EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000007684 (Gene tree)
Gene ID: 110217484
Gene Symbol: RTCA
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 26272 bases
Position: chrFUWB01000887.1:423499-449770
Accession: 110217484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000009386	RTC	PF01137.21	1e-88	1	1
ENSPCIP00000009386	RTC_insert	PF05189.13	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000011804	RTCA-201	1547	XM_020999883	ENSPCIP00000009386	366 (aa)	XP_020855542	UPI000A282AC8

Gene Model

Click here to download ENSPCIG00000007684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000007684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000007684	RTCA	100	90.437	ENSG00000137996	RTCA	100	93.878	Homo_sapiens
ENSPCIG00000007684	RTCA	99	70.914	ENSAPOG00000001345	rtca	98	70.914	Acanthochromis_polyacanthus
ENSPCIG00000007684	RTCA	73	89.963	ENSAMEG00000008855	RTCA	100	89.963	Ailuropoda_melanoleuca
ENSPCIG00000007684	RTCA	99	71.468	ENSACIG00000019643	rtca	99	71.468	Amphilophus_citrinellus
ENSPCIG00000007684	RTCA	100	70.492	ENSAOCG00000014979	rtca	99	70.492	Amphiprion_ocellaris
ENSPCIG00000007684	RTCA	100	70.492	ENSAPEG00000006945	rtca	99	70.492	Amphiprion_percula
ENSPCIG00000007684	RTCA	100	69.399	ENSATEG00000006315	rtca	100	69.399	Anabas_testudineus
ENSPCIG00000007684	RTCA	96	80.508	ENSAPLG00000015430	RTCA	100	80.508	Anas_platyrhynchos
ENSPCIG00000007684	RTCA	100	90.437	ENSANAG00000025446	RTCA	100	90.437	Aotus_nancymaae
ENSPCIG00000007684	RTCA	100	70.219	ENSACLG00000020770	rtca	99	70.219	Astatotilapia_calliptera
ENSPCIG00000007684	RTCA	100	72.404	ENSAMXG00000043271	rtca	100	72.404	Astyanax_mexicanus
ENSPCIG00000007684	RTCA	100	91.803	ENSBTAG00000006321	RTCA	100	91.803	Bos_taurus
ENSPCIG00000007684	RTCA	100	90.164	ENSCJAG00000003398	RTCA	100	90.164	Callithrix_jacchus
ENSPCIG00000007684	RTCA	100	91.803	ENSCAFG00000020010	RTCA	68	91.803	Canis_familiaris
ENSPCIG00000007684	RTCA	100	91.803	ENSCAFG00020011528	RTCA	57	91.803	Canis_lupus_dingo
ENSPCIG00000007684	RTCA	100	91.530	ENSCHIG00000018937	RTCA	100	91.530	Capra_hircus
ENSPCIG00000007684	RTCA	100	90.710	ENSTSYG00000011305	RTCA	100	90.710	Carlito_syrichta
ENSPCIG00000007684	RTCA	100	89.891	ENSCCAG00000021844	RTCA	99	90.991	Cebus_capucinus
ENSPCIG00000007684	RTCA	100	87.599	ENSCATG00000019364	RTCA	100	89.968	Cercocebus_atys
ENSPCIG00000007684	RTCA	87	88.959	ENSCLAG00000006125	RTCA	100	88.959	Chinchilla_lanigera
ENSPCIG00000007684	RTCA	100	90.710	ENSCSAG00000001509	RTCA	100	90.710	Chlorocebus_sabaeus
ENSPCIG00000007684	RTCA	99	91.736	ENSCHOG00000005211	RTCA	99	91.736	Choloepus_hoffmanni
