EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000005442 (Gene tree)
Gene ID: 110194383
Gene Symbol: CHD3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 27798 bases
Position: chrFUWB01000940.1:1163893-1191690
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000031958	ResIII	PF04851.15	3.2e-08	1	1
ENSPCIP00000031630	ResIII	PF04851.15	3.3e-08	1	1
ENSPCIP00000031548	ResIII	PF04851.15	3.6e-08	1	1
ENSPCIP00000032041	ResIII	PF04851.15	3.6e-08	1	1
ENSPCIP00000031557	ResIII	PF04851.15	3.7e-08	1	1
ENSPCIP00000031558	ResIII	PF04851.15	3.8e-08	1	1
ENSPCIP00000032038	ResIII	PF04851.15	3.9e-08	1	1
ENSPCIP00000031498	ResIII	PF04851.15	4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000038733	CHD3-201	5871	-	ENSPCIP00000031498	1956 (aa)	-	-
ENSPCIT00000038892	CHD3-205	5199	-	ENSPCIP00000031630	1732 (aa)	-	-
ENSPCIT00000038796	CHD3-202	5616	-	ENSPCIP00000031548	1871 (aa)	-	-
ENSPCIT00000038805	CHD3-203	5694	-	ENSPCIP00000031557	1897 (aa)	-	-
ENSPCIT00000039392	CHD3-208	5352	-	ENSPCIP00000032041	1783 (aa)	-	-
ENSPCIT00000038806	CHD3-204	5787	-	ENSPCIP00000031558	1928 (aa)	-	-
ENSPCIT00000039389	CHD3-207	5562	-	ENSPCIP00000032038	1853 (aa)	-	-
ENSPCIT00000039288	CHD3-206	5193	-	ENSPCIP00000031958	1730 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000005442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000005442's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000005442	CHD3	92	80.180	ENSPCIG00000001846	-	98	74.119
ENSPCIG00000005442	CHD3	93	84.507	ENSPCIG00000028310	CHD5	97	72.774
ENSPCIG00000005442	CHD3	51	38.614	ENSPCIG00000009417	-	62	36.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000005442	CHD3	98	95.582	ENSG00000170004	CHD3	97	100.000	Homo_sapiens
ENSPCIG00000005442	CHD3	85	90.541	ENSAPOG00000005614	chd3	92	90.541	Acanthochromis_polyacanthus
ENSPCIG00000005442	CHD3	67	98.370	ENSAMEG00000003025	-	100	91.722	Ailuropoda_melanoleuca
ENSPCIG00000005442	CHD3	85	91.216	ENSACIG00000019671	chd3	97	91.216	Amphilophus_citrinellus
ENSPCIG00000005442	CHD3	90	90.955	ENSAOCG00000023784	chd3	94	90.541	Amphiprion_ocellaris
ENSPCIG00000005442	CHD3	90	90.955	ENSAPEG00000006341	chd3	89	82.489	Amphiprion_percula
ENSPCIG00000005442	CHD3	95	84.298	ENSATEG00000000848	chd3	95	81.443	Anabas_testudineus
ENSPCIG00000005442	CHD3	97	88.669	ENSACAG00000004276	CHD3	94	86.017	Anolis_carolinensis
ENSPCIG00000005442	CHD3	97	95.935	ENSANAG00000034323	CHD3	99	93.223	Aotus_nancymaae
ENSPCIG00000005442	CHD3	87	91.414	ENSACLG00000009222	chd3	92	84.045	Astatotilapia_calliptera
ENSPCIG00000005442	CHD3	98	95.092	ENSBTAG00000014377	CHD3	97	93.271	Bos_taurus
ENSPCIG00000005442	CHD3	99	94.193	ENSCJAG00000014766	CHD3	98	93.988	Callithrix_jacchus
ENSPCIG00000005442	CHD3	97	95.241	ENSCAFG00000016859	CHD3	98	92.585	Canis_familiaris
ENSPCIG00000005442	CHD3	95	95.122	ENSCAFG00020007422	CHD3	100	92.366	Canis_lupus_dingo
ENSPCIG00000005442	CHD3	97	95.935	ENSCHIG00000016737	CHD3	99	92.890	Capra_hircus
ENSPCIG00000005442	CHD3	98	95.142	ENSTSYG00000035658	CHD3	99	93.188	Carlito_syrichta
