EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000006076 (Gene tree)
Gene ID: 110212075
Gene Symbol: -
Alias: -
Full Name: serine and arginine rich splicing factor 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 2051 bases
Position: chrFUWB01001790.1:1598566-1600616
Accession: 110212075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000007153	RRM_1	PF00076.22	1.8e-33	1	2
ENSPCIP00000007153	RRM_1	PF00076.22	1.8e-33	2	2
ENSPCIP00000007154	RRM_1	PF00076.22	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000009076	-	759	-	ENSPCIP00000007153	249 (aa)	XP_020847556	UPI00020F600F
ENSPCIT00000009077	-	1074	-	ENSPCIP00000007154	354 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000006076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000006076's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000006076	-	65	46.988	ENSPCIG00000011877	SRSF5	61	44.910
ENSPCIG00000006076	-	78	67.876	ENSPCIG00000025998	SRSF9	71	71.823
ENSPCIG00000006076	-	78	40.488	ENSPCIG00000003820	SRSF6	58	41.905

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000006076	-	100	99.197	ENSG00000136450	SRSF1	100	100.000	Homo_sapiens
ENSPCIG00000006076	-	78	91.753	ENSAPOG00000002748	-	78	89.175	Acanthochromis_polyacanthus
ENSPCIG00000006076	-	80	91.133	ENSAPOG00000008542	-	81	90.640	Acanthochromis_polyacanthus
ENSPCIG00000006076	-	100	96.386	ENSAMEG00000002635	SRSF1	100	96.386	Ailuropoda_melanoleuca
ENSPCIG00000006076	-	78	91.753	ENSACIG00000008091	srsf1a	83	90.206	Amphilophus_citrinellus
ENSPCIG00000006076	-	78	92.268	ENSAOCG00000010671	-	83	90.206	Amphiprion_ocellaris
ENSPCIG00000006076	-	80	91.133	ENSAOCG00000000337	-	82	90.640	Amphiprion_ocellaris
ENSPCIG00000006076	-	80	91.133	ENSAPEG00000023352	-	81	90.640	Amphiprion_percula
ENSPCIG00000006076	-	78	92.268	ENSAPEG00000009915	-	83	90.206	Amphiprion_percula
ENSPCIG00000006076	-	78	92.268	ENSATEG00000022403	-	77	90.206	Anabas_testudineus
ENSPCIG00000006076	-	82	87.745	ENSATEG00000021567	-	81	87.374	Anabas_testudineus
ENSPCIG00000006076	-	100	98.394	ENSACAG00000005542	-	100	98.394	Anolis_carolinensis
ENSPCIG00000006076	-	99	99.190	ENSANAG00000020583	-	99	98.611	Aotus_nancymaae
ENSPCIG00000006076	-	81	71.144	ENSANAG00000025417	-	75	70.707	Aotus_nancymaae
ENSPCIG00000006076	-	94	92.469	ENSAMXG00000035996	srsf1a	79	93.970	Astyanax_mexicanus
ENSPCIG00000006076	-	54	80.000	ENSAMXG00000024373	-	72	77.070	Astyanax_mexicanus
ENSPCIG00000006076	-	100	99.197	ENSBTAG00000014766	SRSF1	100	99.197	Bos_taurus
ENSPCIG00000006076	-	99	99.190	ENSCJAG00000041713	-	99	98.611	Callithrix_jacchus
ENSPCIG00000006076	-	79	89.848	ENSCJAG00000008111	-	88	86.869	Callithrix_jacchus
ENSPCIG00000006076	-	99	99.190	ENSCAFG00000017430	SRSF1	97	99.190	Canis_familiaris
ENSPCIG00000006076	-	99	99.190	ENSCAFG00020025632	-	97	99.190	Canis_lupus_dingo
ENSPCIG00000006076	-	100	99.197	ENSCHIG00000010787	SRSF1	100	99.197	Capra_hircus
ENSPCIG00000006076	-	99	99.190	ENSTSYG00000013899	-	99	98.611	Carlito_syrichta