ENSPCIG00000007684	RTCA	100	85.246	ENSCPBG00000026658	RTCA	100	85.246	Chrysemys_picta_bellii
ENSPCIG00000007684	RTCA	98	56.389	ENSCING00000007875	-	98	56.389	Ciona_intestinalis
ENSPCIG00000007684	RTCA	98	55.833	ENSCSAVG00000007269	-	98	55.833	Ciona_savignyi
ENSPCIG00000007684	RTCA	100	90.437	ENSCANG00000040106	RTCA	100	90.437	Colobus_angolensis_palliatus
ENSPCIG00000007684	RTCA	73	87.732	ENSCGRG00001013163	Rtca	85	87.732	Cricetulus_griseus_chok1gshd
ENSPCIG00000007684	RTCA	98	69.444	ENSCSEG00000000530	rtca	96	69.444	Cynoglossus_semilaevis
ENSPCIG00000007684	RTCA	100	59.290	ENSCVAG00000021809	rtca	100	59.290	Cyprinodon_variegatus
ENSPCIG00000007684	RTCA	100	72.131	ENSDARG00000002215	rtca	100	72.131	Danio_rerio
ENSPCIG00000007684	RTCA	99	91.460	ENSDNOG00000000456	RTCA	99	91.460	Dasypus_novemcinctus
ENSPCIG00000007684	RTCA	100	89.071	ENSDORG00000005448	Rtca	100	89.071	Dipodomys_ordii
ENSPCIG00000007684	RTCA	98	39.665	FBgn0025630	Rtca	98	39.665	Drosophila_melanogaster
ENSPCIG00000007684	RTCA	95	57.062	ENSEBUG00000008556	rtca	97	57.062	Eptatretus_burgeri
ENSPCIG00000007684	RTCA	100	92.623	ENSEASG00005015926	RTCA	100	92.623	Equus_asinus_asinus
ENSPCIG00000007684	RTCA	100	92.623	ENSECAG00000019831	RTCA	100	92.623	Equus_caballus
ENSPCIG00000007684	RTCA	91	81.792	ENSEEUG00000001165	RTCA	100	81.792	Erinaceus_europaeus
ENSPCIG00000007684	RTCA	99	71.191	ENSELUG00000003741	rtca	99	71.191	Esox_lucius
ENSPCIG00000007684	RTCA	100	92.350	ENSFCAG00000024460	RTCA	100	92.350	Felis_catus
ENSPCIG00000007684	RTCA	93	82.647	ENSFALG00000002443	RTCA	91	82.647	Ficedula_albicollis
ENSPCIG00000007684	RTCA	98	70.166	ENSFDAG00000016084	-	100	70.166	Fukomys_damarensis
ENSPCIG00000007684	RTCA	100	90.437	ENSFDAG00000012070	-	100	90.437	Fukomys_damarensis
ENSPCIG00000007684	RTCA	55	72.139	ENSFHEG00000002868	rtca	90	69.524	Fundulus_heteroclitus
ENSPCIG00000007684	RTCA	100	68.852	ENSGMOG00000013264	rtca	100	68.852	Gadus_morhua
ENSPCIG00000007684	RTCA	100	82.514	ENSGALG00000005277	RTCA	100	82.514	Gallus_gallus
ENSPCIG00000007684	RTCA	100	71.311	ENSGAFG00000011853	rtca	99	71.311	Gambusia_affinis
ENSPCIG00000007684	RTCA	100	69.945	ENSGACG00000013497	rtca	100	69.945	Gasterosteus_aculeatus
ENSPCIG00000007684	RTCA	80	86.007	ENSGAGG00000023306	RTCA	100	86.007	Gopherus_agassizii
ENSPCIG00000007684	RTCA	100	89.891	ENSGGOG00000044018	-	100	89.891	Gorilla_gorilla
ENSPCIG00000007684	RTCA	100	90.437	ENSGGOG00000009546	-	100	90.437	Gorilla_gorilla
ENSPCIG00000007684	RTCA	100	69.945	ENSHBUG00000002114	rtca	99	69.945	Haplochromis_burtoni
