EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000005877 (Gene tree)
Gene ID: 110222484
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 26909 bases
Position: chrFUWB01000201.1:1447943-1474851
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000006910	Tudor-knot	PF11717.8	8.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000008742	-	2620	-	ENSPCIP00000006910	695 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000005877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000005877's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000005877	-	60	88.249	ENSPCIG00000015933	-	98	88.249

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000005877	-	75	87.380	ENSG00000005302	MSL3	98	91.935	Homo_sapiens
ENSPCIG00000005877	-	75	60.628	ENSAPOG00000022282	MSL3	99	61.852	Acanthochromis_polyacanthus
ENSPCIG00000005877	-	71	87.780	ENSAMEG00000010145	MSL3	96	88.798	Ailuropoda_melanoleuca
ENSPCIG00000005877	-	75	60.606	ENSACIG00000019703	MSL3	99	60.342	Amphilophus_citrinellus
ENSPCIG00000005877	-	75	61.754	ENSAOCG00000001997	MSL3	99	62.384	Amphiprion_ocellaris
ENSPCIG00000005877	-	75	61.581	ENSAPEG00000013147	MSL3	99	62.316	Amphiprion_percula
ENSPCIG00000005877	-	75	59.701	ENSATEG00000002120	MSL3	99	60.521	Anabas_testudineus
ENSPCIG00000005877	-	75	88.023	ENSAPLG00000009050	MSL3	100	88.023	Anas_platyrhynchos
ENSPCIG00000005877	-	75	87.452	ENSACAG00000001416	MSL3	100	87.262	Anolis_carolinensis
ENSPCIG00000005877	-	75	87.380	ENSANAG00000020352	MSL3	100	86.998	Aotus_nancymaae
ENSPCIG00000005877	-	75	61.835	ENSACLG00000027641	MSL3	99	62.431	Astatotilapia_calliptera
ENSPCIG00000005877	-	74	65.493	ENSAMXG00000007892	MSL3	99	64.906	Astyanax_mexicanus
ENSPCIG00000005877	-	75	85.851	ENSBTAG00000009278	MSL3	100	85.277	Bos_taurus
ENSPCIG00000005877	-	76	86.629	ENSCJAG00000001061	MSL3	89	86.252	Callithrix_jacchus
ENSPCIG00000005877	-	75	88.337	ENSCAFG00000011611	MSL3	100	89.293	Canis_familiaris
ENSPCIG00000005877	-	75	88.337	ENSCAFG00020002360	MSL3	100	89.293	Canis_lupus_dingo
ENSPCIG00000005877	-	75	86.233	ENSCHIG00000008619	-	100	85.660	Capra_hircus
ENSPCIG00000005877	-	71	87.373	ENSTSYG00000012788	MSL3	96	86.762	Carlito_syrichta
ENSPCIG00000005877	-	75	84.895	ENSCPOG00000004692	MSL3	100	86.042	Cavia_porcellus
ENSPCIG00000005877	-	75	86.998	ENSCCAG00000035792	MSL3	100	86.616	Cebus_capucinus
ENSPCIG00000005877	-	75	85.660	ENSCATG00000044726	MSL3	100	87.380	Cercocebus_atys
ENSPCIG00000005877	-	75	86.424	ENSCLAG00000000102	-	100	85.660	Chinchilla_lanigera
ENSPCIG00000005877	-	75	85.086	ENSCSAG00000015196	MSL3	100	86.807	Chlorocebus_sabaeus
ENSPCIG00000005877	-	75	93.436	ENSCPBG00000024070	MSL3	99	93.436	Chrysemys_picta_bellii
ENSPCIG00000005877	-	60	39.688	ENSCSAVG00000009022	-	70	38.750	Ciona_savignyi
