EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000004222 (Gene tree)
Gene ID: 110196310
Gene Symbol: POLR1A
Alias: -
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 79546 bases
Position: chrFUWB01000646.1:561346-640891
Accession: 17264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000005100	RNA_pol_Rpb1_5	PF04998.17	1e-88	1	1
ENSPCIP00000005100	RNA_pol_Rpb1_4	PF05000.17	8.2e-25	1	1
ENSPCIP00000005100	RNA_pol_Rpb1_2	PF00623.20	3.4e-70	1	1
ENSPCIP00000005100	RNA_pol_Rpb1_3	PF04983.18	6.9e-37	1	1
ENSPCIP00000005100	RNA_pol_Rpb1_1	PF04997.12	1.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000006390	POLR1A-201	6111	-	ENSPCIP00000005100	1638 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000004222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000004222's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000004222	POLR1A	63	33.333	ENSPCIG00000028851	-	51	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000004222	POLR1A	99	78.480	ENSG00000068654	POLR1A	95	79.101	Homo_sapiens
ENSPCIG00000004222	POLR1A	73	67.500	ENSAPOG00000017945	polr1a	99	67.750	Acanthochromis_polyacanthus
ENSPCIG00000004222	POLR1A	99	79.281	ENSAMEG00000005807	POLR1A	100	82.909	Ailuropoda_melanoleuca
ENSPCIG00000004222	POLR1A	95	66.372	ENSACIG00000022147	polr1a	95	65.784	Amphilophus_citrinellus
ENSPCIG00000004222	POLR1A	99	65.326	ENSAOCG00000017336	polr1a	94	67.269	Amphiprion_ocellaris
ENSPCIG00000004222	POLR1A	92	72.917	ENSAPEG00000016105	polr1a	92	72.917	Amphiprion_percula
ENSPCIG00000004222	POLR1A	99	64.656	ENSATEG00000016773	polr1a	95	65.284	Anabas_testudineus
ENSPCIG00000004222	POLR1A	84	72.434	ENSAPLG00000013871	POLR1A	94	72.538	Anas_platyrhynchos
ENSPCIG00000004222	POLR1A	99	68.800	ENSACAG00000012141	POLR1A	95	68.598	Anolis_carolinensis
ENSPCIG00000004222	POLR1A	99	78.954	ENSANAG00000033927	POLR1A	95	78.845	Aotus_nancymaae
ENSPCIG00000004222	POLR1A	99	60.242	ENSACLG00000020541	polr1a	95	60.597	Astatotilapia_calliptera
ENSPCIG00000004222	POLR1A	99	78.698	ENSBTAG00000006481	POLR1A	95	78.758	Bos_taurus
ENSPCIG00000004222	POLR1A	99	37.854	WBGene00012999	rpoa-1	93	37.692	Caenorhabditis_elegans
ENSPCIG00000004222	POLR1A	99	78.663	ENSCJAG00000019547	POLR1A	95	78.493	Callithrix_jacchus
ENSPCIG00000004222	POLR1A	99	79.245	ENSCAFG00000007613	POLR1A	95	79.197	Canis_familiaris
ENSPCIG00000004222	POLR1A	99	79.245	ENSCAFG00020014752	POLR1A	95	83.474	Canis_lupus_dingo
ENSPCIG00000004222	POLR1A	99	78.690	ENSCHIG00000018204	POLR1A	99	78.535	Capra_hircus
ENSPCIG00000004222	POLR1A	99	77.555	ENSTSYG00000002761	POLR1A	95	77.771	Carlito_syrichta
ENSPCIG00000004222	POLR1A	97	74.329	ENSCAPG00000010132	POLR1A	95	74.969	Cavia_aperea
ENSPCIG00000004222	POLR1A	99	79.075	ENSCPOG00000012350	POLR1A	95	79.462	Cavia_porcellus
