EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000006063 (Gene tree)
Gene ID: 110212079
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 534297 bases
Position: chrFUWB01001790.1:668010-1202306
Accession: 110212079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000007135	RRM_1	PF00076.22	1.9e-34	1	2
ENSPCIP00000007135	RRM_1	PF00076.22	1.9e-34	2	2
ENSPCIP00000007137	RRM_1	PF00076.22	1.9e-34	1	2
ENSPCIP00000007137	RRM_1	PF00076.22	1.9e-34	2	2
ENSPCIP00000007138	RRM_1	PF00076.22	4.3e-34	1	2
ENSPCIP00000007138	RRM_1	PF00076.22	4.3e-34	2	2
ENSPCIP00000007136	RRM_1	PF00076.22	1.8e-31	1	2
ENSPCIP00000007136	RRM_1	PF00076.22	1.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000009058	MSI2-203	1408	-	ENSPCIP00000007137	354 (aa)	XP_020847571	UPI000A28B945
ENSPCIT00000009060	MSI2-204	1656	-	ENSPCIP00000007138	447 (aa)	-	-
ENSPCIT00000009056	MSI2-201	1377	-	ENSPCIP00000007135	354 (aa)	-	-
ENSPCIT00000009057	MSI2-202	1718	-	ENSPCIP00000007136	355 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000006063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000006063's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000006063	MSI2	59	40.789	ENSPCIG00000013648	RBM38	50	40.789
ENSPCIG00000006063	MSI2	51	42.857	ENSPCIG00000009814	-	64	42.857
ENSPCIG00000006063	MSI2	50	42.105	ENSPCIG00000011156	DAZAP1	51	42.105
ENSPCIG00000006063	MSI2	53	48.936	ENSPCIG00000003089	-	59	45.455
ENSPCIG00000006063	MSI2	66	32.099	ENSPCIG00000013084	TIA1	54	37.931
ENSPCIG00000006063	MSI2	53	46.907	ENSPCIG00000003112	HNRNPD	61	46.154
ENSPCIG00000006063	MSI2	94	71.513	ENSPCIG00000023832	MSI1	100	70.000
ENSPCIG00000006063	MSI2	76	32.143	ENSPCIG00000007956	TARDBP	64	30.303
ENSPCIG00000006063	MSI2	53	47.059	ENSPCIG00000002735	HNRNPAB	53	45.854

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000006063	MSI2	100	90.395	ENSG00000153944	MSI2	100	98.408	Homo_sapiens
ENSPCIG00000006063	MSI2	100	86.479	ENSAPOG00000001658	msi2a	100	86.072	Acanthochromis_polyacanthus
ENSPCIG00000006063	MSI2	94	96.096	ENSAMEG00000002697	MSI2	99	98.408	Ailuropoda_melanoleuca
ENSPCIG00000006063	MSI2	100	73.500	ENSACIG00000009475	msi2a	96	76.517	Amphilophus_citrinellus
ENSPCIG00000006063	MSI2	54	78.667	ENSAOCG00000014822	msi2a	69	78.667	Amphiprion_ocellaris
ENSPCIG00000006063	MSI2	100	86.479	ENSAPEG00000007706	msi2a	100	86.072	Amphiprion_percula
ENSPCIG00000006063	MSI2	94	85.526	ENSATEG00000003301	-	100	88.176	Anabas_testudineus
ENSPCIG00000006063	MSI2	100	86.479	ENSATEG00000010498	msi2a	100	86.072	Anabas_testudineus
ENSPCIG00000006063	MSI2	94	74.221	ENSACAG00000005452	MSI2	68	98.913	Anolis_carolinensis
ENSPCIG00000006063	MSI2	100	90.395	ENSANAG00000037827	MSI2	100	90.395	Aotus_nancymaae
ENSPCIG00000006063	MSI2	100	86.197	ENSACLG00000007752	msi2a	100	85.794	Astatotilapia_calliptera
ENSPCIG00000006063	MSI2	100	84.181	ENSAMXG00000010474	msi2b	97	89.490	Astyanax_mexicanus