ENSPCIG00000005877	-	71	85.714	ENSCANG00000033891	MSL3	100	87.117	Colobus_angolensis_palliatus
ENSPCIG00000005877	-	75	80.762	ENSCGRG00001024399	Msl3	100	81.333	Cricetulus_griseus_chok1gshd
ENSPCIG00000005877	-	75	80.762	ENSCGRG00000011031	Msl3	100	81.333	Cricetulus_griseus_crigri
ENSPCIG00000005877	-	75	60.846	ENSCVAG00000012611	MSL3	99	61.326	Cyprinodon_variegatus
ENSPCIG00000005877	-	75	84.440	ENSDORG00000003438	Msl3	100	84.440	Dipodomys_ordii
ENSPCIG00000005877	-	55	91.398	ENSETEG00000016654	MSL3	84	92.222	Echinops_telfairi
ENSPCIG00000005877	-	74	56.425	ENSEBUG00000000515	MSL3	99	54.784	Eptatretus_burgeri
ENSPCIG00000005877	-	68	83.333	ENSEASG00005020884	MSL3	96	89.508	Equus_asinus_asinus
ENSPCIG00000005877	-	75	87.380	ENSECAG00000016699	MSL3	100	88.337	Equus_caballus
ENSPCIG00000005877	-	70	77.505	ENSEEUG00000014074	MSL3	100	75.937	Erinaceus_europaeus
ENSPCIG00000005877	-	74	69.703	ENSELUG00000021078	MSL3	99	69.517	Esox_lucius
ENSPCIG00000005877	-	75	87.954	ENSFCAG00000002794	MSL3	100	88.910	Felis_catus
ENSPCIG00000005877	-	75	55.212	ENSFHEG00000019357	MSL3	99	56.538	Fundulus_heteroclitus
ENSPCIG00000005877	-	74	54.029	ENSGMOG00000015932	MSL3	99	52.952	Gadus_morhua
ENSPCIG00000005877	-	75	92.085	ENSGALG00000041433	MSL3	99	92.085	Gallus_gallus
ENSPCIG00000005877	-	75	62.385	ENSGACG00000015038	MSL3	100	62.752	Gasterosteus_aculeatus
ENSPCIG00000005877	-	75	92.857	ENSGAGG00000021072	MSL3	99	92.857	Gopherus_agassizii
ENSPCIG00000005877	-	75	87.189	ENSGGOG00000006582	MSL3	100	87.189	Gorilla_gorilla
ENSPCIG00000005877	-	75	61.710	ENSHBUG00000008665	MSL3	99	62.268	Haplochromis_burtoni
ENSPCIG00000005877	-	75	85.277	ENSHGLG00000000202	MSL3	100	87.189	Heterocephalus_glaber_female
ENSPCIG00000005877	-	71	84.898	ENSHGLG00100016633	-	96	86.939	Heterocephalus_glaber_male
ENSPCIG00000005877	-	75	59.375	ENSHCOG00000013930	MSL3	99	59.669	Hippocampus_comes
ENSPCIG00000005877	-	74	68.657	ENSIPUG00000012531	msl3	99	67.537	Ictalurus_punctatus
ENSPCIG00000005877	-	75	87.763	ENSSTOG00000006229	MSL3	100	87.763	Ictidomys_tridecemlineatus
ENSPCIG00000005877	-	75	84.704	ENSJJAG00000007793	-	100	84.704	Jaculus_jaculus
ENSPCIG00000005877	-	75	79.167	ENSLOCG00000009931	MSL3	100	78.030	Lepisosteus_oculatus
ENSPCIG00000005877	-	75	85.660	ENSMFAG00000031868	MSL3	100	87.380	Macaca_fascicularis
ENSPCIG00000005877	-	75	85.660	ENSMMUG00000002689	MSL3	100	87.380	Macaca_mulatta
ENSPCIG00000005877	-	75	85.660	ENSMNEG00000045099	MSL3	100	87.380	Macaca_nemestrina
ENSPCIG00000005877	-	71	85.051	ENSMLEG00000038094	MSL3	100	87.117	Mandrillus_leucophaeus
ENSPCIG00000005877	-	75	60.917	ENSMAMG00000004151	MSL3	99	61.765	Mastacembelus_armatus
ENSPCIG00000005877	-	75	61.835	ENSMZEG00005004848	MSL3	99	62.431	Maylandia_zebra
ENSPCIG00000005877	-	75	91.603	ENSMGAG00000014710	MSL3	100	91.603	Meleagris_gallopavo