ENSPCIG00000004222	POLR1A	99	78.419	ENSCCAG00000019839	POLR1A	95	78.736	Cebus_capucinus
ENSPCIG00000004222	POLR1A	99	78.663	ENSCATG00000029786	POLR1A	95	79.405	Cercocebus_atys
ENSPCIG00000004222	POLR1A	99	78.359	ENSCLAG00000005187	POLR1A	95	78.646	Chinchilla_lanigera
ENSPCIG00000004222	POLR1A	99	79.514	ENSCSAG00000016251	POLR1A	95	79.356	Chlorocebus_sabaeus
ENSPCIG00000004222	POLR1A	51	87.059	ENSCHOG00000003766	-	84	87.059	Choloepus_hoffmanni
ENSPCIG00000004222	POLR1A	99	74.527	ENSCPBG00000001115	POLR1A	97	74.985	Chrysemys_picta_bellii
ENSPCIG00000004222	POLR1A	99	45.622	ENSCSAVG00000007184	-	95	45.487	Ciona_savignyi
ENSPCIG00000004222	POLR1A	99	76.549	ENSCANG00000031785	POLR1A	95	76.274	Colobus_angolensis_palliatus
ENSPCIG00000004222	POLR1A	95	81.319	ENSCGRG00001006651	Polr1a	95	81.319	Cricetulus_griseus_chok1gshd
ENSPCIG00000004222	POLR1A	57	77.079	ENSCGRG00000010834	Polr1a	92	77.079	Cricetulus_griseus_crigri
ENSPCIG00000004222	POLR1A	99	60.552	ENSCSEG00000020190	polr1a	95	60.220	Cynoglossus_semilaevis
ENSPCIG00000004222	POLR1A	99	62.983	ENSCVAG00000020941	polr1a	95	63.289	Cyprinodon_variegatus
ENSPCIG00000004222	POLR1A	99	66.239	ENSDARG00000098375	polr1a	95	65.692	Danio_rerio
ENSPCIG00000004222	POLR1A	99	77.054	ENSDNOG00000010829	POLR1A	95	77.181	Dasypus_novemcinctus
ENSPCIG00000004222	POLR1A	99	78.771	ENSDORG00000008298	Polr1a	95	78.650	Dipodomys_ordii
ENSPCIG00000004222	POLR1A	83	43.497	FBgn0019938	RpI1	94	41.194	Drosophila_melanogaster
ENSPCIG00000004222	POLR1A	73	79.781	ENSETEG00000000412	-	70	79.781	Echinops_telfairi
ENSPCIG00000004222	POLR1A	84	60.465	ENSEBUG00000005667	-	86	60.465	Eptatretus_burgeri
ENSPCIG00000004222	POLR1A	99	79.149	ENSEASG00005001625	POLR1A	95	79.283	Equus_asinus_asinus
ENSPCIG00000004222	POLR1A	99	79.331	ENSECAG00000036306	-	95	83.265	Equus_caballus
ENSPCIG00000004222	POLR1A	99	79.331	ENSECAG00000010092	POLR1A	95	83.265	Equus_caballus
ENSPCIG00000004222	POLR1A	95	88.372	ENSECAG00000030510	-	95	88.372	Equus_caballus
ENSPCIG00000004222	POLR1A	79	87.500	ENSEEUG00000000676	POLR1A	76	87.500	Erinaceus_europaeus
ENSPCIG00000004222	POLR1A	99	66.159	ENSELUG00000012769	polr1a	94	66.870	Esox_lucius
ENSPCIG00000004222	POLR1A	99	78.941	ENSFCAG00000008966	POLR1A	95	79.562	Felis_catus
ENSPCIG00000004222	POLR1A	98	70.332	ENSFALG00000010082	POLR1A	95	70.592	Ficedula_albicollis
ENSPCIG00000004222	POLR1A	99	79.352	ENSFDAG00000013726	POLR1A	95	79.230	Fukomys_damarensis
ENSPCIG00000004222	POLR1A	99	61.074	ENSFHEG00000005996	polr1a	95	60.920	Fundulus_heteroclitus
ENSPCIG00000004222	POLR1A	99	59.423	ENSGMOG00000002230	polr1a	94	59.791	Gadus_morhua
ENSPCIG00000004222	POLR1A	94	69.968	ENSGALG00000038160	-	99	70.660	Gallus_gallus
ENSPCIG00000004222	POLR1A	99	63.331	ENSGAFG00000015266	polr1a	95	62.782	Gambusia_affinis
