	100	97.433	Anas_platyrhynchos
ENSPCIG00000003926	SMARCA5	95	97.180	ENSACAG00000003038	SMARCA5	98	94.288	Anolis_carolinensis
ENSPCIG00000003926	SMARCA5	98	96.702	ENSANAG00000019345	SMARCA5	99	98.695	Aotus_nancymaae
ENSPCIG00000003926	SMARCA5	98	96.705	ENSBTAG00000003399	SMARCA5	99	96.246	Bos_taurus
ENSPCIG00000003926	SMARCA5	95	98.996	ENSCJAG00000002735	SMARCA5	100	95.648	Callithrix_jacchus
ENSPCIG00000003926	SMARCA5	97	97.544	ENSCAFG00000007525	SMARCA5	100	95.924	Canis_familiaris
ENSPCIG00000003926	SMARCA5	95	97.495	ENSCAFG00020025641	SMARCA5	99	95.564	Canis_lupus_dingo
ENSPCIG00000003926	SMARCA5	97	97.544	ENSCHIG00000013730	-	99	96.246	Capra_hircus
ENSPCIG00000003926	SMARCA5	100	94.418	ENSCHIG00000016375	-	100	94.418	Capra_hircus
ENSPCIG00000003926	SMARCA5	98	96.595	ENSTSYG00000009954	SMARCA5	99	99.193	Carlito_syrichta
ENSPCIG00000003926	SMARCA5	92	98.657	ENSCAPG00000013747	SMARCA5	95	98.657	Cavia_aperea
ENSPCIG00000003926	SMARCA5	98	96.325	ENSCPOG00000002259	SMARCA5	99	96.146	Cavia_porcellus
ENSPCIG00000003926	SMARCA5	95	98.996	ENSCCAG00000027215	SMARCA5	99	98.795	Cebus_capucinus
ENSPCIG00000003926	SMARCA5	98	96.799	ENSCATG00000044917	SMARCA5	100	95.553	Cercocebus_atys
ENSPCIG00000003926	SMARCA5	95	98.892	ENSCLAG00000006153	SMARCA5	100	98.892	Chinchilla_lanigera
ENSPCIG00000003926	SMARCA5	92	99.071	ENSCSAG00000003448	SMARCA5	100	99.071	Chlorocebus_sabaeus
ENSPCIG00000003926	SMARCA5	89	98.064	ENSCHOG00000011724	SMARCA5	91	98.064	Choloepus_hoffmanni
ENSPCIG00000003926	SMARCA5	95	98.696	ENSCPBG00000027535	SMARCA5	99	96.415	Chrysemys_picta_bellii
ENSPCIG00000003926	SMARCA5	98	96.702	ENSCANG00000041629	SMARCA5	100	95.364	Colobus_angolensis_palliatus
ENSPCIG00000003926	SMARCA5	99	95.743	ENSCGRG00001012719	Smarca5	99	95.743	Cricetulus_griseus_chok1gshd
ENSPCIG00000003926	SMARCA5	95	98.993	ENSCGRG00000001417	Smarca5	99	98.993	Cricetulus_griseus_crigri
ENSPCIG00000003926	SMARCA5	98	93.992	ENSDNOG00000009158	SMARCA5	100	92.810	Dasypus_novemcinctus
ENSPCIG00000003926	SMARCA5	91	89.760	ENSDORG00000003466	Smarca5	97	90.506	Dipodomys_ordii
ENSPCIG00000003926	SMARCA5	92	85.730	ENSEBUG00000014773	SMARCA5	96	85.640	Eptatretus_burgeri
ENSPCIG00000003926	SMARCA5	100	94.513	ENSEASG00005001866	SMARCA5	98	99.152	Equus_asinus_asinus
ENSPCIG00000003926	SMARCA5	95	99.098	ENSECAG00000002676	SMARCA5	100	95.837	Equus_caballus
ENSPCIG00000003926	SMARCA5	95	94.663	ENSEEUG00000013176	SMARCA5	100	94.663	Erinaceus_europaeus
ENSPCIG00000003926	SMARCA5	92	89.381	ENSELUG00000014653	SMARCA5	99	89.381	Esox_lucius
ENSPCIG00000003926	SMARCA5	95	99.098	ENSFCAG00000004544	SMARCA5	100	95.648	Felis_catus
ENSPCIG00000003926	SMARCA5	92	97.835	ENSFALG00000004987	SMARCA5	100	97.835	Ficedula_albicollis
ENSPCIG00000003926	SMARCA5	96	98.601	ENSFDAG00000021016	SMARCA5	100	99.094	Fukomys_damarensis
ENSPCIG00000003926	SMARCA5	96	87.438	ENSGMOG00000007519	SMARCA5	94	89.662	Gadus_morhua
