EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000004415 (Gene tree)
Gene ID: 110217682
Gene Symbol: -
Alias: -
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 26115 bases
Position: chrFUWB01001032.1:345276-371390
Accession: 110217682
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000005307	RRM_1	PF00076.22	3.7e-18	1	2
ENSPCIP00000005307	RRM_1	PF00076.22	3.7e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000006659	-	1533	-	ENSPCIP00000005307	510 (aa)	XP_020855828	UPI000A280A12

Gene Model

Click here to download ENSPCIG00000004415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000004415's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000004415	-	100	85.910	ENSPCIG00000002955	-	100	85.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000004415	-	99	79.070	ENSG00000185946	RNPC3	100	82.703	Homo_sapiens
ENSPCIG00000004415	-	95	57.404	ENSAPOG00000017371	rnpc3	97	57.404	Acanthochromis_polyacanthus
ENSPCIG00000004415	-	98	79.331	ENSAMEG00000001694	RNPC3	99	78.613	Ailuropoda_melanoleuca
ENSPCIG00000004415	-	95	53.400	ENSACIG00000021043	rnpc3	97	53.400	Amphilophus_citrinellus
ENSPCIG00000004415	-	95	56.942	ENSAOCG00000014052	rnpc3	95	56.942	Amphiprion_ocellaris
ENSPCIG00000004415	-	95	56.740	ENSAPEG00000008739	rnpc3	95	56.740	Amphiprion_percula
ENSPCIG00000004415	-	95	55.467	ENSATEG00000021263	rnpc3	97	55.378	Anabas_testudineus
ENSPCIG00000004415	-	88	71.333	ENSAPLG00000015605	RNPC3	100	72.000	Anas_platyrhynchos
ENSPCIG00000004415	-	94	70.124	ENSACAG00000002029	RNPC3	96	70.697	Anolis_carolinensis
ENSPCIG00000004415	-	99	78.101	ENSANAG00000019950	RNPC3	99	78.101	Aotus_nancymaae
ENSPCIG00000004415	-	95	56.442	ENSACLG00000014702	rnpc3	97	56.442	Astatotilapia_calliptera
ENSPCIG00000004415	-	95	54.379	ENSAMXG00000033372	rnpc3	97	56.415	Astyanax_mexicanus
ENSPCIG00000004415	-	99	78.876	ENSBTAG00000019091	RNPC3	99	78.876	Bos_taurus
ENSPCIG00000004415	-	99	76.163	ENSCJAG00000035686	RNPC3	99	76.357	Callithrix_jacchus
ENSPCIG00000004415	-	99	79.304	ENSCAFG00000019972	RNPC3	99	79.304	Canis_familiaris
ENSPCIG00000004415	-	99	79.497	ENSCAFG00020011300	RNPC3	99	79.497	Canis_lupus_dingo
ENSPCIG00000004415	-	99	78.488	ENSCHIG00000020361	RNPC3	99	78.488	Capra_hircus
ENSPCIG00000004415	-	99	76.744	ENSTSYG00000030256	RNPC3	99	76.744	Carlito_syrichta
ENSPCIG00000004415	-	84	68.349	ENSCAPG00000013600	RNPC3	97	68.445	Cavia_aperea
ENSPCIG00000004415	-	99	76.744	ENSCPOG00000031638	RNPC3	99	76.744	Cavia_porcellus
