EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000006870 (Gene tree)
Gene ID: 110217407
Gene Symbol: YTHDC1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 33909 bases
Position: chrFUWB01001225.1:71295-105203
Accession: 110217407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000008297	YTH	PF04146.15	3.1e-40	1	1
ENSPCIP00000008292	YTH	PF04146.15	3.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000010447	YTHDC1-201	2956	XM_020999798	ENSPCIP00000008292	701 (aa)	XP_020855457	UPI000A288043
ENSPCIT00000010452	YTHDC1-202	2902	XM_020999801	ENSPCIP00000008297	683 (aa)	XP_020855460	UPI000A28C573

Gene Model

Click here to download ENSPCIG00000006870's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000006870's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000006870	YTHDC1	92	88.707	ENSG00000083896	YTHDC1	93	89.599	Homo_sapiens
ENSPCIG00000006870	YTHDC1	59	60.241	ENSAPOG00000013997	ythdc1	93	53.566	Acanthochromis_polyacanthus
ENSPCIG00000006870	YTHDC1	92	88.609	ENSAMEG00000005688	YTHDC1	93	88.314	Ailuropoda_melanoleuca
ENSPCIG00000006870	YTHDC1	59	61.927	ENSAOCG00000000239	ythdc1	94	56.725	Amphiprion_ocellaris
ENSPCIG00000006870	YTHDC1	51	66.391	ENSAPEG00000000618	ythdc1	90	56.634	Amphiprion_percula
ENSPCIG00000006870	YTHDC1	91	89.009	ENSAPLG00000009921	YTHDC1	92	87.771	Anas_platyrhynchos
ENSPCIG00000006870	YTHDC1	92	84.848	ENSACAG00000009697	YTHDC1	93	85.888	Anolis_carolinensis
ENSPCIG00000006870	YTHDC1	92	88.576	ENSANAG00000001522	YTHDC1	93	89.466	Aotus_nancymaae
ENSPCIG00000006870	YTHDC1	92	52.774	ENSACLG00000019371	ythdc1	94	56.681	Astatotilapia_calliptera
ENSPCIG00000006870	YTHDC1	92	67.643	ENSAMXG00000006978	ythdc1	92	68.105	Astyanax_mexicanus
ENSPCIG00000006870	YTHDC1	92	87.685	ENSBTAG00000015572	YTHDC1	93	87.834	Bos_taurus
ENSPCIG00000006870	YTHDC1	92	88.427	ENSCJAG00000009934	YTHDC1	93	89.466	Callithrix_jacchus
ENSPCIG00000006870	YTHDC1	92	88.609	ENSCAFG00000002821	YTHDC1	93	88.314	Canis_familiaris
ENSPCIG00000006870	YTHDC1	92	88.609	ENSCAFG00020027112	YTHDC1	93	88.314	Canis_lupus_dingo
ENSPCIG00000006870	YTHDC1	91	81.679	ENSCHIG00000004810	YTHDC1	95	87.041	Capra_hircus
ENSPCIG00000006870	YTHDC1	92	88.707	ENSTSYG00000011668	YTHDC1	93	89.747	Carlito_syrichta
ENSPCIG00000006870	YTHDC1	90	61.502	ENSCAPG00000008722	YTHDC1	90	60.542	Cavia_aperea
ENSPCIG00000006870	YTHDC1	92	81.278	ENSCPOG00000010929	YTHDC1	92	81.129	Cavia_porcellus
ENSPCIG00000006870	YTHDC1	92	88.690	ENSCCAG00000035754	YTHDC1	93	89.435	Cebus_capucinus
ENSPCIG00000006870	YTHDC1	92	88.110	ENSCATG00000036320	YTHDC1	97	87.500	Cercocebus_atys
ENSPCIG00000006870	YTHDC1	91	88.509	ENSCLAG00000005482	YTHDC1	92	88.820	Chinchilla_lanigera