ENSPCIG00000003926	SMARCA5	97	96.853	ENSGALG00000009913	SMARCA5	98	96.390	Gallus_gallus
ENSPCIG00000003926	SMARCA5	97	87.917	ENSGACG00000017238	SMARCA5	95	90.788	Gasterosteus_aculeatus
ENSPCIG00000003926	SMARCA5	96	97.927	ENSGAGG00000019882	SMARCA5	99	96.887	Gopherus_agassizii
ENSPCIG00000003926	SMARCA5	98	96.318	ENSGGOG00000012595	SMARCA5	99	98.892	Gorilla_gorilla
ENSPCIG00000003926	SMARCA5	96	88.867	ENSHGLG00000000317	-	95	89.089	Heterocephalus_glaber_female
ENSPCIG00000003926	SMARCA5	95	98.898	ENSHGLG00000000816	-	99	96.243	Heterocephalus_glaber_female
ENSPCIG00000003926	SMARCA5	96	98.014	ENSHGLG00100018421	-	100	98.993	Heterocephalus_glaber_male
ENSPCIG00000003926	SMARCA5	100	96.219	ENSSTOG00000010683	SMARCA5	99	96.219	Ictidomys_tridecemlineatus
ENSPCIG00000003926	SMARCA5	95	98.599	ENSJJAG00000014965	Smarca5	100	95.632	Jaculus_jaculus
ENSPCIG00000003926	SMARCA5	94	95.863	ENSLACG00000007091	SMARCA5	97	95.863	Latimeria_chalumnae
ENSPCIG00000003926	SMARCA5	94	92.386	ENSLOCG00000008966	SMARCA5	96	92.386	Lepisosteus_oculatus
ENSPCIG00000003926	SMARCA5	95	99.098	ENSLAFG00000007795	SMARCA5	100	95.932	Loxodonta_africana
ENSPCIG00000003926	SMARCA5	98	96.799	ENSMFAG00000043649	SMARCA5	100	95.553	Macaca_fascicularis
ENSPCIG00000003926	SMARCA5	98	96.799	ENSMMUG00000000829	SMARCA5	97	99.051	Macaca_mulatta
ENSPCIG00000003926	SMARCA5	98	96.799	ENSMNEG00000031916	SMARCA5	100	95.553	Macaca_nemestrina
ENSPCIG00000003926	SMARCA5	98	96.799	ENSMLEG00000042393	SMARCA5	100	95.553	Mandrillus_leucophaeus
ENSPCIG00000003926	SMARCA5	95	97.798	ENSMGAG00000003517	SMARCA5	99	97.798	Meleagris_gallopavo
ENSPCIG00000003926	SMARCA5	95	99.094	ENSMAUG00000015902	Smarca5	98	99.094	Mesocricetus_auratus
ENSPCIG00000003926	SMARCA5	95	98.899	ENSMICG00000003971	SMARCA5	99	97.397	Microcebus_murinus
ENSPCIG00000003926	SMARCA5	99	95.224	ENSMOCG00000016986	-	99	96.146	Microtus_ochrogaster
ENSPCIG00000003926	SMARCA5	100	98.859	ENSMODG00000000391	SMARCA5	100	98.859	Monodelphis_domestica
ENSPCIG00000003926	SMARCA5	96	98.113	ENSMUSG00000031715	Smarca5	99	95.857	Mus_musculus
ENSPCIG00000003926	SMARCA5	96	98.312	MGP_PahariEiJ_G0022862	Smarca5	99	96.050	Mus_pahari
ENSPCIG00000003926	SMARCA5	95	99.198	ENSMLUG00000000468	SMARCA5	100	95.932	Myotis_lucifugus
ENSPCIG00000003926	SMARCA5	97	96.705	ENSNGAG00000000441	Smarca5	100	95.549	Nannospalax_galili
ENSPCIG00000003926	SMARCA5	98	96.799	ENSNLEG00000005383	SMARCA5	100	95.553	Nomascus_leucogenys
ENSPCIG00000003926	SMARCA5	92	92.045	ENSMEUG00000001267	SMARCA5	100	92.045	Notamacropus_eugenii
ENSPCIG00000003926	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSPCIG00000003926	SMARCA5	92	99.897	ENSOANG00000013921	SMARCA5	100	99.897	Ornithorhynchus_anatinus
ENSPCIG00000003926	SMARCA5	92	99.278	ENSOCUG00000013042	SMARCA5	100	99.278	Oryctolagus_cuniculus
ENSPCIG00000003926	SMARCA5	95	98.899	ENSOGAG00000009702	SMARCA5	100	95.459	Otolemur_garnettii
ENSPCIG00000003926	SMARCA5	96	97.446	ENSOARG00000010589	SMARCA5	98	96.050	Ovis_aries
