EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000006656 (Gene tree)
Gene ID: -
Gene Symbol: UPF2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 189564 bases
Position: chrFUWB01000243.1:2781089-2970652
Accession: 17854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000007987	Upf2	PF04050.14	1.4e-32	1	1
ENSPCIP00000007991	Upf2	PF04050.14	1.4e-32	1	1
ENSPCIP00000007987	MIF4G	PF02854.19	1.1e-73	1	3
ENSPCIP00000007987	MIF4G	PF02854.19	1.1e-73	2	3
ENSPCIP00000007987	MIF4G	PF02854.19	1.1e-73	3	3
ENSPCIP00000007991	MIF4G	PF02854.19	1.2e-73	1	3
ENSPCIP00000007991	MIF4G	PF02854.19	1.2e-73	2	3
ENSPCIP00000007991	MIF4G	PF02854.19	1.2e-73	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000010069	UPF2-201	4166	-	ENSPCIP00000007987	1269 (aa)	-	-
ENSPCIT00000010074	UPF2-202	3834	-	ENSPCIP00000007991	1271 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000006656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000006656's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000006656	UPF2	100	95.047	ENSG00000151461	UPF2	100	93.003	Homo_sapiens
ENSPCIG00000006656	UPF2	100	78.750	ENSAPOG00000015837	UPF2	81	80.728	Acanthochromis_polyacanthus
ENSPCIG00000006656	UPF2	100	96.139	ENSAMEG00000004586	UPF2	100	96.066	Ailuropoda_melanoleuca
ENSPCIG00000006656	UPF2	100	83.047	ENSACIG00000018078	UPF2	100	83.125	Amphilophus_citrinellus
ENSPCIG00000006656	UPF2	100	82.879	ENSAOCG00000016766	UPF2	100	82.995	Amphiprion_ocellaris
ENSPCIG00000006656	UPF2	100	82.957	ENSAPEG00000019084	UPF2	100	83.073	Amphiprion_percula
ENSPCIG00000006656	UPF2	100	82.659	ENSATEG00000021677	UPF2	99	82.737	Anabas_testudineus
ENSPCIG00000006656	UPF2	100	87.539	ENSAPLG00000010287	UPF2	90	92.167	Anas_platyrhynchos
ENSPCIG00000006656	UPF2	100	93.234	ENSACAG00000009259	UPF2	100	93.234	Anolis_carolinensis
ENSPCIG00000006656	UPF2	100	85.770	ENSANAG00000028451	UPF2	99	84.579	Aotus_nancymaae
ENSPCIG00000006656	UPF2	100	81.513	ENSACLG00000012696	UPF2	100	83.385	Astatotilapia_calliptera
ENSPCIG00000006656	UPF2	100	82.864	ENSAMXG00000013700	UPF2	99	82.629	Astyanax_mexicanus
ENSPCIG00000006656	UPF2	100	95.909	ENSBTAG00000000288	UPF2	100	95.909	Bos_taurus
ENSPCIG00000006656	UPF2	100	94.571	ENSCJAG00000020685	UPF2	100	94.571	Callithrix_jacchus
ENSPCIG00000006656	UPF2	100	96.145	ENSCAFG00000004839	UPF2	100	96.145	Canis_familiaris
ENSPCIG00000006656	UPF2	100	93.775	ENSCAFG00020005882	UPF2	98	95.648	Canis_lupus_dingo
ENSPCIG00000006656	UPF2	100	95.987	ENSCHIG00000020359	UPF2	100	95.987	Capra_hircus
ENSPCIG00000006656	UPF2	100	94.807	ENSTSYG00000000935	UPF2	100	94.807	Carlito_syrichta