ENSPCIG00000005442	CHD3	97	96.296	ENSCAPG00000014864	CHD3	98	89.944	Cavia_aperea
ENSPCIG00000005442	CHD3	97	96.296	ENSCPOG00000022653	CHD3	98	92.534	Cavia_porcellus
ENSPCIG00000005442	CHD3	99	94.193	ENSCCAG00000034792	CHD3	99	92.273	Cebus_capucinus
ENSPCIG00000005442	CHD3	97	95.935	ENSCATG00000041717	CHD3	99	93.289	Cercocebus_atys
ENSPCIG00000005442	CHD3	97	96.296	ENSCLAG00000010523	CHD3	100	93.779	Chinchilla_lanigera
ENSPCIG00000005442	CHD3	97	95.935	ENSCSAG00000011122	CHD3	99	93.384	Chlorocebus_sabaeus
ENSPCIG00000005442	CHD3	93	87.253	ENSCPBG00000011966	CHD3	99	87.748	Chrysemys_picta_bellii
ENSPCIG00000005442	CHD3	97	95.935	ENSCANG00000037641	CHD3	99	93.188	Colobus_angolensis_palliatus
ENSPCIG00000005442	CHD3	97	95.935	ENSCGRG00001011306	Chd3	100	93.165	Cricetulus_griseus_chok1gshd
ENSPCIG00000005442	CHD3	93	96.341	ENSCGRG00000007878	Chd3	99	94.118	Cricetulus_griseus_crigri
ENSPCIG00000005442	CHD3	89	87.054	ENSCSEG00000004489	chd3	96	82.573	Cynoglossus_semilaevis
ENSPCIG00000005442	CHD3	97	76.115	ENSCVAG00000007293	chd3	97	78.258	Cyprinodon_variegatus
ENSPCIG00000005442	CHD3	89	89.950	ENSDARG00000021405	chd3	88	89.950	Danio_rerio
ENSPCIG00000005442	CHD3	96	91.756	ENSDNOG00000047846	CHD3	91	87.749	Dasypus_novemcinctus
ENSPCIG00000005442	CHD3	99	93.422	ENSDORG00000010713	Chd3	100	93.165	Dipodomys_ordii
ENSPCIG00000005442	CHD3	99	93.902	ENSETEG00000017733	CHD3	100	86.981	Echinops_telfairi
ENSPCIG00000005442	CHD3	74	84.793	ENSEBUG00000008310	chd3	99	70.694	Eptatretus_burgeri
ENSPCIG00000005442	CHD3	93	95.935	ENSEASG00005019360	CHD3	100	93.075	Equus_asinus_asinus
ENSPCIG00000005442	CHD3	93	95.935	ENSECAG00000010051	CHD3	100	93.130	Equus_caballus
ENSPCIG00000005442	CHD3	90	90.323	ENSEEUG00000015205	CHD3	93	86.441	Erinaceus_europaeus
ENSPCIG00000005442	CHD3	86	90.541	ENSELUG00000019499	chd3	99	90.541	Esox_lucius
ENSPCIG00000005442	CHD3	99	92.991	ENSFCAG00000009629	CHD3	96	92.796	Felis_catus
ENSPCIG00000005442	CHD3	98	92.839	ENSFDAG00000008220	CHD3	99	90.243	Fukomys_damarensis
ENSPCIG00000005442	CHD3	83	90.909	ENSGMOG00000013599	chd3	90	80.793	Gadus_morhua
ENSPCIG00000005442	CHD3	62	77.564	ENSGAFG00000004055	chd3	96	82.161	Gambusia_affinis
ENSPCIG00000005442	CHD3	99	82.520	ENSGACG00000019275	chd3	85	89.447	Gasterosteus_aculeatus
ENSPCIG00000005442	CHD3	81	87.491	ENSGAGG00000013164	CHD3	99	86.160	Gopherus_agassizii
ENSPCIG00000005442	CHD3	97	95.935	ENSGGOG00000013496	CHD3	99	93.188	Gorilla_gorilla
ENSPCIG00000005442	CHD3	99	93.834	ENSHGLG00000012017	CHD3	99	92.673	Heterocephalus_glaber_female
ENSPCIG00000005442	CHD3	85	97.984	ENSHGLG00100013902	CHD3	99	86.709	Heterocephalus_glaber_male
ENSPCIG00000005442	CHD3	95	85.232	ENSHCOG00000010170	chd3	83	89.950	Hippocampus_comes
ENSPCIG00000005442	CHD3	85	91.216	ENSIPUG00000003271	chd3	90	91.216	Ictalurus_punctatus
ENSPCIG00000005442	CHD3	99	94.087	ENSSTOG00000025907	CHD3	100	93.882	Ictidomys_tridecemlineatus
ENSPCIG00000005442	CHD3	99	93.368	ENSJJAG00000017633	Chd3	100	93.111	Jaculus_jaculus