ENSPCIG00000003926	SMARCA5	98	96.221	ENSPPAG00000028523	SMARCA5	99	98.792	Pan_paniscus
ENSPCIG00000003926	SMARCA5	100	90.539	ENSPPRG00000004925	SMARCA5	100	91.391	Panthera_pardus
ENSPCIG00000003926	SMARCA5	96	98.317	ENSPTIG00000020959	SMARCA5	97	98.317	Panthera_tigris_altaica
ENSPCIG00000003926	SMARCA5	98	96.318	ENSPTRG00000016472	SMARCA5	99	98.892	Pan_troglodytes
ENSPCIG00000003926	SMARCA5	98	96.799	ENSPANG00000001175	SMARCA5	100	95.553	Papio_anubis
ENSPCIG00000003926	SMARCA5	95	89.621	ENSPKIG00000015885	SMARCA5	100	91.649	Paramormyrops_kingsleyae
ENSPCIG00000003926	SMARCA5	93	91.086	ENSPKIG00000015699	SMARCA5	98	90.071	Paramormyrops_kingsleyae
ENSPCIG00000003926	SMARCA5	95	96.389	ENSPSIG00000004177	SMARCA5	100	96.389	Pelodiscus_sinensis
ENSPCIG00000003926	SMARCA5	92	90.432	ENSPMGG00000012316	SMARCA5	100	90.432	Periophthalmus_magnuspinnatus
ENSPCIG00000003926	SMARCA5	97	97.250	ENSPEMG00000008060	Smarca5	99	97.250	Peromyscus_maniculatus_bairdii
ENSPCIG00000003926	SMARCA5	63	86.583	ENSPMAG00000008026	SMARCA5	99	86.583	Petromyzon_marinus
ENSPCIG00000003926	SMARCA5	96	69.617	ENSPMAG00000006011	SMARCA5	81	85.440	Petromyzon_marinus
ENSPCIG00000003926	SMARCA5	98	96.799	ENSPPYG00000015091	SMARCA5	100	95.648	Pongo_abelii
ENSPCIG00000003926	SMARCA5	88	88.571	ENSPCAG00000014230	SMARCA5	92	87.373	Procavia_capensis
ENSPCIG00000003926	SMARCA5	100	93.377	ENSPCOG00000026744	SMARCA5	99	95.674	Propithecus_coquereli
ENSPCIG00000003926	SMARCA5	97	97.168	ENSPVAG00000006482	SMARCA5	99	96.435	Pteropus_vampyrus
ENSPCIG00000003926	SMARCA5	96	88.878	ENSPNAG00000027824	SMARCA5	97	90.664	Pygocentrus_nattereri
ENSPCIG00000003926	SMARCA5	95	98.894	ENSRNOG00000018149	Smarca5	100	98.894	Rattus_norvegicus
ENSPCIG00000003926	SMARCA5	98	96.415	ENSRBIG00000044644	SMARCA5	100	95.369	Rhinopithecus_bieti
ENSPCIG00000003926	SMARCA5	95	98.893	ENSRROG00000029591	SMARCA5	99	98.893	Rhinopithecus_roxellana
ENSPCIG00000003926	SMARCA5	97	97.079	ENSSBOG00000036257	SMARCA5	100	95.837	Saimiri_boliviensis_boliviensis
ENSPCIG00000003926	SMARCA5	95	100.000	ENSSHAG00000008464	SMARCA5	100	100.000	Sarcophilus_harrisii
ENSPCIG00000003926	SMARCA5	94	90.983	ENSSFOG00015013252	SMARCA5	98	89.861	Scleropages_formosus
ENSPCIG00000003926	SMARCA5	98	94.363	ENSSPUG00000007604	SMARCA5	99	96.970	Sphenodon_punctatus
ENSPCIG00000003926	SMARCA5	98	96.609	ENSSSCG00000009047	SMARCA5	99	96.535	Sus_scrofa
ENSPCIG00000003926	SMARCA5	96	96.425	ENSTGUG00000002408	SMARCA5	99	96.425	Taeniopygia_guttata
ENSPCIG00000003926	SMARCA5	94	98.523	ENSUAMG00000023495	SMARCA5	99	95.468	Ursus_americanus
ENSPCIG00000003926	SMARCA5	96	98.705	ENSUMAG00000015324	SMARCA5	97	98.705	Ursus_maritimus
ENSPCIG00000003926	SMARCA5	95	98.798	ENSVPAG00000008982	SMARCA5	99	96.054	Vicugna_pacos
ENSPCIG00000003926	SMARCA5	97	97.544	ENSVVUG00000017473	SMARCA5	100	95.648	Vulpes_vulpes
ENSPCIG00000003926	SMARCA5	98	89.738	ENSXETG00000017566	smarca5	95	93.644	Xenopus_tropicalis