ENSPCIG00000006656	UPF2	91	85.948	ENSCAPG00000016658	UPF2	94	85.516	Cavia_aperea
ENSPCIG00000006656	UPF2	99	93.418	ENSCPOG00000008809	UPF2	99	93.180	Cavia_porcellus
ENSPCIG00000006656	UPF2	100	87.569	ENSCCAG00000035991	UPF2	100	87.569	Cebus_capucinus
ENSPCIG00000006656	UPF2	100	95.283	ENSCATG00000032679	UPF2	100	93.239	Cercocebus_atys
ENSPCIG00000006656	UPF2	100	94.729	ENSCLAG00000011434	UPF2	100	94.493	Chinchilla_lanigera
ENSPCIG00000006656	UPF2	100	95.283	ENSCSAG00000013372	UPF2	100	93.239	Chlorocebus_sabaeus
ENSPCIG00000006656	UPF2	87	96.875	ENSCHOG00000000422	UPF2	89	96.875	Choloepus_hoffmanni
ENSPCIG00000006656	UPF2	100	93.617	ENSCPBG00000027823	UPF2	92	96.101	Chrysemys_picta_bellii
ENSPCIG00000006656	UPF2	79	49.213	ENSCSAVG00000007772	-	79	50.701	Ciona_savignyi
ENSPCIG00000006656	UPF2	100	88.984	ENSCANG00000040396	UPF2	100	87.569	Colobus_angolensis_palliatus
ENSPCIG00000006656	UPF2	100	95.594	ENSCGRG00001019347	Upf2	100	95.594	Cricetulus_griseus_chok1gshd
ENSPCIG00000006656	UPF2	100	95.594	ENSCGRG00000017993	Upf2	100	95.594	Cricetulus_griseus_crigri
ENSPCIG00000006656	UPF2	91	80.617	ENSCSEG00000003520	UPF2	71	84.246	Cynoglossus_semilaevis
ENSPCIG00000006656	UPF2	99	82.915	ENSCVAG00000006167	UPF2	100	82.524	Cyprinodon_variegatus
ENSPCIG00000006656	UPF2	100	95.830	ENSDNOG00000018160	UPF2	100	95.830	Dasypus_novemcinctus
ENSPCIG00000006656	UPF2	100	94.493	ENSDORG00000002478	Upf2	100	94.020	Dipodomys_ordii
ENSPCIG00000006656	UPF2	90	36.020	FBgn0029992	Upf2	90	39.325	Drosophila_melanogaster
ENSPCIG00000006656	UPF2	72	98.529	ENSETEG00000011583	-	66	98.529	Echinops_telfairi
ENSPCIG00000006656	UPF2	69	68.657	ENSEBUG00000012448	-	87	74.000	Eptatretus_burgeri
ENSPCIG00000006656	UPF2	100	93.942	ENSEASG00005019274	UPF2	100	96.605	Equus_asinus_asinus
ENSPCIG00000006656	UPF2	100	95.358	ENSECAG00000017022	UPF2	100	95.122	Equus_caballus
ENSPCIG00000006656	UPF2	82	93.291	ENSEEUG00000007819	UPF2	82	93.291	Erinaceus_europaeus
ENSPCIG00000006656	UPF2	100	81.634	ENSELUG00000012014	UPF2	100	82.271	Esox_lucius
ENSPCIG00000006656	UPF2	100	96.133	ENSFCAG00000005785	UPF2	100	95.909	Felis_catus
ENSPCIG00000006656	UPF2	100	94.178	ENSFALG00000001889	UPF2	98	94.178	Ficedula_albicollis
ENSPCIG00000006656	UPF2	100	94.414	ENSFDAG00000014348	UPF2	100	93.706	Fukomys_damarensis
ENSPCIG00000006656	UPF2	99	83.570	ENSFHEG00000009826	UPF2	99	83.175	Fundulus_heteroclitus
ENSPCIG00000006656	UPF2	91	83.910	ENSGMOG00000005557	UPF2	90	83.651	Gadus_morhua
ENSPCIG00000006656	UPF2	100	94.497	ENSGALG00000033772	UPF2	100	94.497	Gallus_gallus
ENSPCIG00000006656	UPF2	100	80.156	ENSGAFG00000020867	UPF2	100	81.868	Gambusia_affinis