ENSPCIG00000006063	MSI2	100	88.169	ENSAMXG00000032796	msi2a	100	85.311	Astyanax_mexicanus
ENSPCIG00000006063	MSI2	94	90.390	ENSBTAG00000004406	MSI2	97	92.357	Bos_taurus
ENSPCIG00000006063	MSI2	66	60.643	WBGene00003423	msi-1	76	60.643	Caenorhabditis_elegans
ENSPCIG00000006063	MSI2	100	90.395	ENSCJAG00000013998	MSI2	100	90.395	Callithrix_jacchus
ENSPCIG00000006063	MSI2	99	94.350	ENSCAFG00020025620	MSI2	90	94.350	Canis_lupus_dingo
ENSPCIG00000006063	MSI2	100	88.983	ENSCHIG00000016580	MSI2	100	88.983	Capra_hircus
ENSPCIG00000006063	MSI2	94	85.714	ENSCPOG00000034042	MSI2	99	88.333	Cavia_porcellus
ENSPCIG00000006063	MSI2	100	90.395	ENSCCAG00000033927	MSI2	100	90.395	Cebus_capucinus
ENSPCIG00000006063	MSI2	100	89.548	ENSCATG00000040879	MSI2	92	98.222	Cercocebus_atys
ENSPCIG00000006063	MSI2	100	95.480	ENSCLAG00000014325	MSI2	100	95.480	Chinchilla_lanigera
ENSPCIG00000006063	MSI2	100	90.395	ENSCSAG00000005633	MSI2	100	90.395	Chlorocebus_sabaeus
ENSPCIG00000006063	MSI2	70	96.078	ENSCHOG00000008660	MSI2	83	96.078	Choloepus_hoffmanni
ENSPCIG00000006063	MSI2	94	93.355	ENSCPBG00000009942	MSI2	96	93.688	Chrysemys_picta_bellii
ENSPCIG00000006063	MSI2	58	72.000	ENSCING00000018579	-	97	49.791	Ciona_intestinalis
ENSPCIG00000006063	MSI2	60	66.667	ENSCSAVG00000010397	-	95	52.493	Ciona_savignyi
ENSPCIG00000006063	MSI2	94	96.084	ENSCANG00000036414	MSI2	100	98.408	Colobus_angolensis_palliatus
ENSPCIG00000006063	MSI2	100	89.859	ENSCGRG00001013330	Msi2	100	89.859	Cricetulus_griseus_chok1gshd
ENSPCIG00000006063	MSI2	94	95.808	ENSCGRG00000003141	Msi2	100	98.095	Cricetulus_griseus_crigri
ENSPCIG00000006063	MSI2	100	75.141	ENSCSEG00000003266	-	100	75.141	Cynoglossus_semilaevis
ENSPCIG00000006063	MSI2	77	68.868	ENSCSEG00000013557	msi2a	83	67.453	Cynoglossus_semilaevis
ENSPCIG00000006063	MSI2	53	75.543	ENSCSEG00000013549	msi2a	100	75.543	Cynoglossus_semilaevis
ENSPCIG00000006063	MSI2	100	86.197	ENSCVAG00000017075	msi2a	100	85.794	Cyprinodon_variegatus
ENSPCIG00000006063	MSI2	93	87.576	ENSDARG00000032614	msi2b	100	99.010	Danio_rerio
ENSPCIG00000006063	MSI2	100	78.283	ENSDARG00000033901	msi2a	97	81.067	Danio_rerio
ENSPCIG00000006063	MSI2	94	90.127	ENSDNOG00000014501	MSI2	100	92.810	Dasypus_novemcinctus
ENSPCIG00000006063	MSI2	83	80.930	ENSDORG00000005394	Msi2	84	74.884	Dipodomys_ordii
ENSPCIG00000006063	MSI2	97	58.678	FBgn0260943	Rbp6	88	68.056	Drosophila_melanogaster
ENSPCIG00000006063	MSI2	62	75.658	ENSETEG00000012450	-	64	75.658	Echinops_telfairi
ENSPCIG00000006063	MSI2	89	68.671	ENSEBUG00000006732	msi2a	87	68.810	Eptatretus_burgeri
ENSPCIG00000006063	MSI2	94	92.049	ENSEASG00005002965	MSI2	97	90.571	Equus_asinus_asinus
ENSPCIG00000006063	MSI2	100	98.023	ENSECAG00000011435	MSI2	100	98.023	Equus_caballus
ENSPCIG00000006063	MSI2	81	77.491	ENSEEUG00000007810	MSI2	100	77.491	Erinaceus_europaeus