ENSPCIG00000005442	CHD3	93	92.079	ENSKMAG00000019292	chd3	90	91.837	Kryptolebias_marmoratus
ENSPCIG00000005442	CHD3	97	73.751	ENSLBEG00000028485	chd3	92	75.566	Labrus_bergylta
ENSPCIG00000005442	CHD3	94	86.441	ENSLACG00000008031	CHD3	98	74.352	Latimeria_chalumnae
ENSPCIG00000005442	CHD3	95	85.259	ENSLOCG00000013965	chd3	95	78.987	Lepisosteus_oculatus
ENSPCIG00000005442	CHD3	99	95.181	ENSLAFG00000000572	CHD3	98	93.320	Loxodonta_africana
ENSPCIG00000005442	CHD3	97	95.935	ENSMFAG00000020113	CHD3	99	93.289	Macaca_fascicularis
ENSPCIG00000005442	CHD3	99	95.935	ENSMMUG00000022221	CHD3	99	91.743	Macaca_mulatta
ENSPCIG00000005442	CHD3	99	93.795	ENSMNEG00000001728	CHD3	99	93.238	Macaca_nemestrina
ENSPCIG00000005442	CHD3	97	95.935	ENSMLEG00000032249	CHD3	99	93.289	Mandrillus_leucophaeus
ENSPCIG00000005442	CHD3	93	77.134	ENSMAMG00000000564	chd3	99	77.934	Mastacembelus_armatus
ENSPCIG00000005442	CHD3	97	95.528	ENSMAUG00000013873	Chd3	96	92.916	Mesocricetus_auratus
ENSPCIG00000005442	CHD3	98	95.142	ENSMICG00000008741	CHD3	99	89.909	Microcebus_murinus
ENSPCIG00000005442	CHD3	97	95.935	ENSMOCG00000004848	Chd3	100	93.302	Microtus_ochrogaster
ENSPCIG00000005442	CHD3	95	82.857	ENSMMOG00000012699	chd3	90	87.336	Mola_mola
ENSPCIG00000005442	CHD3	93	98.257	ENSMODG00000007509	CHD3	100	98.276	Monodelphis_domestica
ENSPCIG00000005442	CHD3	99	93.176	MGP_CAROLIEiJ_G0016564	Chd3	100	93.361	Mus_caroli
ENSPCIG00000005442	CHD3	99	93.125	ENSMUSG00000018474	Chd3	99	93.309	Mus_musculus
ENSPCIG00000005442	CHD3	100	93.238	MGP_PahariEiJ_G0017695	Chd3	100	93.463	Mus_pahari
ENSPCIG00000005442	CHD3	99	93.227	MGP_SPRETEiJ_G0017400	Chd3	100	93.309	Mus_spretus
ENSPCIG00000005442	CHD3	87	96.759	ENSMPUG00000008861	CHD3	100	92.770	Mustela_putorius_furo
ENSPCIG00000005442	CHD3	98	94.737	ENSMLUG00000014643	-	98	92.081	Myotis_lucifugus
ENSPCIG00000005442	CHD3	97	95.935	ENSNGAG00000000773	Chd3	98	92.101	Nannospalax_galili
ENSPCIG00000005442	CHD3	85	91.892	ENSNBRG00000000636	chd3	96	79.531	Neolamprologus_brichardi
ENSPCIG00000005442	CHD3	97	93.797	ENSNLEG00000009770	CHD3	100	90.437	Nomascus_leucogenys
ENSPCIG00000005442	CHD3	88	97.967	ENSMEUG00000005852	CHD3	85	98.462	Notamacropus_eugenii
ENSPCIG00000005442	CHD3	95	96.341	ENSOPRG00000011069	CHD3	100	91.827	Ochotona_princeps
ENSPCIG00000005442	CHD3	97	95.528	ENSODEG00000017785	CHD3	99	92.585	Octodon_degus
ENSPCIG00000005442	CHD3	96	84.490	ENSONIG00000009292	chd3	100	74.884	Oreochromis_niloticus
ENSPCIG00000005442	CHD3	99	92.395	ENSOCUG00000029299	CHD3	100	88.340	Oryctolagus_cuniculus
ENSPCIG00000005442	CHD3	85	74.166	ENSORLG00000007107	chd3	91	76.236	Oryzias_latipes
ENSPCIG00000005442	CHD3	60	76.099	ENSORLG00020008387	chd3	93	83.222	Oryzias_latipes_hni
ENSPCIG00000005442	CHD3	90	82.564	ENSOMEG00000013691	chd3	99	78.123	Oryzias_melastigma
ENSPCIG00000005442	CHD3	97	95.122	ENSOGAG00000003216	CHD3	99	92.433	Otolemur_garnettii
ENSPCIG00000005442	CHD3	98	94.907	ENSOARG00000017855	CHD3	99	91.395	Ovis_aries
ENSPCIG00000005442	CHD3	98	95.238	ENSPPAG00000032886	CHD3	99	90.982	Pan_paniscus