ENSPCIG00000006870	YTHDC1	92	88.427	ENSCSAG00000005252	YTHDC1	93	89.466	Chlorocebus_sabaeus
ENSPCIG00000006870	YTHDC1	92	89.110	ENSCPBG00000021965	YTHDC1	94	88.553	Chrysemys_picta_bellii
ENSPCIG00000006870	YTHDC1	92	88.576	ENSCANG00000004769	YTHDC1	96	87.308	Colobus_angolensis_palliatus
ENSPCIG00000006870	YTHDC1	92	87.634	ENSCGRG00001000816	Ythdc1	93	88.397	Cricetulus_griseus_chok1gshd
ENSPCIG00000006870	YTHDC1	91	87.801	ENSCGRG00000009807	Ythdc1	92	88.554	Cricetulus_griseus_crigri
ENSPCIG00000006870	YTHDC1	92	53.767	ENSCSEG00000020404	ythdc1	94	56.364	Cynoglossus_semilaevis
ENSPCIG00000006870	YTHDC1	59	59.867	ENSCVAG00000022349	ythdc1	94	55.735	Cyprinodon_variegatus
ENSPCIG00000006870	YTHDC1	92	65.379	ENSDARG00000051953	ythdc1	92	64.394	Danio_rerio
ENSPCIG00000006870	YTHDC1	92	90.120	ENSDNOG00000004949	YTHDC1	93	89.970	Dasypus_novemcinctus
ENSPCIG00000006870	YTHDC1	91	87.952	ENSDORG00000013045	Ythdc1	92	88.102	Dipodomys_ordii
ENSPCIG00000006870	YTHDC1	80	100.000	ENSETEG00000001878	YTHDC1	75	100.000	Echinops_telfairi
ENSPCIG00000006870	YTHDC1	92	88.905	ENSEASG00005018383	YTHDC1	93	88.609	Equus_asinus_asinus
ENSPCIG00000006870	YTHDC1	92	88.609	ENSECAG00000018303	YTHDC1	99	85.847	Equus_caballus
ENSPCIG00000006870	YTHDC1	92	87.685	ENSEEUG00000015466	YTHDC1	93	87.092	Erinaceus_europaeus
ENSPCIG00000006870	YTHDC1	92	64.540	ENSELUG00000014029	ythdc1	95	65.008	Esox_lucius
ENSPCIG00000006870	YTHDC1	92	88.444	ENSFCAG00000026791	YTHDC1	93	89.185	Felis_catus
ENSPCIG00000006870	YTHDC1	73	87.196	ENSFALG00000006581	YTHDC1	87	97.704	Ficedula_albicollis
ENSPCIG00000006870	YTHDC1	91	88.200	ENSFDAG00000018560	YTHDC1	92	89.410	Fukomys_damarensis
ENSPCIG00000006870	YTHDC1	68	57.143	ENSFHEG00000001286	ythdc1	61	55.357	Fundulus_heteroclitus
ENSPCIG00000006870	YTHDC1	57	77.833	ENSGMOG00000018815	ythdc1	70	77.833	Gadus_morhua
ENSPCIG00000006870	YTHDC1	92	88.497	ENSGALG00000035906	YTHDC1	88	85.207	Gallus_gallus
ENSPCIG00000006870	YTHDC1	92	88.383	ENSGAGG00000007108	YTHDC1	93	86.576	Gopherus_agassizii
ENSPCIG00000006870	YTHDC1	92	88.262	ENSGGOG00000021958	YTHDC1	97	87.476	Gorilla_gorilla
ENSPCIG00000006870	YTHDC1	92	52.616	ENSHBUG00000019288	ythdc1	93	56.871	Haplochromis_burtoni
ENSPCIG00000006870	YTHDC1	94	72.686	ENSHGLG00000003239	-	86	72.586	Heterocephalus_glaber_female
ENSPCIG00000006870	YTHDC1	92	88.326	ENSHGLG00000006319	-	93	88.922	Heterocephalus_glaber_female
ENSPCIG00000006870	YTHDC1	92	87.667	ENSHGLG00100001556	-	93	89.004	Heterocephalus_glaber_male
ENSPCIG00000006870	YTHDC1	94	71.148	ENSHGLG00100008060	-	86	71.163	Heterocephalus_glaber_male
ENSPCIG00000006870	YTHDC1	71	72.340	ENSHCOG00000001520	ythdc1	84	72.340	Hippocampus_comes
