EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPCIG00000006048 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 2778 bases
Position: chrFUWB01001790.1:466242-469019
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000007133	PABP	PF00658.18	7.3e-31	1	1
ENSPCIP00000007133	RRM_5	PF13893.6	2.8e-07	1	2
ENSPCIP00000007133	RRM_5	PF13893.6	2.8e-07	2	2
ENSPCIP00000007133	RRM_1	PF00076.22	2.3e-77	1	3
ENSPCIP00000007133	RRM_1	PF00076.22	2.3e-77	2	3
ENSPCIP00000007133	RRM_1	PF00076.22	2.3e-77	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000009053	-	2547	-	ENSPCIP00000007133	556 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000006048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000006048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000006048	-	56	39.344	ENSPCIG00000008765	SF3B4	67	39.344
ENSPCIG00000006048	-	100	83.117	ENSPCIG00000000267	-	100	83.117
ENSPCIG00000006048	-	56	36.585	ENSPCIG00000011696	ELAVL2	86	36.585
ENSPCIG00000006048	-	59	30.769	ENSPCIG00000003120	TIAL1	87	34.454
ENSPCIG00000006048	-	58	33.628	ENSPCIG00000024983	ELAVL1	98	37.037
ENSPCIG00000006048	-	99	58.571	ENSPCIG00000016154	-	96	59.429
ENSPCIG00000006048	-	56	37.079	ENSPCIG00000017807	ELAVL3	92	37.079
ENSPCIG00000006048	-	56	33.333	ENSPCIG00000001250	-	89	35.366
ENSPCIG00000006048	-	59	31.319	ENSPCIG00000013084	TIA1	69	31.319
ENSPCIG00000006048	-	97	70.301	ENSPCIG00000020674	PABPC4	99	70.221
ENSPCIG00000006048	-	98	61.085	ENSPCIG00000016995	-	55	61.085
ENSPCIG00000006048	-	97	59.319	ENSPCIG00000009392	PABPC1L	99	59.319