ENSPCIG00000004415	-	99	78.295	ENSCCAG00000024301	RNPC3	99	78.295	Cebus_capucinus
ENSPCIG00000004415	-	98	62.076	ENSCATG00000035930	-	98	61.277	Cercocebus_atys
ENSPCIG00000004415	-	99	79.223	ENSCATG00000002086	RNPC3	99	79.223	Cercocebus_atys
ENSPCIG00000004415	-	99	75.581	ENSCLAG00000005169	RNPC3	99	74.612	Chinchilla_lanigera
ENSPCIG00000004415	-	99	79.223	ENSCSAG00000001519	RNPC3	99	79.223	Chlorocebus_sabaeus
ENSPCIG00000004415	-	96	73.428	ENSCPBG00000028311	RNPC3	96	73.834	Chrysemys_picta_bellii
ENSPCIG00000004415	-	94	38.076	ENSCING00000021276	-	99	38.076	Ciona_intestinalis
ENSPCIG00000004415	-	99	78.835	ENSCANG00000031444	RNPC3	99	78.835	Colobus_angolensis_palliatus
ENSPCIG00000004415	-	99	78.682	ENSCGRG00001019276	Rnpc3	100	78.682	Cricetulus_griseus_chok1gshd
ENSPCIG00000004415	-	87	79.204	ENSCGRG00000000053	Rnpc3	100	79.204	Cricetulus_griseus_crigri
ENSPCIG00000004415	-	95	54.490	ENSCSEG00000013475	rnpc3	96	54.490	Cynoglossus_semilaevis
ENSPCIG00000004415	-	95	54.291	ENSCVAG00000002645	rnpc3	97	54.291	Cyprinodon_variegatus
ENSPCIG00000004415	-	95	56.487	ENSDARG00000011247	rnpc3	97	57.315	Danio_rerio
ENSPCIG00000004415	-	99	78.488	ENSDNOG00000044555	-	99	78.488	Dasypus_novemcinctus
ENSPCIG00000004415	-	99	77.907	ENSDNOG00000047498	-	99	77.907	Dasypus_novemcinctus
ENSPCIG00000004415	-	100	76.505	ENSDORG00000027343	Rnpc3	100	76.505	Dipodomys_ordii
ENSPCIG00000004415	-	95	48.509	ENSEBUG00000002068	rnpc3	97	48.907	Eptatretus_burgeri
ENSPCIG00000004415	-	99	79.264	ENSEASG00005015957	RNPC3	99	79.264	Equus_asinus_asinus
ENSPCIG00000004415	-	99	79.457	ENSECAG00000021148	RNPC3	99	79.457	Equus_caballus
ENSPCIG00000004415	-	95	53.725	ENSELUG00000002264	rnpc3	97	50.383	Esox_lucius
ENSPCIG00000004415	-	99	78.530	ENSFCAG00000024312	RNPC3	99	78.530	Felis_catus
ENSPCIG00000004415	-	88	74.222	ENSFALG00000002580	RNPC3	100	73.778	Ficedula_albicollis
ENSPCIG00000004415	-	99	77.132	ENSFDAG00000019948	RNPC3	100	77.132	Fukomys_damarensis
ENSPCIG00000004415	-	96	52.653	ENSFHEG00000020647	rnpc3	98	53.333	Fundulus_heteroclitus
ENSPCIG00000004415	-	96	54.326	ENSGMOG00000019213	rnpc3	95	53.469	Gadus_morhua
ENSPCIG00000004415	-	96	73.727	ENSGALG00000005162	RNPC3	89	72.709	Gallus_gallus
ENSPCIG00000004415	-	95	53.924	ENSGAFG00000017236	rnpc3	97	54.418	Gambusia_affinis
ENSPCIG00000004415	-	95	56.098	ENSGACG00000002048	rnpc3	97	55.179	Gasterosteus_aculeatus
ENSPCIG00000004415	-	96	73.225	ENSGAGG00000008438	RNPC3	95	73.428	Gopherus_agassizii
ENSPCIG00000004415	-	99	66.139	ENSGGOG00000026201	-	99	66.139	Gorilla_gorilla