ENSPCIG00000006063	MSI2	100	83.333	ENSELUG00000011747	msi2a	100	83.333	Esox_lucius
ENSPCIG00000006063	MSI2	100	86.034	ENSELUG00000001361	msi2b	100	86.034	Esox_lucius
ENSPCIG00000006063	MSI2	53	78.205	ENSFCAG00000033787	-	82	78.205	Felis_catus
ENSPCIG00000006063	MSI2	100	90.395	ENSFCAG00000041686	MSI2	96	94.505	Felis_catus
ENSPCIG00000006063	MSI2	94	96.096	ENSFDAG00000016118	MSI2	100	98.408	Fukomys_damarensis
ENSPCIG00000006063	MSI2	100	86.197	ENSFHEG00000000084	msi2a	96	95.395	Fundulus_heteroclitus
ENSPCIG00000006063	MSI2	51	96.154	ENSGMOG00000007596	-	100	96.154	Gadus_morhua
ENSPCIG00000006063	MSI2	100	95.480	ENSGALG00000005567	MSI2	100	95.480	Gallus_gallus
ENSPCIG00000006063	MSI2	96	74.277	ENSGAFG00000006974	msi2a	90	96.026	Gambusia_affinis
ENSPCIG00000006063	MSI2	94	99.013	ENSGAGG00000016542	MSI2	100	99.013	Gopherus_agassizii
ENSPCIG00000006063	MSI2	94	96.084	ENSGGOG00000013182	MSI2	100	98.408	Gorilla_gorilla
ENSPCIG00000006063	MSI2	100	86.197	ENSHBUG00000020800	msi2a	100	85.794	Haplochromis_burtoni
ENSPCIG00000006063	MSI2	100	86.723	ENSHGLG00000012444	MSI2	100	86.723	Heterocephalus_glaber_female
ENSPCIG00000006063	MSI2	74	98.551	ENSHGLG00100003744	MSI2	100	98.551	Heterocephalus_glaber_male
ENSPCIG00000006063	MSI2	97	83.815	ENSHCOG00000000266	msi2a	96	84.789	Hippocampus_comes
ENSPCIG00000006063	MSI2	77	79.336	ENSHCOG00000017241	-	98	64.838	Hippocampus_comes
ENSPCIG00000006063	MSI2	96	87.390	ENSIPUG00000003732	msi2b	100	80.226	Ictalurus_punctatus
ENSPCIG00000006063	MSI2	100	81.921	ENSIPUG00000021097	msi2a	100	81.638	Ictalurus_punctatus
ENSPCIG00000006063	MSI2	94	85.714	ENSSTOG00000007884	MSI2	99	88.333	Ictidomys_tridecemlineatus
ENSPCIG00000006063	MSI2	77	85.581	ENSJJAG00000006292	-	100	87.923	Jaculus_jaculus
ENSPCIG00000006063	MSI2	100	84.463	ENSKMAG00000009494	msi2a	100	84.463	Kryptolebias_marmoratus
ENSPCIG00000006063	MSI2	100	81.921	ENSLBEG00000007061	msi2a	88	96.296	Labrus_bergylta
ENSPCIG00000006063	MSI2	94	67.622	ENSLBEG00000026223	-	100	69.501	Labrus_bergylta
ENSPCIG00000006063	MSI2	100	81.266	ENSLOCG00000004675	msi2b	100	87.805	Lepisosteus_oculatus
ENSPCIG00000006063	MSI2	94	96.084	ENSMFAG00000003775	MSI2	100	98.408	Macaca_fascicularis
ENSPCIG00000006063	MSI2	94	96.084	ENSMMUG00000002069	MSI2	100	98.408	Macaca_mulatta
ENSPCIG00000006063	MSI2	100	90.395	ENSMNEG00000045275	MSI2	100	90.395	Macaca_nemestrina
ENSPCIG00000006063	MSI2	94	96.084	ENSMLEG00000033888	MSI2	100	98.408	Mandrillus_leucophaeus
ENSPCIG00000006063	MSI2	100	83.611	ENSMAMG00000010503	msi2a	100	83.898	Mastacembelus_armatus
ENSPCIG00000006063	MSI2	98	85.387	ENSMAMG00000002488	-	99	95.364	Mastacembelus_armatus
ENSPCIG00000006063	MSI2	100	85.876	ENSMZEG00005007676	msi2a	100	85.876	Maylandia_zebra
ENSPCIG00000006063	MSI2	100	94.930	ENSMAUG00000003862	Msi2	100	94.930	Mesocricetus_auratus
ENSPCIG00000006063	MSI2	100	72.113	ENSMICG00000032913	-	100	70.986	Microcebus_murinus