ENSPCIG00000006656	UPF2	91	84.138	ENSGACG00000001080	UPF2	100	81.995	Gasterosteus_aculeatus
ENSPCIG00000006656	UPF2	100	93.863	ENSGAGG00000002700	UPF2	100	93.863	Gopherus_agassizii
ENSPCIG00000006656	UPF2	100	95.047	ENSGGOG00000001479	UPF2	100	93.003	Gorilla_gorilla
ENSPCIG00000006656	UPF2	100	81.484	ENSHBUG00000004249	UPF2	100	83.359	Haplochromis_burtoni
ENSPCIG00000006656	UPF2	100	83.373	ENSHGLG00000003822	-	99	82.598	Heterocephalus_glaber_female
ENSPCIG00000006656	UPF2	100	94.650	ENSHGLG00000015176	-	100	94.414	Heterocephalus_glaber_female
ENSPCIG00000006656	UPF2	88	96.137	ENSHGLG00100010036	UPF2	94	92.044	Heterocephalus_glaber_male
ENSPCIG00000006656	UPF2	100	80.264	ENSHCOG00000004025	UPF2	99	80.497	Hippocampus_comes
ENSPCIG00000006656	UPF2	100	81.747	ENSIPUG00000015524	UPF2	100	81.591	Ictalurus_punctatus
ENSPCIG00000006656	UPF2	100	94.886	ENSSTOG00000013075	UPF2	100	94.414	Ictidomys_tridecemlineatus
ENSPCIG00000006656	UPF2	100	93.784	ENSJJAG00000004913	Upf2	100	92.998	Jaculus_jaculus
ENSPCIG00000006656	UPF2	99	82.224	ENSKMAG00000001071	UPF2	100	81.989	Kryptolebias_marmoratus
ENSPCIG00000006656	UPF2	71	85.604	ENSLBEG00000000728	-	93	82.399	Labrus_bergylta
ENSPCIG00000006656	UPF2	91	85.410	ENSLBEG00000016394	-	99	82.788	Labrus_bergylta
ENSPCIG00000006656	UPF2	99	80.408	ENSLACG00000015945	UPF2	100	80.329	Latimeria_chalumnae
ENSPCIG00000006656	UPF2	99	86.840	ENSLOCG00000015698	UPF2	100	86.761	Lepisosteus_oculatus
ENSPCIG00000006656	UPF2	100	95.204	ENSMFAG00000043865	UPF2	100	93.160	Macaca_fascicularis
ENSPCIG00000006656	UPF2	100	95.204	ENSMMUG00000008241	UPF2	100	93.160	Macaca_mulatta
ENSPCIG00000006656	UPF2	81	94.439	ENSMNEG00000008062	UPF2	99	92.165	Macaca_nemestrina
ENSPCIG00000006656	UPF2	95	97.108	ENSMLEG00000036120	UPF2	100	97.343	Mandrillus_leucophaeus
ENSPCIG00000006656	UPF2	100	82.724	ENSMAMG00000018276	UPF2	100	82.724	Mastacembelus_armatus
ENSPCIG00000006656	UPF2	100	81.513	ENSMZEG00005021595	UPF2	100	83.385	Maylandia_zebra
ENSPCIG00000006656	UPF2	99	93.691	ENSMGAG00000004573	UPF2	99	93.691	Meleagris_gallopavo
ENSPCIG00000006656	UPF2	100	93.470	ENSMAUG00000016512	Upf2	100	93.470	Mesocricetus_auratus
ENSPCIG00000006656	UPF2	95	96.429	ENSMICG00000001716	UPF2	99	96.410	Microcebus_murinus
ENSPCIG00000006656	UPF2	100	94.807	ENSMOCG00000008263	Upf2	100	94.807	Microtus_ochrogaster
ENSPCIG00000006656	UPF2	90	82.205	ENSMMOG00000006528	UPF2	91	81.850	Mola_mola
ENSPCIG00000006656	UPF2	100	98.741	ENSMODG00000016794	UPF2	100	98.741	Monodelphis_domestica
ENSPCIG00000006656	UPF2	100	82.799	ENSMALG00000002663	UPF2	100	82.799	Monopterus_albus
ENSPCIG00000006656	UPF2	100	94.729	MGP_CAROLIEiJ_G0023157	Upf2	100	96.381	Mus_caroli