ENSPCIG00000005442	CHD3	99	94.039	ENSPPRG00000000626	CHD3	98	93.628	Panthera_pardus
ENSPCIG00000005442	CHD3	97	95.935	ENSPTRG00000008714	CHD3	99	93.340	Pan_troglodytes
ENSPCIG00000005442	CHD3	97	95.935	ENSPANG00000023938	CHD3	99	92.362	Papio_anubis
ENSPCIG00000005442	CHD3	92	91.500	ENSPKIG00000006305	chd3	99	80.714	Paramormyrops_kingsleyae
ENSPCIG00000005442	CHD3	62	89.918	ENSPSIG00000010177	CHD3	98	90.659	Pelodiscus_sinensis
ENSPCIG00000005442	CHD3	97	95.935	ENSPEMG00000014262	Chd3	99	92.202	Peromyscus_maniculatus_bairdii
ENSPCIG00000005442	CHD3	90	90.955	ENSPFOG00000012464	chd3	87	80.205	Poecilia_formosa
ENSPCIG00000005442	CHD3	91	81.569	ENSPLAG00000002887	chd3	92	81.541	Poecilia_latipinna
ENSPCIG00000005442	CHD3	55	80.908	ENSPMEG00000016725	chd3	91	82.644	Poecilia_mexicana
ENSPCIG00000005442	CHD3	91	88.444	ENSPREG00000011044	chd3	88	90.955	Poecilia_reticulata
ENSPCIG00000005442	CHD3	97	95.935	ENSPPYG00000007940	CHD3	98	90.471	Pongo_abelii
ENSPCIG00000005442	CHD3	93	97.933	ENSPCAG00000004350	CHD3	96	92.438	Procavia_capensis
ENSPCIG00000005442	CHD3	98	95.547	ENSPCOG00000020952	CHD3	99	92.444	Propithecus_coquereli
ENSPCIG00000005442	CHD3	84	96.804	ENSPVAG00000016344	CHD3	87	96.804	Pteropus_vampyrus
ENSPCIG00000005442	CHD3	96	81.601	ENSPNAG00000020393	chd3	96	85.921	Pygocentrus_nattereri
ENSPCIG00000005442	CHD3	93	95.122	ENSRNOG00000009722	Chd3	100	91.304	Rattus_norvegicus
ENSPCIG00000005442	CHD3	97	95.935	ENSRBIG00000033562	CHD3	99	90.261	Rhinopithecus_bieti
ENSPCIG00000005442	CHD3	97	95.935	ENSRROG00000029554	CHD3	99	93.289	Rhinopithecus_roxellana
ENSPCIG00000005442	CHD3	97	95.935	ENSSBOG00000020719	CHD3	99	93.096	Saimiri_boliviensis_boliviensis
ENSPCIG00000005442	CHD3	99	97.408	ENSSHAG00000014412	CHD3	100	98.029	Sarcophilus_harrisii
ENSPCIG00000005442	CHD3	88	88.839	ENSSFOG00015023123	chd3	98	74.036	Scleropages_formosus
ENSPCIG00000005442	CHD3	92	86.017	ENSSMAG00000006451	chd3	99	78.264	Scophthalmus_maximus
ENSPCIG00000005442	CHD3	58	75.644	ENSSDUG00000005792	chd3	87	82.893	Seriola_dumerili
ENSPCIG00000005442	CHD3	90	90.955	ENSSPAG00000013694	chd3	95	90.541	Stegastes_partitus
ENSPCIG00000005442	CHD3	98	95.228	ENSSSCG00000021363	CHD3	100	92.920	Sus_scrofa
ENSPCIG00000005442	CHD3	81	78.616	ENSTRUG00000014990	chd3	87	82.589	Takifugu_rubripes
ENSPCIG00000005442	CHD3	95	78.123	ENSTNIG00000012998	chd3	97	78.233	Tetraodon_nigroviridis
ENSPCIG00000005442	CHD3	68	97.273	ENSTBEG00000011454	-	71	97.273	Tupaia_belangeri
ENSPCIG00000005442	CHD3	96	97.447	ENSTTRG00000010295	CHD3	97	93.097	Tursiops_truncatus
ENSPCIG00000005442	CHD3	93	95.528	ENSUAMG00000005475	CHD3	99	91.621	Ursus_americanus
ENSPCIG00000005442	CHD3	58	98.148	ENSVPAG00000010794	-	62	98.148	Vicugna_pacos
ENSPCIG00000005442	CHD3	98	95.241	ENSVVUG00000028011	CHD3	98	92.427	Vulpes_vulpes
ENSPCIG00000005442	CHD3	95	82.213	ENSXETG00000012991	chd3	92	73.770	Xenopus_tropicalis
ENSPCIG00000005442	CHD3	58	82.300	ENSXCOG00000000809	chd3	93	82.525	Xiphophorus_couchianus
ENSPCIG00000005442	CHD3	87	86.782	ENSXMAG00000016035	chd3	98	90.541	Xiphophorus_maculatus