ENSPCIG00000007684	RTCA	100	89.071	ENSHGLG00000002617	RTCA	100	89.071	Heterocephalus_glaber_female
ENSPCIG00000007684	RTCA	100	89.071	ENSHGLG00100006056	RTCA	100	89.071	Heterocephalus_glaber_male
ENSPCIG00000007684	RTCA	99	64.543	ENSHCOG00000020628	rtca	88	64.543	Hippocampus_comes
ENSPCIG00000007684	RTCA	100	72.951	ENSIPUG00000024803	rtca	100	72.951	Ictalurus_punctatus
ENSPCIG00000007684	RTCA	100	83.880	ENSSTOG00000013528	-	100	83.880	Ictidomys_tridecemlineatus
ENSPCIG00000007684	RTCA	100	79.019	ENSSTOG00000033099	-	100	79.019	Ictidomys_tridecemlineatus
ENSPCIG00000007684	RTCA	100	64.754	ENSJJAG00000016178	Rtca	100	64.754	Jaculus_jaculus
ENSPCIG00000007684	RTCA	99	71.468	ENSKMAG00000006651	rtca	98	71.468	Kryptolebias_marmoratus
ENSPCIG00000007684	RTCA	99	70.637	ENSLBEG00000028971	rtca	99	70.637	Labrus_bergylta
ENSPCIG00000007684	RTCA	88	70.093	ENSLBEG00000002448	-	99	70.093	Labrus_bergylta
ENSPCIG00000007684	RTCA	100	78.689	ENSLACG00000013666	RTCA	100	78.689	Latimeria_chalumnae
ENSPCIG00000007684	RTCA	100	74.317	ENSLOCG00000000093	rtca	99	74.317	Lepisosteus_oculatus
ENSPCIG00000007684	RTCA	100	90.164	ENSLAFG00000001473	RTCA	100	90.164	Loxodonta_africana
ENSPCIG00000007684	RTCA	100	90.710	ENSMFAG00000034132	RTCA	100	90.710	Macaca_fascicularis
ENSPCIG00000007684	RTCA	100	90.164	ENSMMUG00000019105	RTCA	100	90.164	Macaca_mulatta
ENSPCIG00000007684	RTCA	84	89.968	ENSMNEG00000037163	RTCA	100	89.968	Macaca_nemestrina
ENSPCIG00000007684	RTCA	100	74.863	ENSMLEG00000042151	RTCA	100	74.863	Mandrillus_leucophaeus
ENSPCIG00000007684	RTCA	100	71.858	ENSMAMG00000016536	rtca	100	71.858	Mastacembelus_armatus
ENSPCIG00000007684	RTCA	100	70.219	ENSMZEG00005017945	rtca	99	70.219	Maylandia_zebra
ENSPCIG00000007684	RTCA	87	80.878	ENSMGAG00000006892	RTCA	99	80.878	Meleagris_gallopavo
ENSPCIG00000007684	RTCA	100	88.251	ENSMAUG00000008488	Rtca	100	88.251	Mesocricetus_auratus
ENSPCIG00000007684	RTCA	84	90.291	ENSMICG00000008643	RTCA	100	90.291	Microcebus_murinus
ENSPCIG00000007684	RTCA	100	89.071	ENSMOCG00000016660	Rtca	100	89.071	Microtus_ochrogaster
ENSPCIG00000007684	RTCA	84	71.242	ENSMMOG00000007750	rtca	99	71.242	Mola_mola
ENSPCIG00000007684	RTCA	100	96.721	ENSMODG00000003557	RTCA	100	96.721	Monodelphis_domestica
ENSPCIG00000007684	RTCA	100	72.131	ENSMALG00000020844	rtca	100	72.131	Monopterus_albus
ENSPCIG00000007684	RTCA	100	87.158	MGP_CAROLIEiJ_G0025565	Rtca	100	87.158	Mus_caroli
ENSPCIG00000007684	RTCA	100	86.612	ENSMUSG00000000339	Rtca	100	86.620	Mus_musculus
ENSPCIG00000007684	RTCA	100	86.885	MGP_PahariEiJ_G0027011	Rtca	100	86.885	Mus_pahari