ENSPCIG00000004222	POLR1A	99	63.598	ENSGACG00000018791	polr1a	95	63.718	Gasterosteus_aculeatus
ENSPCIG00000004222	POLR1A	88	75.086	ENSGAGG00000004984	-	95	80.653	Gopherus_agassizii
ENSPCIG00000004222	POLR1A	99	78.359	ENSGGOG00000001788	POLR1A	95	78.979	Gorilla_gorilla
ENSPCIG00000004222	POLR1A	89	63.808	ENSHBUG00000020021	polr1a	91	63.808	Haplochromis_burtoni
ENSPCIG00000004222	POLR1A	99	79.245	ENSHGLG00000006334	POLR1A	95	79.645	Heterocephalus_glaber_female
ENSPCIG00000004222	POLR1A	99	79.005	ENSHGLG00100006614	POLR1A	95	79.403	Heterocephalus_glaber_male
ENSPCIG00000004222	POLR1A	99	61.844	ENSHCOG00000003345	polr1a	95	61.707	Hippocampus_comes
ENSPCIG00000004222	POLR1A	99	65.583	ENSIPUG00000013174	polr1a	95	65.378	Ictalurus_punctatus
ENSPCIG00000004222	POLR1A	99	78.383	ENSSTOG00000012580	POLR1A	95	78.458	Ictidomys_tridecemlineatus
ENSPCIG00000004222	POLR1A	99	79.243	ENSJJAG00000013113	Polr1a	95	79.243	Jaculus_jaculus
ENSPCIG00000004222	POLR1A	99	64.421	ENSKMAG00000007399	polr1a	95	64.207	Kryptolebias_marmoratus
ENSPCIG00000004222	POLR1A	93	67.313	ENSLBEG00000015401	polr1a	93	67.463	Labrus_bergylta
ENSPCIG00000004222	POLR1A	56	75.974	ENSLACG00000003218	polr1a	100	75.974	Latimeria_chalumnae
ENSPCIG00000004222	POLR1A	99	69.573	ENSLOCG00000010881	polr1a	95	69.451	Lepisosteus_oculatus
ENSPCIG00000004222	POLR1A	99	79.034	ENSLAFG00000014948	POLR1A	95	79.598	Loxodonta_africana
ENSPCIG00000004222	POLR1A	99	78.784	ENSMFAG00000046097	POLR1A	95	79.526	Macaca_fascicularis
ENSPCIG00000004222	POLR1A	99	78.845	ENSMMUG00000015815	POLR1A	95	79.587	Macaca_mulatta
ENSPCIG00000004222	POLR1A	99	78.784	ENSMNEG00000043313	POLR1A	95	79.526	Macaca_nemestrina
ENSPCIG00000004222	POLR1A	99	79.088	ENSMLEG00000042428	POLR1A	95	79.040	Mandrillus_leucophaeus
ENSPCIG00000004222	POLR1A	99	64.530	ENSMAMG00000016565	polr1a	95	65.217	Mastacembelus_armatus
ENSPCIG00000004222	POLR1A	99	64.338	ENSMZEG00005004915	polr1a	95	64.530	Maylandia_zebra
ENSPCIG00000004222	POLR1A	99	68.427	ENSMGAG00000013111	POLR1A	95	69.077	Meleagris_gallopavo
ENSPCIG00000004222	POLR1A	90	79.518	ENSMAUG00000008497	Polr1a	94	79.451	Mesocricetus_auratus
ENSPCIG00000004222	POLR1A	99	79.200	ENSMICG00000000757	POLR1A	95	79.260	Microcebus_murinus
ENSPCIG00000004222	POLR1A	99	79.060	ENSMOCG00000000122	Polr1a	95	79.182	Microtus_ochrogaster
ENSPCIG00000004222	POLR1A	99	63.804	ENSMMOG00000010216	polr1a	95	63.843	Mola_mola
ENSPCIG00000004222	POLR1A	99	83.898	ENSMODG00000009335	POLR1A	95	83.575	Monodelphis_domestica
ENSPCIG00000004222	POLR1A	99	64.434	ENSMALG00000013363	polr1a	95	64.555	Monopterus_albus
ENSPCIG00000004222	POLR1A	99	77.703	MGP_CAROLIEiJ_G0028494	Polr1a	95	78.171	Mus_caroli
ENSPCIG00000004222	POLR1A	99	78.131	ENSMUSG00000049553	Polr1a	95	78.070	Mus_musculus