ENSPCIG00000006076	-	100	99.197	ENSCPOG00000032681	-	100	99.197	Cavia_porcellus
ENSPCIG00000006076	-	100	99.197	ENSCCAG00000029484	-	100	99.197	Cebus_capucinus
ENSPCIG00000006076	-	99	99.190	ENSCATG00000042294	-	99	98.611	Cercocebus_atys
ENSPCIG00000006076	-	100	99.197	ENSCLAG00000014707	-	100	99.197	Chinchilla_lanigera
ENSPCIG00000006076	-	99	98.381	ENSCSAG00000005642	-	97	98.381	Chlorocebus_sabaeus
ENSPCIG00000006076	-	100	99.197	ENSCHOG00000001899	SRSF1	100	99.197	Choloepus_hoffmanni
ENSPCIG00000006076	-	100	98.795	ENSCPBG00000009851	-	100	98.795	Chrysemys_picta_bellii
ENSPCIG00000006076	-	99	99.190	ENSCANG00000029726	-	99	98.611	Colobus_angolensis_palliatus
ENSPCIG00000006076	-	99	99.190	ENSCGRG00001000670	Srsf1	97	99.190	Cricetulus_griseus_chok1gshd
ENSPCIG00000006076	-	100	99.197	ENSCGRG00000005590	Srsf1	100	99.197	Cricetulus_griseus_crigri
ENSPCIG00000006076	-	78	91.837	ENSCSEG00000014272	-	78	92.347	Cynoglossus_semilaevis
ENSPCIG00000006076	-	79	84.906	ENSCSEG00000009973	-	81	83.962	Cynoglossus_semilaevis
ENSPCIG00000006076	-	78	92.268	ENSCVAG00000018617	-	78	90.206	Cyprinodon_variegatus
ENSPCIG00000006076	-	78	89.744	ENSCVAG00000005458	-	91	89.071	Cyprinodon_variegatus
ENSPCIG00000006076	-	78	90.686	ENSDARG00000057691	srsf1a	99	89.005	Danio_rerio
ENSPCIG00000006076	-	99	96.748	ENSDARG00000017843	srsf1b	99	96.748	Danio_rerio
ENSPCIG00000006076	-	99	99.190	ENSDNOG00000011737	-	97	99.190	Dasypus_novemcinctus
ENSPCIG00000006076	-	100	99.197	ENSDORG00000015082	Srsf1	100	99.197	Dipodomys_ordii
ENSPCIG00000006076	-	74	97.838	ENSETEG00000005349	-	63	97.838	Echinops_telfairi
ENSPCIG00000006076	-	99	99.190	ENSEASG00005002922	-	97	99.190	Equus_asinus_asinus
ENSPCIG00000006076	-	100	99.197	ENSECAG00000016654	SRSF1	100	99.197	Equus_caballus
ENSPCIG00000006076	-	74	98.919	ENSEEUG00000009255	-	63	98.919	Erinaceus_europaeus
ENSPCIG00000006076	-	78	93.333	ENSELUG00000021646	srsf1a	77	90.256	Esox_lucius
ENSPCIG00000006076	-	99	99.190	ENSFCAG00000002250	-	97	99.190	Felis_catus
ENSPCIG00000006076	-	99	81.781	ENSFALG00000005062	-	97	81.781	Ficedula_albicollis
ENSPCIG00000006076	-	100	99.197	ENSFDAG00000010646	-	100	99.197	Fukomys_damarensis
ENSPCIG00000006076	-	78	92.268	ENSFHEG00000003174	srsf1a	83	90.206	Fundulus_heteroclitus
ENSPCIG00000006076	-	80	89.447	ENSGMOG00000014787	-	80	86.598	Gadus_morhua
ENSPCIG00000006076	-	100	98.795	ENSGALG00000005525	SRSF1	100	98.795	Gallus_gallus
ENSPCIG00000006076	-	80	86.869	ENSGACG00000020621	srsf1b	80	84.848	Gasterosteus_aculeatus
ENSPCIG00000006076	-	99	98.785	ENSGAGG00000022965	-	97	98.785	Gopherus_agassizii
ENSPCIG00000006076	-	99	99.190	ENSGGOG00000004386	SRSF1	99	98.611	Gorilla_gorilla
ENSPCIG00000006076	-	78	91.753	ENSHBUG00000016788	srsf1a	80	90.206	Haplochromis_burtoni
ENSPCIG00000006076	-	87	99.074	ENSHGLG00000000669	-	100	99.074	Heterocephalus_glaber_female
ENSPCIG00000006076	-	87	99.074	ENSHGLG00000000600	-	100	99.074	Heterocephalus_glaber_female