ENSPCIG00000007684	RTCA	100	86.885	MGP_SPRETEiJ_G0026515	Rtca	100	86.885	Mus_spretus
ENSPCIG00000007684	RTCA	100	92.077	ENSMPUG00000012119	RTCA	100	92.077	Mustela_putorius_furo
ENSPCIG00000007684	RTCA	100	84.469	ENSMLUG00000009922	RTCA	100	84.469	Myotis_lucifugus
ENSPCIG00000007684	RTCA	100	88.251	ENSNGAG00000011540	Rtca	99	88.251	Nannospalax_galili
ENSPCIG00000007684	RTCA	100	70.219	ENSNBRG00000003062	rtca	99	70.219	Neolamprologus_brichardi
ENSPCIG00000007684	RTCA	100	90.710	ENSNLEG00000031426	RTCA	100	90.710	Nomascus_leucogenys
ENSPCIG00000007684	RTCA	76	78.788	ENSMEUG00000010030	-	77	78.788	Notamacropus_eugenii
ENSPCIG00000007684	RTCA	73	84.758	ENSOPRG00000012092	RTCA	71	84.758	Ochotona_princeps
ENSPCIG00000007684	RTCA	95	89.655	ENSODEG00000006990	RTCA	96	89.744	Octodon_degus
ENSPCIG00000007684	RTCA	100	69.945	ENSONIG00000007753	rtca	99	69.945	Oreochromis_niloticus
ENSPCIG00000007684	RTCA	87	88.959	ENSOANG00000012055	RTCA	98	88.959	Ornithorhynchus_anatinus
ENSPCIG00000007684	RTCA	100	91.530	ENSOCUG00000014247	RTCA	100	91.530	Oryctolagus_cuniculus
ENSPCIG00000007684	RTCA	100	71.311	ENSORLG00000013605	rtca	100	71.311	Oryzias_latipes
ENSPCIG00000007684	RTCA	100	71.311	ENSORLG00020001904	rtca	100	71.311	Oryzias_latipes_hni
ENSPCIG00000007684	RTCA	100	71.311	ENSORLG00015021064	rtca	100	71.311	Oryzias_latipes_hsok
ENSPCIG00000007684	RTCA	100	71.311	ENSOMEG00000000756	rtca	100	71.311	Oryzias_melastigma
ENSPCIG00000007684	RTCA	100	81.421	ENSOGAG00000005627	RTCA	100	81.421	Otolemur_garnettii
ENSPCIG00000007684	RTCA	87	90.252	ENSOARG00000018122	RTCA	100	90.252	Ovis_aries
ENSPCIG00000007684	RTCA	100	87.599	ENSPPAG00000035119	RTCA	100	90.291	Pan_paniscus
ENSPCIG00000007684	RTCA	100	92.350	ENSPPRG00000000350	RTCA	100	92.350	Panthera_pardus
ENSPCIG00000007684	RTCA	100	92.077	ENSPTIG00000012816	RTCA	100	92.077	Panthera_tigris_altaica
ENSPCIG00000007684	RTCA	100	87.071	ENSPTRG00000001004	RTCA	100	89.644	Pan_troglodytes
ENSPCIG00000007684	RTCA	100	90.710	ENSPANG00000000346	RTCA	100	90.710	Papio_anubis
ENSPCIG00000007684	RTCA	100	73.770	ENSPKIG00000001653	rtca	100	73.770	Paramormyrops_kingsleyae
ENSPCIG00000007684	RTCA	100	85.519	ENSPSIG00000011408	RTCA	100	85.519	Pelodiscus_sinensis
ENSPCIG00000007684	RTCA	100	88.798	ENSPEMG00000018582	Rtca	100	88.798	Peromyscus_maniculatus_bairdii
ENSPCIG00000007684	RTCA	100	57.221	ENSPMAG00000009110	rtca	100	57.221	Petromyzon_marinus
ENSPCIG00000007684	RTCA	100	71.662	ENSPFOG00000004824	rtca	100	71.662	Poecilia_formosa
ENSPCIG00000007684	RTCA	100	71.858	ENSPLAG00000011753	rtca	99	71.858	Poecilia_latipinna