ENSPCIG00000004222	POLR1A	99	78.523	MGP_PahariEiJ_G0022230	Polr1a	95	78.401	Mus_pahari
ENSPCIG00000004222	POLR1A	99	76.393	MGP_SPRETEiJ_G0029499	Polr1a	99	72.760	Mus_spretus
ENSPCIG00000004222	POLR1A	99	79.854	ENSMPUG00000009135	POLR1A	95	79.562	Mustela_putorius_furo
ENSPCIG00000004222	POLR1A	99	78.689	ENSMLUG00000015723	POLR1A	95	78.667	Myotis_lucifugus
ENSPCIG00000004222	POLR1A	99	77.556	ENSNGAG00000017907	Polr1a	95	78.632	Nannospalax_galili
ENSPCIG00000004222	POLR1A	99	64.609	ENSNBRG00000000519	polr1a	95	64.692	Neolamprologus_brichardi
ENSPCIG00000004222	POLR1A	99	77.650	ENSNLEG00000002264	POLR1A	95	78.087	Nomascus_leucogenys
ENSPCIG00000004222	POLR1A	74	97.500	ENSMEUG00000011665	-	70	97.500	Notamacropus_eugenii
ENSPCIG00000004222	POLR1A	99	72.428	ENSOPRG00000008269	POLR1A	96	72.905	Ochotona_princeps
ENSPCIG00000004222	POLR1A	99	79.291	ENSODEG00000003542	POLR1A	95	79.291	Octodon_degus
ENSPCIG00000004222	POLR1A	99	64.853	ENSONIG00000015895	polr1a	95	64.957	Oreochromis_niloticus
ENSPCIG00000004222	POLR1A	99	79.853	ENSOCUG00000010138	POLR1A	95	79.853	Oryctolagus_cuniculus
ENSPCIG00000004222	POLR1A	99	63.758	ENSORLG00000008753	polr1a	95	63.697	Oryzias_latipes
ENSPCIG00000004222	POLR1A	99	62.531	ENSORLG00020020726	polr1a	94	62.775	Oryzias_latipes_hni
ENSPCIG00000004222	POLR1A	94	74.468	ENSORLG00015016071	polr1a	93	74.468	Oryzias_latipes_hsok
ENSPCIG00000004222	POLR1A	99	78.459	ENSOGAG00000004031	POLR1A	95	78.641	Otolemur_garnettii
ENSPCIG00000004222	POLR1A	99	78.871	ENSOARG00000020601	POLR1A	95	78.931	Ovis_aries
ENSPCIG00000004222	POLR1A	99	78.116	ENSPPAG00000042450	POLR1A	95	78.736	Pan_paniscus
ENSPCIG00000004222	POLR1A	99	79.063	ENSPPRG00000006702	POLR1A	95	79.684	Panthera_pardus
ENSPCIG00000004222	POLR1A	99	78.593	ENSPTIG00000018783	POLR1A	95	79.212	Panthera_tigris_altaica
ENSPCIG00000004222	POLR1A	99	78.237	ENSPTRG00000012147	POLR1A	95	78.858	Pan_troglodytes
ENSPCIG00000004222	POLR1A	99	78.784	ENSPANG00000025908	POLR1A	95	79.526	Papio_anubis
ENSPCIG00000004222	POLR1A	93	77.083	ENSPKIG00000005468	polr1a	93	77.083	Paramormyrops_kingsleyae
ENSPCIG00000004222	POLR1A	60	69.950	ENSPSIG00000009321	-	92	71.717	Pelodiscus_sinensis
ENSPCIG00000004222	POLR1A	58	67.476	ENSPMGG00000009718	polr1a	95	67.476	Periophthalmus_magnuspinnatus
ENSPCIG00000004222	POLR1A	99	79.159	ENSPEMG00000022224	Polr1a	95	79.220	Peromyscus_maniculatus_bairdii
ENSPCIG00000004222	POLR1A	99	63.116	ENSPFOG00000005025	polr1a	95	62.812	Poecilia_formosa
ENSPCIG00000004222	POLR1A	99	63.209	ENSPLAG00000021389	polr1a	95	62.904	Poecilia_latipinna
ENSPCIG00000004222	POLR1A	99	60.888	ENSPMEG00000006463	polr1a	95	61.007	Poecilia_mexicana
ENSPCIG00000004222	POLR1A	99	63.200	ENSPREG00000002389	polr1a	95	62.736	Poecilia_reticulata