ENSPCIG00000006870	YTHDC1	92	68.373	ENSIPUG00000018136	ythdc1	92	68.976	Ictalurus_punctatus
ENSPCIG00000006870	YTHDC1	92	87.243	ENSSTOG00000013652	YTHDC1	93	87.390	Ictidomys_tridecemlineatus
ENSPCIG00000006870	YTHDC1	91	86.385	ENSJJAG00000010268	Ythdc1	93	87.087	Jaculus_jaculus
ENSPCIG00000006870	YTHDC1	59	60.633	ENSKMAG00000006483	ythdc1	85	65.525	Kryptolebias_marmoratus
ENSPCIG00000006870	YTHDC1	66	63.725	ENSLBEG00000020831	ythdc1	72	77.273	Labrus_bergylta
ENSPCIG00000006870	YTHDC1	86	75.197	ENSLACG00000004893	YTHDC1	92	73.776	Latimeria_chalumnae
ENSPCIG00000006870	YTHDC1	92	72.321	ENSLOCG00000003045	ythdc1	92	70.928	Lepisosteus_oculatus
ENSPCIG00000006870	YTHDC1	92	88.757	ENSLAFG00000021592	YTHDC1	99	85.026	Loxodonta_africana
ENSPCIG00000006870	YTHDC1	92	88.262	ENSMFAG00000031927	YTHDC1	96	87.308	Macaca_fascicularis
ENSPCIG00000006870	YTHDC1	92	88.576	ENSMMUG00000002265	YTHDC1	93	89.614	Macaca_mulatta
ENSPCIG00000006870	YTHDC1	92	88.576	ENSMNEG00000033751	YTHDC1	96	87.308	Macaca_nemestrina
ENSPCIG00000006870	YTHDC1	92	88.427	ENSMLEG00000042147	YTHDC1	96	87.308	Mandrillus_leucophaeus
ENSPCIG00000006870	YTHDC1	58	62.350	ENSMAMG00000013122	ythdc1	92	55.959	Mastacembelus_armatus
ENSPCIG00000006870	YTHDC1	92	52.774	ENSMZEG00005023173	ythdc1	93	56.681	Maylandia_zebra
ENSPCIG00000006870	YTHDC1	92	88.720	ENSMGAG00000010391	YTHDC1	92	87.652	Meleagris_gallopavo
ENSPCIG00000006870	YTHDC1	92	87.634	ENSMAUG00000001286	Ythdc1	93	88.550	Mesocricetus_auratus
ENSPCIG00000006870	YTHDC1	92	89.249	ENSMICG00000034640	YTHDC1	93	88.513	Microcebus_murinus
ENSPCIG00000006870	YTHDC1	92	87.883	ENSMOCG00000020201	Ythdc1	93	88.201	Microtus_ochrogaster
ENSPCIG00000006870	YTHDC1	89	69.932	ENSMODG00000014337	-	95	71.212	Monodelphis_domestica
ENSPCIG00000006870	YTHDC1	50	60.588	ENSMODG00000004117	-	92	62.939	Monodelphis_domestica
ENSPCIG00000006870	YTHDC1	100	99.572	ENSMODG00000020754	-	100	99.572	Monodelphis_domestica
ENSPCIG00000006870	YTHDC1	96	53.228	ENSMODG00000010076	-	96	52.695	Monodelphis_domestica
ENSPCIG00000006870	YTHDC1	66	58.405	ENSMODG00000009173	-	87	62.500	Monodelphis_domestica
ENSPCIG00000006870	YTHDC1	51	68.927	ENSMALG00000013412	ythdc1	94	57.407	Monopterus_albus
ENSPCIG00000006870	YTHDC1	92	88.427	MGP_CAROLIEiJ_G0027347	Ythdc1	93	87.964	Mus_caroli
ENSPCIG00000006870	YTHDC1	92	88.148	ENSMUSG00000035851	Ythdc1	93	87.537	Mus_musculus
ENSPCIG00000006870	YTHDC1	92	88.148	MGP_PahariEiJ_G0017126	Ythdc1	93	87.537	Mus_pahari
ENSPCIG00000006870	YTHDC1	92	88.444	MGP_SPRETEiJ_G0028339	Ythdc1	93	87.834	Mus_spretus
ENSPCIG00000006870	YTHDC1	92	72.100	ENSMPUG00000001743	YTHDC1	53	98.956	Mustela_putorius_furo