ENSPCIG00000004415	-	79	67.500	ENSHBUG00000015966	rnpc3	83	67.500	Haplochromis_burtoni
ENSPCIG00000004415	-	99	77.132	ENSHGLG00000001708	RNPC3	99	77.132	Heterocephalus_glaber_female
ENSPCIG00000004415	-	99	77.132	ENSHGLG00100003005	RNPC3	99	77.132	Heterocephalus_glaber_male
ENSPCIG00000004415	-	97	54.274	ENSHCOG00000017135	rnpc3	98	54.509	Hippocampus_comes
ENSPCIG00000004415	-	95	55.870	ENSIPUG00000002916	rnpc3	98	56.073	Ictalurus_punctatus
ENSPCIG00000004415	-	99	78.488	ENSSTOG00000025020	RNPC3	99	78.488	Ictidomys_tridecemlineatus
ENSPCIG00000004415	-	99	76.311	ENSJJAG00000010203	Rnpc3	100	76.311	Jaculus_jaculus
ENSPCIG00000004415	-	95	55.444	ENSKMAG00000017358	rnpc3	97	55.172	Kryptolebias_marmoratus
ENSPCIG00000004415	-	95	55.847	ENSLBEG00000024901	rnpc3	95	55.847	Labrus_bergylta
ENSPCIG00000004415	-	95	63.618	ENSLACG00000005720	RNPC3	90	64.228	Latimeria_chalumnae
ENSPCIG00000004415	-	96	58.384	ENSLOCG00000007986	rnpc3	97	60.808	Lepisosteus_oculatus
ENSPCIG00000004415	-	99	78.488	ENSLAFG00000032342	RNPC3	100	78.488	Loxodonta_africana
ENSPCIG00000004415	-	99	79.029	ENSMFAG00000002004	RNPC3	99	79.029	Macaca_fascicularis
ENSPCIG00000004415	-	98	59.600	ENSMFAG00000002917	-	97	59.600	Macaca_fascicularis
ENSPCIG00000004415	-	81	74.879	ENSMMUG00000002098	-	90	74.879	Macaca_mulatta
ENSPCIG00000004415	-	99	78.835	ENSMMUG00000018039	RNPC3	99	78.835	Macaca_mulatta
ENSPCIG00000004415	-	76	63.590	ENSMNEG00000029209	-	98	57.600	Macaca_nemestrina
ENSPCIG00000004415	-	99	74.563	ENSMNEG00000033950	RNPC3	99	74.563	Macaca_nemestrina
ENSPCIG00000004415	-	99	79.223	ENSMLEG00000033628	RNPC3	99	79.223	Mandrillus_leucophaeus
ENSPCIG00000004415	-	98	60.594	ENSMLEG00000034644	-	98	60.236	Mandrillus_leucophaeus
ENSPCIG00000004415	-	95	52.323	ENSMAMG00000007496	rnpc3	96	50.491	Mastacembelus_armatus
ENSPCIG00000004415	-	95	55.534	ENSMZEG00005020233	rnpc3	97	55.534	Maylandia_zebra
ENSPCIG00000004415	-	88	71.930	ENSMGAG00000006381	RNPC3	100	71.711	Meleagris_gallopavo
ENSPCIG00000004415	-	96	79.352	ENSMAUG00000001358	Rnpc3	100	77.907	Mesocricetus_auratus
ENSPCIG00000004415	-	99	79.457	ENSMICG00000029591	RNPC3	99	79.457	Microcebus_murinus
ENSPCIG00000004415	-	96	79.150	ENSMOCG00000013423	Rnpc3	100	77.606	Microtus_ochrogaster
ENSPCIG00000004415	-	95	52.156	ENSMMOG00000005309	rnpc3	96	51.724	Mola_mola
ENSPCIG00000004415	-	100	96.863	ENSMODG00000002946	RNPC3	100	96.863	Monodelphis_domestica
ENSPCIG00000004415	-	95	52.906	ENSMALG00000015471	rnpc3	97	52.988	Monopterus_albus