ENSPCIG00000006063	MSI2	100	90.395	ENSMICG00000013598	-	100	90.395	Microcebus_murinus
ENSPCIG00000006063	MSI2	100	95.198	ENSMOCG00000005820	Msi2	100	95.198	Microtus_ochrogaster
ENSPCIG00000006063	MSI2	90	81.763	ENSMMOG00000008348	msi2a	97	80.663	Mola_mola
ENSPCIG00000006063	MSI2	74	100.000	ENSMODG00000014790	MSI2	100	100.000	Monodelphis_domestica
ENSPCIG00000006063	MSI2	100	95.425	ENSMALG00000000071	msi2a	100	95.425	Monopterus_albus
ENSPCIG00000006063	MSI2	100	95.198	MGP_CAROLIEiJ_G0016948	Msi2	100	99.115	Mus_caroli
ENSPCIG00000006063	MSI2	100	95.198	ENSMUSG00000069769	Msi2	100	99.115	Mus_musculus
ENSPCIG00000006063	MSI2	100	95.198	MGP_PahariEiJ_G0018079	Msi2	100	99.115	Mus_pahari
ENSPCIG00000006063	MSI2	100	95.198	MGP_SPRETEiJ_G0017795	Msi2	100	99.115	Mus_spretus
ENSPCIG00000006063	MSI2	94	90.691	ENSMPUG00000015377	MSI2	97	92.675	Mustela_putorius_furo
ENSPCIG00000006063	MSI2	94	90.390	ENSMLUG00000007865	MSI2	97	92.675	Myotis_lucifugus
ENSPCIG00000006063	MSI2	100	95.198	ENSNGAG00000017807	Msi2	100	95.198	Nannospalax_galili
ENSPCIG00000006063	MSI2	100	81.638	ENSNBRG00000014596	msi2a	92	96.053	Neolamprologus_brichardi
ENSPCIG00000006063	MSI2	94	95.925	ENSNLEG00000008059	MSI2	100	98.714	Nomascus_leucogenys
ENSPCIG00000006063	MSI2	62	88.158	ENSOPRG00000000872	-	64	88.158	Ochotona_princeps
ENSPCIG00000006063	MSI2	100	95.480	ENSODEG00000011974	MSI2	100	95.480	Octodon_degus
ENSPCIG00000006063	MSI2	54	96.026	ENSONIG00000001972	msi2a	84	96.026	Oreochromis_niloticus
ENSPCIG00000006063	MSI2	92	94.583	ENSOANG00000005667	MSI2	97	78.795	Ornithorhynchus_anatinus
ENSPCIG00000006063	MSI2	94	90.691	ENSOCUG00000010440	MSI2	97	92.675	Oryctolagus_cuniculus
ENSPCIG00000006063	MSI2	100	85.070	ENSORLG00000009671	msi2a	100	85.070	Oryzias_latipes
ENSPCIG00000006063	MSI2	94	86.228	ENSORLG00020021556	msi2a	95	87.461	Oryzias_latipes_hni
ENSPCIG00000006063	MSI2	100	85.070	ENSORLG00015004592	msi2a	100	85.070	Oryzias_latipes_hsok
ENSPCIG00000006063	MSI2	100	78.535	ENSOMEG00000000146	msi2a	97	87.937	Oryzias_melastigma
ENSPCIG00000006063	MSI2	94	86.486	ENSOGAG00000005621	MSI2	99	88.217	Otolemur_garnettii
ENSPCIG00000006063	MSI2	94	96.084	ENSPPAG00000037697	MSI2	100	98.408	Pan_paniscus
ENSPCIG00000006063	MSI2	94	90.691	ENSPPRG00000001848	MSI2	92	98.222	Panthera_pardus
ENSPCIG00000006063	MSI2	94	95.925	ENSPTIG00000021678	MSI2	96	98.714	Panthera_tigris_altaica
ENSPCIG00000006063	MSI2	68	79.498	ENSPTIG00000021873	-	91	79.498	Panthera_tigris_altaica
ENSPCIG00000006063	MSI2	94	96.084	ENSPTRG00000009437	MSI2	100	98.408	Pan_troglodytes
ENSPCIG00000006063	MSI2	100	90.395	ENSPANG00000022319	MSI2	100	90.395	Papio_anubis
ENSPCIG00000006063	MSI2	100	79.474	ENSPKIG00000007038	-	100	77.628	Paramormyrops_kingsleyae
ENSPCIG00000006063	MSI2	100	81.481	ENSPSIG00000008618	MSI2	97	85.714	Pelodiscus_sinensis
ENSPCIG00000006063	MSI2	100	81.356	ENSPMGG00000005888	msi2a	100	81.356	Periophthalmus_magnuspinnatus