ENSPCIG00000005877	-	75	81.143	ENSMAUG00000013952	Msl3	100	81.714	Mesocricetus_auratus
ENSPCIG00000005877	-	75	87.380	ENSMICG00000014399	MSL3	100	87.189	Microcebus_murinus
ENSPCIG00000005877	-	75	80.000	ENSMOCG00000000342	Msl3	100	80.571	Microtus_ochrogaster
ENSPCIG00000005877	-	75	61.101	ENSMMOG00000007050	MSL3	99	61.949	Mola_mola
ENSPCIG00000005877	-	75	99.618	ENSMODG00000017350	MSL3	100	99.618	Monodelphis_domestica
ENSPCIG00000005877	-	51	43.077	ENSMODG00000002580	-	95	42.623	Monodelphis_domestica
ENSPCIG00000005877	-	75	59.853	ENSMALG00000010272	MSL3	99	60.911	Monopterus_albus
ENSPCIG00000005877	-	75	79.810	MGP_CAROLIEiJ_G0033581	Msl3	100	80.190	Mus_caroli
ENSPCIG00000005877	-	75	79.810	ENSMUSG00000031358	Msl3	100	80.190	Mus_musculus
ENSPCIG00000005877	-	75	79.619	MGP_PahariEiJ_G0032120	Msl3	100	79.278	Mus_pahari
ENSPCIG00000005877	-	75	79.810	MGP_SPRETEiJ_G0034750	Msl3	100	80.190	Mus_spretus
ENSPCIG00000005877	-	75	88.145	ENSMPUG00000002545	MSL3	100	89.101	Mustela_putorius_furo
ENSPCIG00000005877	-	71	82.828	ENSMLUG00000003852	MSL3	100	81.414	Myotis_lucifugus
ENSPCIG00000005877	-	75	83.779	ENSNGAG00000005152	-	100	83.779	Nannospalax_galili
ENSPCIG00000005877	-	75	61.495	ENSNBRG00000013071	MSL3	99	62.056	Neolamprologus_brichardi
ENSPCIG00000005877	-	75	87.189	ENSNLEG00000009057	MSL3	100	87.189	Nomascus_leucogenys
ENSPCIG00000005877	-	75	85.468	ENSODEG00000005888	-	100	86.616	Octodon_degus
ENSPCIG00000005877	-	75	61.481	ENSONIG00000012104	MSL3	100	62.037	Oreochromis_niloticus
ENSPCIG00000005877	-	75	60.036	ENSORLG00000004698	MSL3	99	61.314	Oryzias_latipes
ENSPCIG00000005877	-	75	59.854	ENSORLG00020018280	MSL3	99	61.131	Oryzias_latipes_hni
ENSPCIG00000005877	-	75	59.854	ENSORLG00015016230	MSL3	99	61.131	Oryzias_latipes_hsok
ENSPCIG00000005877	-	75	59.199	ENSOMEG00000005256	MSL3	99	59.854	Oryzias_melastigma
ENSPCIG00000005877	-	75	84.733	ENSOGAG00000005030	MSL3	100	85.878	Otolemur_garnettii
ENSPCIG00000005877	-	70	86.066	ENSOARG00000011011	MSL3	100	85.451	Ovis_aries
ENSPCIG00000005877	-	74	87.867	ENSPPAG00000039607	MSL3	99	86.680	Pan_paniscus
ENSPCIG00000005877	-	75	88.610	ENSPPRG00000024561	MSL3	99	89.575	Panthera_pardus
ENSPCIG00000005877	-	71	81.837	ENSPTIG00000017508	MSL3	97	83.027	Panthera_tigris_altaica
ENSPCIG00000005877	-	75	87.380	ENSPTRG00000021662	MSL3	100	87.380	Pan_troglodytes
ENSPCIG00000005877	-	74	73.269	ENSPKIG00000011664	MSL3	99	72.500	Paramormyrops_kingsleyae
ENSPCIG00000005877	-	71	93.890	ENSPSIG00000007595	MSL3	99	93.890	Pelodiscus_sinensis
ENSPCIG00000005877	-	75	60.577	ENSPMGG00000015421	MSL3	99	60.385	Periophthalmus_magnuspinnatus
ENSPCIG00000005877	-	75	81.905	ENSPEMG00000011959	Msl3	100	82.476	Peromyscus_maniculatus_bairdii