ENSPCIG00000004415	-	99	77.756	MGP_CAROLIEiJ_G0025555	Rnpc3	100	77.756	Mus_caroli
ENSPCIG00000004415	-	99	78.447	ENSMUSG00000027981	Rnpc3	100	78.447	Mus_musculus
ENSPCIG00000004415	-	99	78.346	MGP_PahariEiJ_G0027001	Rnpc3	100	78.346	Mus_pahari
ENSPCIG00000004415	-	99	78.150	MGP_SPRETEiJ_G0026505	Rnpc3	100	78.150	Mus_spretus
ENSPCIG00000004415	-	99	78.337	ENSMPUG00000007349	RNPC3	99	78.337	Mustela_putorius_furo
ENSPCIG00000004415	-	99	77.132	ENSMLUG00000028743	RNPC3	99	77.132	Myotis_lucifugus
ENSPCIG00000004415	-	99	77.282	ENSNGAG00000010939	Rnpc3	100	77.282	Nannospalax_galili
ENSPCIG00000004415	-	95	56.442	ENSNBRG00000012196	rnpc3	94	56.442	Neolamprologus_brichardi
ENSPCIG00000004415	-	99	78.682	ENSNLEG00000012013	RNPC3	99	78.682	Nomascus_leucogenys
ENSPCIG00000004415	-	99	75.000	ENSODEG00000007612	RNPC3	99	75.000	Octodon_degus
ENSPCIG00000004415	-	95	56.707	ENSONIG00000004770	rnpc3	99	56.707	Oreochromis_niloticus
ENSPCIG00000004415	-	90	77.516	ENSOANG00000008220	RNPC3	100	77.516	Ornithorhynchus_anatinus
ENSPCIG00000004415	-	99	77.713	ENSOCUG00000004016	RNPC3	99	78.101	Oryctolagus_cuniculus
ENSPCIG00000004415	-	95	54.713	ENSORLG00000005694	rnpc3	97	54.713	Oryzias_latipes
ENSPCIG00000004415	-	95	55.328	ENSORLG00020005513	rnpc3	97	55.328	Oryzias_latipes_hni
ENSPCIG00000004415	-	95	54.713	ENSORLG00015002179	rnpc3	97	54.713	Oryzias_latipes_hsok
ENSPCIG00000004415	-	96	54.251	ENSOMEG00000017737	rnpc3	98	54.251	Oryzias_melastigma
ENSPCIG00000004415	-	99	79.417	ENSOGAG00000026182	RNPC3	99	79.417	Otolemur_garnettii
ENSPCIG00000004415	-	99	78.682	ENSOARG00000018719	RNPC3	99	78.682	Ovis_aries
ENSPCIG00000004415	-	99	78.723	ENSPPAG00000037459	RNPC3	99	78.723	Pan_paniscus
ENSPCIG00000004415	-	99	67.129	ENSPPAG00000030278	-	99	67.327	Pan_paniscus
ENSPCIG00000004415	-	99	78.723	ENSPPRG00000020246	RNPC3	99	78.723	Panthera_pardus
ENSPCIG00000004415	-	98	78.895	ENSPTIG00000009887	RNPC3	99	78.895	Panthera_tigris_altaica
ENSPCIG00000004415	-	99	78.876	ENSPTRG00000033902	RNPC3	99	78.876	Pan_troglodytes
ENSPCIG00000004415	-	98	66.068	ENSPTRG00000044227	-	98	66.068	Pan_troglodytes
ENSPCIG00000004415	-	98	63.944	ENSPANG00000029957	-	99	62.948	Papio_anubis
ENSPCIG00000004415	-	99	79.223	ENSPANG00000012137	RNPC3	99	79.223	Papio_anubis
ENSPCIG00000004415	-	95	53.722	ENSPKIG00000008828	rnpc3	96	52.621	Paramormyrops_kingsleyae
ENSPCIG00000004415	-	63	73.171	ENSPSIG00000007396	RNPC3	100	71.037	Pelodiscus_sinensis
ENSPCIG00000004415	-	96	51.287	ENSPMGG00000011742	rnpc3	98	52.079	Periophthalmus_magnuspinnatus