ENSPCIG00000006076	-	100	99.197	ENSHGLG00100016906	-	100	99.197	Heterocephalus_glaber_male
ENSPCIG00000006076	-	78	87.817	ENSHCOG00000018918	srsf1a	77	87.817	Hippocampus_comes
ENSPCIG00000006076	-	100	95.984	ENSIPUG00000008750	srsf1b	100	95.984	Ictalurus_punctatus
ENSPCIG00000006076	-	94	92.050	ENSIPUG00000017039	srsf1a	79	94.472	Ictalurus_punctatus
ENSPCIG00000006076	-	100	99.197	ENSSTOG00000000243	-	100	99.197	Ictidomys_tridecemlineatus
ENSPCIG00000006076	-	100	99.197	ENSJJAG00000000102	-	100	99.197	Jaculus_jaculus
ENSPCIG00000006076	-	51	89.844	ENSJJAG00000014464	-	95	89.062	Jaculus_jaculus
ENSPCIG00000006076	-	78	92.268	ENSKMAG00000019232	srsf1a	78	89.175	Kryptolebias_marmoratus
ENSPCIG00000006076	-	78	91.237	ENSLBEG00000020864	-	83	89.175	Labrus_bergylta
ENSPCIG00000006076	-	80	84.500	ENSLBEG00000015294	-	80	85.500	Labrus_bergylta
ENSPCIG00000006076	-	78	94.872	ENSLACG00000014160	srsf1a	73	93.846	Latimeria_chalumnae
ENSPCIG00000006076	-	100	97.189	ENSLOCG00000005994	srsf1a	100	97.189	Lepisosteus_oculatus
ENSPCIG00000006076	-	100	99.197	ENSLAFG00000025743	SRSF1	100	99.197	Loxodonta_africana
ENSPCIG00000006076	-	100	99.197	ENSMFAG00000040003	-	100	99.197	Macaca_fascicularis
ENSPCIG00000006076	-	99	99.190	ENSMMUG00000004725	SRSF1	99	98.611	Macaca_mulatta
ENSPCIG00000006076	-	99	96.356	ENSMMUG00000003260	-	97	96.356	Macaca_mulatta
ENSPCIG00000006076	-	99	99.190	ENSMNEG00000027680	-	99	98.611	Macaca_nemestrina
ENSPCIG00000006076	-	99	95.951	ENSMNEG00000015983	-	97	95.951	Macaca_nemestrina
ENSPCIG00000006076	-	100	91.566	ENSMLEG00000015243	-	77	91.414	Mandrillus_leucophaeus
ENSPCIG00000006076	-	100	99.197	ENSMLEG00000040509	SRSF1	100	99.197	Mandrillus_leucophaeus
ENSPCIG00000006076	-	80	94.949	ENSMAMG00000019691	-	81	92.424	Mastacembelus_armatus
ENSPCIG00000006076	-	80	89.394	ENSMAMG00000019687	-	80	87.374	Mastacembelus_armatus
ENSPCIG00000006076	-	78	92.268	ENSMAMG00000018454	-	78	90.206	Mastacembelus_armatus
ENSPCIG00000006076	-	100	99.197	ENSMAUG00000021845	Srsf1	100	99.197	Mesocricetus_auratus
ENSPCIG00000006076	-	99	99.190	ENSMICG00000013639	-	99	98.611	Microcebus_murinus
ENSPCIG00000006076	-	100	99.197	ENSMOCG00000001996	Srsf1	100	99.197	Microtus_ochrogaster
ENSPCIG00000006076	-	78	90.722	ENSMMOG00000014354	srsf1a	83	88.660	Mola_mola
ENSPCIG00000006076	-	74	100.000	ENSMODG00000014781	-	63	100.000	Monodelphis_domestica
ENSPCIG00000006076	-	82	81.463	ENSMALG00000007763	-	79	81.313	Monopterus_albus
ENSPCIG00000006076	-	78	91.753	ENSMALG00000017129	-	75	88.660	Monopterus_albus
ENSPCIG00000006076	-	100	99.197	MGP_CAROLIEiJ_G0016943	Srsf1	100	99.197	Mus_caroli
ENSPCIG00000006076	-	100	99.197	ENSMUSG00000018379	Srsf1	100	99.197	Mus_musculus
ENSPCIG00000006076	-	100	99.197	MGP_PahariEiJ_G0018074	Srsf1	100	99.197	Mus_pahari
ENSPCIG00000006076	-	100	99.197	MGP_SPRETEiJ_G0017790	Srsf1	100	99.197	Mus_spretus
ENSPCIG00000006076	-	100	99.197	ENSMPUG00000015369	SRSF1	100	99.197	Mustela_putorius_furo