ENSPCIG00000005877	-	75	61.749	ENSPFOG00000016323	MSL3	99	61.426	Poecilia_formosa
ENSPCIG00000005877	-	75	61.749	ENSPLAG00000016544	MSL3	99	61.426	Poecilia_latipinna
ENSPCIG00000005877	-	75	61.749	ENSPMEG00000007675	MSL3	99	61.426	Poecilia_mexicana
ENSPCIG00000005877	-	75	61.931	ENSPREG00000009008	MSL3	99	61.609	Poecilia_reticulata
ENSPCIG00000005877	-	75	87.189	ENSPPYG00000020123	MSL3	100	87.189	Pongo_abelii
ENSPCIG00000005877	-	57	89.666	ENSPCAG00000005332	MSL3	100	77.322	Procavia_capensis
ENSPCIG00000005877	-	78	80.627	ENSPCOG00000023177	-	92	81.544	Propithecus_coquereli
ENSPCIG00000005877	-	75	86.424	ENSPCOG00000010079	-	100	87.572	Propithecus_coquereli
ENSPCIG00000005877	-	70	86.094	ENSPVAG00000005000	MSL3	100	86.708	Pteropus_vampyrus
ENSPCIG00000005877	-	75	61.835	ENSPNYG00000021904	MSL3	99	62.431	Pundamilia_nyererei
ENSPCIG00000005877	-	74	67.159	ENSPNAG00000016028	MSL3	99	66.790	Pygocentrus_nattereri
ENSPCIG00000005877	-	55	31.481	ENSRBIG00000035365	-	75	30.742	Rhinopithecus_bieti
ENSPCIG00000005877	-	55	31.481	ENSRROG00000034897	-	75	30.035	Rhinopithecus_roxellana
ENSPCIG00000005877	-	75	86.832	ENSRROG00000032523	MSL3	100	86.832	Rhinopithecus_roxellana
ENSPCIG00000005877	-	75	87.380	ENSSBOG00000007759	MSL3	100	86.998	Saimiri_boliviensis_boliviensis
ENSPCIG00000005877	-	75	93.702	ENSSHAG00000013243	MSL3	93	93.702	Sarcophilus_harrisii
ENSPCIG00000005877	-	74	74.904	ENSSFOG00015003008	msl3	99	75.287	Scleropages_formosus
ENSPCIG00000005877	-	73	54.528	ENSSFOG00015004855	MSL3	92	54.331	Scleropages_formosus
ENSPCIG00000005877	-	75	60.623	ENSSMAG00000003592	MSL3	99	61.101	Scophthalmus_maximus
ENSPCIG00000005877	-	75	61.468	ENSSLDG00000012737	MSL3	99	62.316	Seriola_lalandi_dorsalis
ENSPCIG00000005877	-	56	89.175	ENSSPUG00000003224	-	98	89.175	Sphenodon_punctatus
ENSPCIG00000005877	-	75	60.250	ENSSPAG00000007335	MSL3	99	61.719	Stegastes_partitus
ENSPCIG00000005877	-	75	87.572	ENSSSCG00000012114	MSL3	100	88.528	Sus_scrofa
ENSPCIG00000005877	-	71	92.464	ENSTGUG00000008286	MSL3	100	92.464	Taeniopygia_guttata
ENSPCIG00000005877	-	75	59.633	ENSTRUG00000012620	MSL3	99	60.478	Takifugu_rubripes
ENSPCIG00000005877	-	75	61.039	ENSTNIG00000014548	MSL3	100	61.852	Tetraodon_nigroviridis
ENSPCIG00000005877	-	75	82.218	ENSTBEG00000013679	MSL3	100	83.174	Tupaia_belangeri
ENSPCIG00000005877	-	75	76.673	ENSTTRG00000008682	MSL3	100	76.673	Tursiops_truncatus
ENSPCIG00000005877	-	71	87.475	ENSUMAG00000005111	MSL3	97	88.485	Ursus_maritimus
ENSPCIG00000005877	-	70	81.186	ENSVPAG00000008564	MSL3	100	81.186	Vicugna_pacos
ENSPCIG00000005877	-	52	89.560	ENSVVUG00000019141	MSL3	66	89.560	Vulpes_vulpes
ENSPCIG00000005877	-	75	60.000	ENSXCOG00000017534	MSL3	99	60.409	Xiphophorus_couchianus
ENSPCIG00000005877	-	75	61.931	ENSXMAG00000009066	MSL3	99	61.609	Xiphophorus_maculatus