ENSPCIG00000006656	UPF2	100	95.122	ENSMUSG00000043241	Upf2	100	95.122	Mus_musculus
ENSPCIG00000006656	UPF2	100	94.493	MGP_PahariEiJ_G0019217	Upf2	100	94.095	Mus_pahari
ENSPCIG00000006656	UPF2	100	95.358	MGP_SPRETEiJ_G0024075	Upf2	100	95.358	Mus_spretus
ENSPCIG00000006656	UPF2	100	96.066	ENSMPUG00000001064	UPF2	100	96.066	Mustela_putorius_furo
ENSPCIG00000006656	UPF2	100	95.130	ENSMLUG00000000228	UPF2	100	95.051	Myotis_lucifugus
ENSPCIG00000006656	UPF2	100	81.513	ENSNBRG00000013629	UPF2	100	83.385	Neolamprologus_brichardi
ENSPCIG00000006656	UPF2	100	95.047	ENSNLEG00000012058	UPF2	100	93.003	Nomascus_leucogenys
ENSPCIG00000006656	UPF2	61	100.000	ENSMEUG00000002180	-	59	100.000	Notamacropus_eugenii
ENSPCIG00000006656	UPF2	77	98.592	ENSOPRG00000006801	-	77	98.592	Ochotona_princeps
ENSPCIG00000006656	UPF2	100	94.650	ENSODEG00000001290	UPF2	100	94.414	Octodon_degus
ENSPCIG00000006656	UPF2	100	81.591	ENSONIG00000017991	UPF2	100	83.463	Oreochromis_niloticus
ENSPCIG00000006656	UPF2	100	93.966	ENSOCUG00000006230	UPF2	100	94.563	Oryctolagus_cuniculus
ENSPCIG00000006656	UPF2	100	81.712	ENSORLG00000017189	UPF2	100	81.946	Oryzias_latipes
ENSPCIG00000006656	UPF2	100	81.712	ENSORLG00020005969	UPF2	100	81.946	Oryzias_latipes_hni
ENSPCIG00000006656	UPF2	100	81.712	ENSORLG00015005713	UPF2	100	81.946	Oryzias_latipes_hsok
ENSPCIG00000006656	UPF2	100	78.939	ENSOMEG00000023420	UPF2	98	79.173	Oryzias_melastigma
ENSPCIG00000006656	UPF2	100	95.358	ENSOGAG00000005796	UPF2	100	95.358	Otolemur_garnettii
ENSPCIG00000006656	UPF2	100	95.837	ENSOARG00000014587	UPF2	100	95.837	Ovis_aries
ENSPCIG00000006656	UPF2	100	91.321	ENSPPAG00000037953	UPF2	100	90.000	Pan_paniscus
ENSPCIG00000006656	UPF2	100	95.909	ENSPPRG00000000690	UPF2	100	95.909	Panthera_pardus
ENSPCIG00000006656	UPF2	100	95.909	ENSPTIG00000008867	UPF2	100	95.909	Panthera_tigris_altaica
ENSPCIG00000006656	UPF2	100	95.047	ENSPTRG00000002291	UPF2	100	93.003	Pan_troglodytes
ENSPCIG00000006656	UPF2	100	95.283	ENSPANG00000023399	UPF2	100	93.239	Papio_anubis
ENSPCIG00000006656	UPF2	100	81.045	ENSPKIG00000025502	UPF2	100	81.669	Paramormyrops_kingsleyae
ENSPCIG00000006656	UPF2	59	93.094	ENSPSIG00000015158	UPF2	95	93.094	Pelodiscus_sinensis
ENSPCIG00000006656	UPF2	100	80.911	ENSPMGG00000005259	UPF2	100	81.725	Periophthalmus_magnuspinnatus
ENSPCIG00000006656	UPF2	93	92.711	ENSPEMG00000015731	Upf2	99	92.711	Peromyscus_maniculatus_bairdii
ENSPCIG00000006656	UPF2	100	80.187	ENSPFOG00000017118	UPF2	100	82.137	Poecilia_formosa
ENSPCIG00000006656	UPF2	100	80.156	ENSPLAG00000005094	UPF2	100	82.101	Poecilia_latipinna