ENSPCIG00000004415	-	88	77.243	ENSPEMG00000020112	Rnpc3	100	77.876	Peromyscus_maniculatus_bairdii
ENSPCIG00000004415	-	50	47.744	ENSPMAG00000003778	rnpc3	97	47.195	Petromyzon_marinus
ENSPCIG00000004415	-	95	53.939	ENSPFOG00000009895	rnpc3	97	53.939	Poecilia_formosa
ENSPCIG00000004415	-	95	53.924	ENSPLAG00000012023	rnpc3	97	53.924	Poecilia_latipinna
ENSPCIG00000004415	-	95	54.141	ENSPMEG00000003663	rnpc3	97	54.141	Poecilia_mexicana
ENSPCIG00000004415	-	95	53.924	ENSPREG00000010206	rnpc3	97	54.016	Poecilia_reticulata
ENSPCIG00000004415	-	84	75.289	ENSPPYG00000001102	RNPC3	99	75.289	Pongo_abelii
ENSPCIG00000004415	-	95	56.237	ENSPNYG00000020603	rnpc3	97	56.237	Pundamilia_nyererei
ENSPCIG00000004415	-	95	52.883	ENSPNAG00000000524	rnpc3	90	51.378	Pygocentrus_nattereri
ENSPCIG00000004415	-	99	76.938	ENSRNOG00000017310	Rnpc3	100	76.938	Rattus_norvegicus
ENSPCIG00000004415	-	99	74.031	ENSRBIG00000043897	RNPC3	99	74.031	Rhinopithecus_bieti
ENSPCIG00000004415	-	99	79.029	ENSRROG00000032334	RNPC3	99	79.029	Rhinopithecus_roxellana
ENSPCIG00000004415	-	99	77.907	ENSSBOG00000024473	RNPC3	97	80.144	Saimiri_boliviensis_boliviensis
ENSPCIG00000004415	-	100	96.505	ENSSHAG00000011859	RNPC3	100	96.505	Sarcophilus_harrisii
ENSPCIG00000004415	-	95	58.824	ENSSFOG00015013055	rnpc3	99	56.607	Scleropages_formosus
ENSPCIG00000004415	-	95	54.365	ENSSMAG00000020346	rnpc3	97	52.871	Scophthalmus_maximus
ENSPCIG00000004415	-	95	54.871	ENSSDUG00000006600	rnpc3	97	54.871	Seriola_dumerili
ENSPCIG00000004415	-	95	55.070	ENSSLDG00000007979	rnpc3	97	55.070	Seriola_lalandi_dorsalis
ENSPCIG00000004415	-	94	75.000	ENSSPUG00000008539	-	92	76.458	Sphenodon_punctatus
ENSPCIG00000004415	-	95	69.262	ENSSPUG00000003872	-	92	69.467	Sphenodon_punctatus
ENSPCIG00000004415	-	95	56.327	ENSSPAG00000005633	rnpc3	97	56.735	Stegastes_partitus
ENSPCIG00000004415	-	99	78.488	ENSSSCG00000037254	RNPC3	99	78.295	Sus_scrofa
ENSPCIG00000004415	-	88	75.056	ENSTGUG00000004795	-	100	73.497	Taeniopygia_guttata
ENSPCIG00000004415	-	95	55.984	ENSTNIG00000018963	rnpc3	97	55.984	Tetraodon_nigroviridis
ENSPCIG00000004415	-	98	79.487	ENSUMAG00000007775	RNPC3	99	79.487	Ursus_maritimus
ENSPCIG00000004415	-	99	79.497	ENSVVUG00000000331	RNPC3	99	79.497	Vulpes_vulpes
ENSPCIG00000004415	-	95	52.590	ENSXETG00000025027	rnpc3	97	52.789	Xenopus_tropicalis
ENSPCIG00000004415	-	95	51.282	ENSXCOG00000005013	rnpc3	97	53.254	Xiphophorus_couchianus
ENSPCIG00000004415	-	95	53.012	ENSXMAG00000006495	rnpc3	97	54.016	Xiphophorus_maculatus