ENSPCIG00000006063	MSI2	53	94.286	ENSPFOG00000019337	MSI2	92	94.286	Poecilia_formosa
ENSPCIG00000006063	MSI2	54	92.308	ENSPLAG00000000436	msi2a	76	92.958	Poecilia_latipinna
ENSPCIG00000006063	MSI2	54	81.818	ENSPMEG00000013247	msi2a	80	81.818	Poecilia_mexicana
ENSPCIG00000006063	MSI2	99	79.661	ENSPREG00000000881	msi2a	99	79.661	Poecilia_reticulata
ENSPCIG00000006063	MSI2	94	85.606	ENSPPYG00000008244	-	100	88.672	Pongo_abelii
ENSPCIG00000006063	MSI2	75	62.121	ENSPCAG00000010552	MSI2	100	64.453	Procavia_capensis
ENSPCIG00000006063	MSI2	94	81.505	ENSPVAG00000017053	MSI2	100	84.566	Pteropus_vampyrus
ENSPCIG00000006063	MSI2	100	85.876	ENSPNYG00000018393	msi2a	100	85.876	Pundamilia_nyererei
ENSPCIG00000006063	MSI2	100	83.662	ENSPNAG00000000844	msi2b	100	80.508	Pygocentrus_nattereri
ENSPCIG00000006063	MSI2	100	87.887	ENSPNAG00000014957	msi2a	100	84.746	Pygocentrus_nattereri
ENSPCIG00000006063	MSI2	94	89.803	ENSRNOG00000025338	Msi2	100	92.568	Rattus_norvegicus
ENSPCIG00000006063	MSI2	94	96.084	ENSSBOG00000026425	MSI2	100	98.408	Saimiri_boliviensis_boliviensis
ENSPCIG00000006063	MSI2	94	97.289	ENSSHAG00000008672	MSI2	100	99.682	Sarcophilus_harrisii
ENSPCIG00000006063	MSI2	100	64.268	ENSSFOG00015012168	msi2b	74	88.208	Scleropages_formosus
ENSPCIG00000006063	MSI2	94	82.282	ENSSFOG00015021687	-	97	81.210	Scleropages_formosus
ENSPCIG00000006063	MSI2	100	86.479	ENSSMAG00000018484	msi2a	100	86.072	Scophthalmus_maximus
ENSPCIG00000006063	MSI2	100	86.479	ENSSDUG00000014507	msi2a	100	86.072	Seriola_dumerili
ENSPCIG00000006063	MSI2	100	81.638	ENSSDUG00000021968	-	99	94.702	Seriola_dumerili
ENSPCIG00000006063	MSI2	100	81.921	ENSSLDG00000017172	msi2a	100	81.921	Seriola_lalandi_dorsalis
ENSPCIG00000006063	MSI2	54	96.835	ENSSPUG00000000913	-	94	96.835	Sphenodon_punctatus
ENSPCIG00000006063	MSI2	100	76.880	ENSSPAG00000017793	msi2a	100	80.226	Stegastes_partitus
ENSPCIG00000006063	MSI2	100	98.023	ENSSSCG00000038505	MSI2	100	98.023	Sus_scrofa
ENSPCIG00000006063	MSI2	74	98.551	ENSTGUG00000008452	MSI2	100	98.551	Taeniopygia_guttata
ENSPCIG00000006063	MSI2	100	80.886	ENSTRUG00000021248	msi2a	100	80.886	Takifugu_rubripes
ENSPCIG00000006063	MSI2	68	80.992	ENSTBEG00000001241	MSI2	73	80.992	Tupaia_belangeri
ENSPCIG00000006063	MSI2	94	80.682	ENSTTRG00000002189	MSI2	100	83.203	Tursiops_truncatus
ENSPCIG00000006063	MSI2	94	90.691	ENSUAMG00000000700	MSI2	92	98.222	Ursus_americanus
ENSPCIG00000006063	MSI2	94	79.016	ENSUMAG00000000505	MSI2	100	83.224	Ursus_maritimus
ENSPCIG00000006063	MSI2	51	84.066	ENSVPAG00000006837	-	62	84.066	Vicugna_pacos
ENSPCIG00000006063	MSI2	100	95.480	ENSVVUG00000011783	MSI2	100	95.480	Vulpes_vulpes
ENSPCIG00000006063	MSI2	100	77.157	ENSXCOG00000006113	msi2a	100	76.104	Xiphophorus_couchianus
ENSPCIG00000006063	MSI2	100	86.197	ENSXMAG00000000608	msi2a	100	85.794	Xiphophorus_maculatus