ENSPCIG00000006870	YTHDC1	91	88.788	ENSMLUG00000016300	YTHDC1	92	89.545	Myotis_lucifugus
ENSPCIG00000006870	YTHDC1	58	82.143	ENSNGAG00000024000	Ythdc1	93	82.423	Nannospalax_galili
ENSPCIG00000006870	YTHDC1	59	60.890	ENSNBRG00000007663	ythdc1	70	66.355	Neolamprologus_brichardi
ENSPCIG00000006870	YTHDC1	91	87.054	ENSNLEG00000009202	YTHDC1	96	86.513	Nomascus_leucogenys
ENSPCIG00000006870	YTHDC1	82	82.943	ENSMEUG00000007128	YTHDC1	68	98.851	Notamacropus_eugenii
ENSPCIG00000006870	YTHDC1	77	98.017	ENSOPRG00000008986	YTHDC1	74	98.017	Ochotona_princeps
ENSPCIG00000006870	YTHDC1	92	88.939	ENSODEG00000001715	YTHDC1	93	90.284	Octodon_degus
ENSPCIG00000006870	YTHDC1	92	53.223	ENSONIG00000012651	ythdc1	91	70.000	Oreochromis_niloticus
ENSPCIG00000006870	YTHDC1	88	75.229	ENSOANG00000014398	YTHDC1	55	95.696	Ornithorhynchus_anatinus
ENSPCIG00000006870	YTHDC1	93	79.254	ENSOCUG00000015886	YTHDC1	56	96.212	Oryctolagus_cuniculus
ENSPCIG00000006870	YTHDC1	92	51.971	ENSORLG00000030544	ythdc1	94	56.909	Oryzias_latipes
ENSPCIG00000006870	YTHDC1	92	51.351	ENSORLG00020019316	ythdc1	94	57.122	Oryzias_latipes_hni
ENSPCIG00000006870	YTHDC1	92	53.823	ENSOMEG00000000551	ythdc1	94	56.569	Oryzias_melastigma
ENSPCIG00000006870	YTHDC1	92	87.816	ENSOGAG00000003362	YTHDC1	93	88.707	Otolemur_garnettii
ENSPCIG00000006870	YTHDC1	92	87.685	ENSOARG00000008633	YTHDC1	93	87.834	Ovis_aries
ENSPCIG00000006870	YTHDC1	92	88.244	ENSPPAG00000041315	YTHDC1	97	87.838	Pan_paniscus
ENSPCIG00000006870	YTHDC1	92	88.280	ENSPPRG00000011979	YTHDC1	93	87.848	Panthera_pardus
ENSPCIG00000006870	YTHDC1	91	87.790	ENSPTIG00000015527	YTHDC1	93	87.370	Panthera_tigris_altaica
ENSPCIG00000006870	YTHDC1	92	88.244	ENSPTRG00000016105	YTHDC1	97	87.838	Pan_troglodytes
ENSPCIG00000006870	YTHDC1	92	88.110	ENSPANG00000021590	YTHDC1	97	86.578	Papio_anubis
ENSPCIG00000006870	YTHDC1	92	70.615	ENSPKIG00000018497	ythdc1	93	71.214	Paramormyrops_kingsleyae
ENSPCIG00000006870	YTHDC1	91	89.474	ENSPSIG00000002782	YTHDC1	92	88.545	Pelodiscus_sinensis
ENSPCIG00000006870	YTHDC1	50	64.286	ENSPMGG00000000970	-	73	64.726	Periophthalmus_magnuspinnatus
ENSPCIG00000006870	YTHDC1	91	87.783	ENSPEMG00000013850	Ythdc1	92	88.537	Peromyscus_maniculatus_bairdii
ENSPCIG00000006870	YTHDC1	59	60.000	ENSPFOG00000013404	ythdc1	94	56.805	Poecilia_formosa
ENSPCIG00000006870	YTHDC1	59	60.000	ENSPLAG00000011079	ythdc1	85	65.385	Poecilia_latipinna
ENSPCIG00000006870	YTHDC1	59	60.000	ENSPMEG00000009238	ythdc1	94	56.805	Poecilia_mexicana
ENSPCIG00000006870	YTHDC1	59	60.192	ENSPREG00000016973	ythdc1	93	52.352	Poecilia_reticulata
ENSPCIG00000006870	YTHDC1	79	88.581	ENSPPYG00000014726	YTHDC1	91	89.619	Pongo_abelii