ENSPCIG00000004222	POLR1A	99	77.872	ENSPPYG00000012217	POLR1A	95	78.446	Pongo_abelii
ENSPCIG00000004222	POLR1A	86	97.436	ENSPCAG00000011582	POLR1A	82	97.436	Procavia_capensis
ENSPCIG00000004222	POLR1A	99	79.708	ENSPCOG00000026987	POLR1A	95	79.891	Propithecus_coquereli
ENSPCIG00000004222	POLR1A	93	76.586	ENSPVAG00000012674	POLR1A	90	76.784	Pteropus_vampyrus
ENSPCIG00000004222	POLR1A	99	64.338	ENSPNYG00000000026	polr1a	95	64.530	Pundamilia_nyererei
ENSPCIG00000004222	POLR1A	99	66.646	ENSPNAG00000019223	polr1a	94	67.862	Pygocentrus_nattereri
ENSPCIG00000004222	POLR1A	99	79.352	ENSRNOG00000009545	Polr1a	95	79.352	Rattus_norvegicus
ENSPCIG00000004222	POLR1A	99	78.176	ENSRBIG00000028335	POLR1A	95	78.749	Rhinopithecus_bieti
ENSPCIG00000004222	POLR1A	99	78.116	ENSRROG00000031473	POLR1A	95	78.689	Rhinopithecus_roxellana
ENSPCIG00000004222	POLR1A	99	35.773	YOR341W	RPA190	95	35.664	Saccharomyces_cerevisiae
ENSPCIG00000004222	POLR1A	99	78.906	ENSSBOG00000030262	POLR1A	95	78.919	Saimiri_boliviensis_boliviensis
ENSPCIG00000004222	POLR1A	99	82.121	ENSSHAG00000014739	POLR1A	95	83.636	Sarcophilus_harrisii
ENSPCIG00000004222	POLR1A	99	67.791	ENSSFOG00015019716	polr1a	95	68.118	Scleropages_formosus
ENSPCIG00000004222	POLR1A	99	64.390	ENSSMAG00000014342	polr1a	95	64.124	Scophthalmus_maximus
ENSPCIG00000004222	POLR1A	99	65.431	ENSSDUG00000014631	polr1a	95	65.591	Seriola_dumerili
ENSPCIG00000004222	POLR1A	99	64.063	ENSSLDG00000024095	polr1a	95	64.063	Seriola_lalandi_dorsalis
ENSPCIG00000004222	POLR1A	67	100.000	ENSSARG00000003136	-	67	100.000	Sorex_araneus
ENSPCIG00000004222	POLR1A	99	70.912	ENSSPUG00000004215	POLR1A	93	74.735	Sphenodon_punctatus
ENSPCIG00000004222	POLR1A	69	69.828	ENSSPAG00000016341	polr1a	99	69.740	Stegastes_partitus
ENSPCIG00000004222	POLR1A	88	81.072	ENSSSCG00000008226	POLR1A	99	81.136	Sus_scrofa
ENSPCIG00000004222	POLR1A	98	70.738	ENSTGUG00000010704	POLR1A	95	70.738	Taeniopygia_guttata
ENSPCIG00000004222	POLR1A	99	63.748	ENSTRUG00000002210	polr1a	97	64.627	Takifugu_rubripes
ENSPCIG00000004222	POLR1A	99	58.909	ENSTNIG00000010116	polr1a	95	58.545	Tetraodon_nigroviridis
ENSPCIG00000004222	POLR1A	72	97.436	ENSTBEG00000008646	POLR1A	70	97.436	Tupaia_belangeri
ENSPCIG00000004222	POLR1A	99	74.726	ENSTTRG00000008597	POLR1A	95	74.726	Tursiops_truncatus
ENSPCIG00000004222	POLR1A	66	78.480	ENSUAMG00000012158	-	88	79.048	Ursus_americanus
ENSPCIG00000004222	POLR1A	99	78.245	ENSUMAG00000006700	POLR1A	97	81.895	Ursus_maritimus
ENSPCIG00000004222	POLR1A	99	79.367	ENSVVUG00000001245	POLR1A	95	79.380	Vulpes_vulpes
ENSPCIG00000004222	POLR1A	99	67.927	ENSXETG00000001952	polr1a	99	69.756	Xenopus_tropicalis
ENSPCIG00000004222	POLR1A	99	63.437	ENSXMAG00000004032	polr1a	95	63.132	Xiphophorus_maculatus