ENSPCIG00000006076	-	82	88.725	ENSMLUG00000023995	-	79	88.384	Myotis_lucifugus
ENSPCIG00000006076	-	100	99.197	ENSMLUG00000011040	SRSF1	100	99.197	Myotis_lucifugus
ENSPCIG00000006076	-	100	99.197	ENSNGAG00000011395	Srsf1	100	99.197	Nannospalax_galili
ENSPCIG00000006076	-	100	81.124	ENSNBRG00000008041	srsf1b	80	82.323	Neolamprologus_brichardi
ENSPCIG00000006076	-	99	99.190	ENSNLEG00000008088	-	99	98.611	Nomascus_leucogenys
ENSPCIG00000006076	-	51	100.000	ENSMEUG00000002783	-	100	100.000	Notamacropus_eugenii
ENSPCIG00000006076	-	74	98.913	ENSOPRG00000001234	-	100	98.913	Ochotona_princeps
ENSPCIG00000006076	-	100	98.795	ENSODEG00000011481	-	100	98.795	Octodon_degus
ENSPCIG00000006076	-	96	90.756	ENSONIG00000004860	-	81	91.414	Oreochromis_niloticus
ENSPCIG00000006076	-	78	91.753	ENSONIG00000013160	-	77	90.206	Oreochromis_niloticus
ENSPCIG00000006076	-	100	69.565	ENSOCUG00000010894	-	77	71.429	Oryctolagus_cuniculus
ENSPCIG00000006076	-	78	92.268	ENSORLG00000004580	srsf1a	78	90.206	Oryzias_latipes
ENSPCIG00000006076	-	78	92.268	ENSORLG00020009456	srsf1a	83	90.206	Oryzias_latipes_hni
ENSPCIG00000006076	-	78	92.268	ENSORLG00015014384	srsf1a	83	90.206	Oryzias_latipes_hsok
ENSPCIG00000006076	-	71	90.395	ENSOMEG00000004106	srsf1a	71	88.136	Oryzias_melastigma
ENSPCIG00000006076	-	100	99.197	ENSOGAG00000025950	-	100	99.197	Otolemur_garnettii
ENSPCIG00000006076	-	100	94.378	ENSOARG00000008323	SRSF1	100	94.378	Ovis_aries
ENSPCIG00000006076	-	100	99.197	ENSPPAG00000043403	-	100	99.197	Pan_paniscus
ENSPCIG00000006076	-	100	99.197	ENSPPRG00000004238	-	100	99.197	Panthera_pardus
ENSPCIG00000006076	-	99	99.190	ENSPTRG00000049077	SRSF1	99	98.611	Pan_troglodytes
ENSPCIG00000006076	-	100	75.100	ENSPANG00000030275	-	75	97.638	Papio_anubis
ENSPCIG00000006076	-	99	99.190	ENSPANG00000022305	-	99	98.611	Papio_anubis
ENSPCIG00000006076	-	100	95.984	ENSPKIG00000012857	srsf1b	100	95.984	Paramormyrops_kingsleyae
ENSPCIG00000006076	-	99	95.122	ENSPKIG00000007204	srsf1a	99	95.122	Paramormyrops_kingsleyae
ENSPCIG00000006076	-	80	90.000	ENSPSIG00000009000	-	78	97.931	Pelodiscus_sinensis
ENSPCIG00000006076	-	96	84.583	ENSPMGG00000005467	-	78	85.052	Periophthalmus_magnuspinnatus
ENSPCIG00000006076	-	78	89.899	ENSPMGG00000013112	-	79	92.432	Periophthalmus_magnuspinnatus
ENSPCIG00000006076	-	100	99.197	ENSPEMG00000021416	Srsf1	100	99.197	Peromyscus_maniculatus_bairdii
ENSPCIG00000006076	-	80	89.394	ENSPFOG00000018325	-	70	89.691	Poecilia_formosa
ENSPCIG00000006076	-	80	89.394	ENSPLAG00000008416	srsf1b	79	89.691	Poecilia_latipinna
ENSPCIG00000006076	-	80	89.394	ENSPMEG00000002388	-	79	89.691	Poecilia_mexicana
ENSPCIG00000006076	-	50	89.516	ENSPMEG00000020607	-	98	87.097	Poecilia_mexicana
ENSPCIG00000006076	-	50	89.516	ENSPMEG00000014312	-	98	87.097	Poecilia_mexicana
ENSPCIG00000006076	-	78	92.268	ENSPREG00000009667	srsf1a	78	90.206	Poecilia_reticulata
ENSPCIG00000006076	-	100	99.197	ENSPPYG00000008240	SRSF1	100	99.197	Pongo_abelii