ENSPCIG00000006656	UPF2	100	80.156	ENSPMEG00000017009	UPF2	100	82.101	Poecilia_mexicana
ENSPCIG00000006656	UPF2	100	80.234	ENSPREG00000021880	UPF2	100	82.500	Poecilia_reticulata
ENSPCIG00000006656	UPF2	66	96.531	ENSPPYG00000002089	-	100	96.531	Pongo_abelii
ENSPCIG00000006656	UPF2	100	81.983	ENSPCAG00000000684	UPF2	90	86.501	Procavia_capensis
ENSPCIG00000006656	UPF2	100	92.041	ENSPCOG00000021656	UPF2	100	91.805	Propithecus_coquereli
ENSPCIG00000006656	UPF2	100	88.129	ENSPVAG00000017286	UPF2	100	88.129	Pteropus_vampyrus
ENSPCIG00000006656	UPF2	100	78.984	ENSPNYG00000017096	UPF2	100	80.859	Pundamilia_nyererei
ENSPCIG00000006656	UPF2	100	83.307	ENSPNAG00000009357	UPF2	100	83.229	Pygocentrus_nattereri
ENSPCIG00000006656	UPF2	100	89.560	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSPCIG00000006656	UPF2	100	93.853	ENSRBIG00000037780	UPF2	100	93.302	Rhinopithecus_bieti
ENSPCIG00000006656	UPF2	100	94.733	ENSRROG00000043547	UPF2	100	92.217	Rhinopithecus_roxellana
ENSPCIG00000006656	UPF2	100	94.020	ENSSBOG00000020012	UPF2	100	93.548	Saimiri_boliviensis_boliviensis
ENSPCIG00000006656	UPF2	100	81.995	ENSSFOG00015023788	upf2	100	83.087	Scleropages_formosus
ENSPCIG00000006656	UPF2	90	83.030	ENSSMAG00000007637	UPF2	90	83.577	Scophthalmus_maximus
ENSPCIG00000006656	UPF2	100	82.802	ENSSDUG00000017244	UPF2	99	82.917	Seriola_dumerili
ENSPCIG00000006656	UPF2	100	81.094	ENSSLDG00000016866	UPF2	82	84.169	Seriola_lalandi_dorsalis
ENSPCIG00000006656	UPF2	100	93.784	ENSSARG00000008615	UPF2	100	93.784	Sorex_araneus
ENSPCIG00000006656	UPF2	100	91.253	ENSSPUG00000014544	UPF2	99	91.260	Sphenodon_punctatus
ENSPCIG00000006656	UPF2	68	96.548	ENSSSCG00000011117	-	100	96.548	Sus_scrofa
ENSPCIG00000006656	UPF2	99	93.927	ENSTGUG00000002163	-	100	93.927	Taeniopygia_guttata
ENSPCIG00000006656	UPF2	100	82.023	ENSTRUG00000007519	UPF2	99	81.946	Takifugu_rubripes
ENSPCIG00000006656	UPF2	93	87.722	ENSTBEG00000012679	UPF2	93	87.214	Tupaia_belangeri
ENSPCIG00000006656	UPF2	100	95.437	ENSTTRG00000016388	UPF2	100	95.201	Tursiops_truncatus
ENSPCIG00000006656	UPF2	92	97.222	ENSUAMG00000023560	UPF2	98	100.000	Ursus_americanus
ENSPCIG00000006656	UPF2	100	96.145	ENSUMAG00000012953	UPF2	95	96.145	Ursus_maritimus
ENSPCIG00000006656	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSPCIG00000006656	UPF2	100	96.223	ENSVVUG00000006166	UPF2	100	96.223	Vulpes_vulpes
ENSPCIG00000006656	UPF2	100	84.718	ENSXETG00000033103	UPF2	91	89.187	Xenopus_tropicalis
ENSPCIG00000006656	UPF2	91	84.872	ENSXCOG00000011604	UPF2	100	81.761	Xiphophorus_couchianus
ENSPCIG00000006656	UPF2	91	85.154	ENSXMAG00000017209	UPF2	100	81.790	Xiphophorus_maculatus