ENSPCIG00000006870	YTHDC1	76	89.545	ENSPCAG00000009607	YTHDC1	77	89.091	Procavia_capensis
ENSPCIG00000006870	YTHDC1	92	84.992	ENSPCOG00000019105	YTHDC1	92	84.227	Propithecus_coquereli
ENSPCIG00000006870	YTHDC1	92	80.650	ENSPVAG00000015551	YTHDC1	93	85.229	Pteropus_vampyrus
ENSPCIG00000006870	YTHDC1	92	52.774	ENSPNYG00000011687	ythdc1	94	56.681	Pundamilia_nyererei
ENSPCIG00000006870	YTHDC1	92	70.387	ENSPNAG00000028365	ythdc1	93	70.746	Pygocentrus_nattereri
ENSPCIG00000006870	YTHDC1	60	96.956	ENSRNOG00000001996	Ythdc1	93	86.696	Rattus_norvegicus
ENSPCIG00000006870	YTHDC1	91	86.033	ENSRBIG00000028279	YTHDC1	96	85.769	Rhinopithecus_bieti
ENSPCIG00000006870	YTHDC1	92	88.576	ENSRROG00000035028	YTHDC1	96	87.308	Rhinopithecus_roxellana
ENSPCIG00000006870	YTHDC1	92	88.110	ENSSBOG00000022353	YTHDC1	96	87.115	Saimiri_boliviensis_boliviensis
ENSPCIG00000006870	YTHDC1	100	98.146	ENSSHAG00000002538	YTHDC1	100	99.209	Sarcophilus_harrisii
ENSPCIG00000006870	YTHDC1	92	71.299	ENSSFOG00015003298	ythdc1	93	70.393	Scleropages_formosus
ENSPCIG00000006870	YTHDC1	59	60.762	ENSSMAG00000009086	ythdc1	94	56.535	Scophthalmus_maximus
ENSPCIG00000006870	YTHDC1	58	61.501	ENSSDUG00000022008	ythdc1	94	57.496	Seriola_dumerili
ENSPCIG00000006870	YTHDC1	58	61.501	ENSSLDG00000007926	ythdc1	94	57.496	Seriola_lalandi_dorsalis
ENSPCIG00000006870	YTHDC1	72	90.249	ENSSARG00000010960	YTHDC1	91	90.057	Sorex_araneus
ENSPCIG00000006870	YTHDC1	92	87.102	ENSSPUG00000009357	YTHDC1	94	85.243	Sphenodon_punctatus
ENSPCIG00000006870	YTHDC1	59	62.844	ENSSPAG00000011449	ythdc1	94	57.205	Stegastes_partitus
ENSPCIG00000006870	YTHDC1	85	85.984	ENSSSCG00000035505	YTHDC1	92	86.614	Sus_scrofa
ENSPCIG00000006870	YTHDC1	92	88.567	ENSTGUG00000004452	-	92	87.500	Taeniopygia_guttata
ENSPCIG00000006870	YTHDC1	67	58.199	ENSTRUG00000010142	ythdc1	71	62.590	Takifugu_rubripes
ENSPCIG00000006870	YTHDC1	92	52.006	ENSTNIG00000013243	ythdc1	91	53.997	Tetraodon_nigroviridis
ENSPCIG00000006870	YTHDC1	92	81.900	ENSTBEG00000011546	YTHDC1	92	83.861	Tupaia_belangeri
ENSPCIG00000006870	YTHDC1	92	85.799	ENSTTRG00000005083	YTHDC1	93	87.130	Tursiops_truncatus
ENSPCIG00000006870	YTHDC1	85	87.981	ENSUAMG00000010388	YTHDC1	92	88.301	Ursus_americanus
ENSPCIG00000006870	YTHDC1	99	83.694	ENSUMAG00000013668	YTHDC1	98	83.694	Ursus_maritimus
ENSPCIG00000006870	YTHDC1	92	88.668	ENSVPAG00000009040	YTHDC1	92	88.361	Vicugna_pacos
ENSPCIG00000006870	YTHDC1	91	87.407	ENSVVUG00000005387	YTHDC1	92	86.720	Vulpes_vulpes
ENSPCIG00000006870	YTHDC1	91	76.524	ENSXETG00000017960	ythdc1	91	74.771	Xenopus_tropicalis
ENSPCIG00000006870	YTHDC1	92	52.656	ENSXMAG00000005196	ythdc1	94	55.193	Xiphophorus_maculatus