ENSPCIG00000006076	-	100	99.197	ENSPCAG00000005199	SRSF1	100	99.197	Procavia_capensis
ENSPCIG00000006076	-	100	99.197	ENSPCOG00000023654	-	100	99.197	Propithecus_coquereli
ENSPCIG00000006076	-	80	79.703	ENSPCOG00000025736	-	95	79.899	Propithecus_coquereli
ENSPCIG00000006076	-	75	100.000	ENSPVAG00000000519	-	75	100.000	Pteropus_vampyrus
ENSPCIG00000006076	-	94	93.191	ENSPNAG00000022241	srsf1a	78	90.256	Pygocentrus_nattereri
ENSPCIG00000006076	-	100	94.378	ENSPNAG00000014601	srsf1b	100	94.378	Pygocentrus_nattereri
ENSPCIG00000006076	-	100	99.197	ENSRNOG00000050323	Srsf1	100	99.197	Rattus_norvegicus
ENSPCIG00000006076	-	99	99.190	ENSRBIG00000034445	-	99	98.611	Rhinopithecus_bieti
ENSPCIG00000006076	-	100	99.197	ENSRROG00000041506	-	100	99.197	Rhinopithecus_roxellana
ENSPCIG00000006076	-	100	99.197	ENSSBOG00000025377	-	100	99.197	Saimiri_boliviensis_boliviensis
ENSPCIG00000006076	-	100	100.000	ENSSHAG00000002552	-	100	100.000	Sarcophilus_harrisii
ENSPCIG00000006076	-	99	96.371	ENSSFOG00015004800	srsf1a	99	96.371	Scleropages_formosus
ENSPCIG00000006076	-	94	87.917	ENSSMAG00000009719	-	80	86.765	Scophthalmus_maximus
ENSPCIG00000006076	-	78	90.722	ENSSMAG00000007018	-	78	88.144	Scophthalmus_maximus
ENSPCIG00000006076	-	78	91.237	ENSSDUG00000011303	-	83	89.175	Seriola_dumerili
ENSPCIG00000006076	-	100	77.291	ENSSDUG00000003929	-	84	83.000	Seriola_dumerili
ENSPCIG00000006076	-	95	76.371	ENSSLDG00000016895	-	78	84.574	Seriola_lalandi_dorsalis
ENSPCIG00000006076	-	78	91.237	ENSSLDG00000010543	-	78	89.175	Seriola_lalandi_dorsalis
ENSPCIG00000006076	-	80	78.392	ENSSLDG00000016868	-	78	82.915	Seriola_lalandi_dorsalis
ENSPCIG00000006076	-	74	98.919	ENSSARG00000010949	-	63	98.919	Sorex_araneus
ENSPCIG00000006076	-	99	98.785	ENSSPUG00000000804	-	97	98.785	Sphenodon_punctatus
ENSPCIG00000006076	-	80	88.038	ENSSPAG00000014152	-	81	87.081	Stegastes_partitus
ENSPCIG00000006076	-	78	92.784	ENSSPAG00000022562	-	78	90.722	Stegastes_partitus
ENSPCIG00000006076	-	100	99.197	ENSSSCG00000017626	-	100	99.197	Sus_scrofa
ENSPCIG00000006076	-	74	98.378	ENSTGUG00000008416	-	100	98.378	Taeniopygia_guttata
ENSPCIG00000006076	-	78	91.237	ENSTRUG00000003691	srsf1a	78	89.175	Takifugu_rubripes
ENSPCIG00000006076	-	78	91.237	ENSTNIG00000016223	srsf1a	77	89.175	Tetraodon_nigroviridis
ENSPCIG00000006076	-	74	97.297	ENSTBEG00000015378	-	63	97.297	Tupaia_belangeri
ENSPCIG00000006076	-	74	98.913	ENSTTRG00000007310	SRSF1	100	98.913	Tursiops_truncatus
ENSPCIG00000006076	-	100	99.197	ENSUAMG00000009858	SRSF1	100	99.197	Ursus_americanus
ENSPCIG00000006076	-	99	99.190	ENSUMAG00000000455	-	97	99.190	Ursus_maritimus
ENSPCIG00000006076	-	100	98.795	ENSVPAG00000010094	SRSF1	100	98.795	Vicugna_pacos
ENSPCIG00000006076	-	99	99.190	ENSVVUG00000011882	-	97	99.190	Vulpes_vulpes
ENSPCIG00000006076	-	100	95.984	ENSXETG00000008954	srsf1	100	92.135	Xenopus_tropicalis
ENSPCIG00000006076	-	78	92.268	ENSXMAG00000011766	srsf1a	78	90.206	Xiphophorus_maculatus