ENSPCIG00000007684	RTCA	100	71.858	ENSPMEG00000020469	rtca	99	71.858	Poecilia_mexicana
ENSPCIG00000007684	RTCA	100	72.678	ENSPREG00000001365	rtca	99	72.678	Poecilia_reticulata
ENSPCIG00000007684	RTCA	100	90.437	ENSPPYG00000001115	RTCA	100	90.437	Pongo_abelii
ENSPCIG00000007684	RTCA	100	86.885	ENSPCAG00000005076	RTCA	100	86.885	Procavia_capensis
ENSPCIG00000007684	RTCA	100	91.257	ENSPCOG00000005603	RTCA	100	91.257	Propithecus_coquereli
ENSPCIG00000007684	RTCA	100	87.599	ENSPVAG00000009478	RTCA	100	87.599	Pteropus_vampyrus
ENSPCIG00000007684	RTCA	100	70.219	ENSPNYG00000004722	rtca	99	70.219	Pundamilia_nyererei
ENSPCIG00000007684	RTCA	100	72.951	ENSPNAG00000022270	rtca	100	72.951	Pygocentrus_nattereri
ENSPCIG00000007684	RTCA	100	87.705	ENSRNOG00000014575	Rtca	100	87.705	Rattus_norvegicus
ENSPCIG00000007684	RTCA	100	86.807	ENSRBIG00000041180	RTCA	100	88.997	Rhinopithecus_bieti
ENSPCIG00000007684	RTCA	100	89.891	ENSRROG00000024929	RTCA	100	89.891	Rhinopithecus_roxellana
ENSPCIG00000007684	RTCA	100	89.617	ENSSBOG00000028626	RTCA	100	89.617	Saimiri_boliviensis_boliviensis
ENSPCIG00000007684	RTCA	100	97.541	ENSSHAG00000001758	RTCA	100	97.541	Sarcophilus_harrisii
ENSPCIG00000007684	RTCA	98	68.889	ENSSMAG00000014680	rtca	97	68.889	Scophthalmus_maximus
ENSPCIG00000007684	RTCA	98	71.667	ENSSDUG00000015585	rtca	97	71.667	Seriola_dumerili
ENSPCIG00000007684	RTCA	96	71.795	ENSSLDG00000018985	rtca	95	71.795	Seriola_lalandi_dorsalis
ENSPCIG00000007684	RTCA	87	83.281	ENSSARG00000013993	RTCA	100	83.281	Sorex_araneus
ENSPCIG00000007684	RTCA	100	70.219	ENSSPAG00000011938	rtca	99	70.219	Stegastes_partitus
ENSPCIG00000007684	RTCA	100	91.803	ENSSSCG00000006865	RTCA	100	91.803	Sus_scrofa
ENSPCIG00000007684	RTCA	100	83.060	ENSTGUG00000005154	RTCA	100	83.060	Taeniopygia_guttata
ENSPCIG00000007684	RTCA	100	71.038	ENSTRUG00000008799	rtca	100	71.038	Takifugu_rubripes
ENSPCIG00000007684	RTCA	100	71.311	ENSTNIG00000004725	rtca	100	71.311	Tetraodon_nigroviridis
ENSPCIG00000007684	RTCA	59	80.909	ENSTBEG00000000943	RTCA	82	63.025	Tupaia_belangeri
ENSPCIG00000007684	RTCA	100	87.071	ENSTTRG00000015327	RTCA	100	87.071	Tursiops_truncatus
ENSPCIG00000007684	RTCA	94	90.087	ENSUAMG00000017265	RTCA	96	90.087	Ursus_americanus
ENSPCIG00000007684	RTCA	100	90.984	ENSUMAG00000007881	RTCA	100	90.984	Ursus_maritimus
ENSPCIG00000007684	RTCA	87	82.019	ENSVPAG00000001039	RTCA	84	82.019	Vicugna_pacos
ENSPCIG00000007684	RTCA	100	91.530	ENSVVUG00000022041	RTCA	68	91.530	Vulpes_vulpes
ENSPCIG00000007684	RTCA	99	65.123	ENSXETG00000031661	RTCA	99	65.123	Xenopus_tropicalis
ENSPCIG00000007684	RTCA	100	62.568	ENSXCOG00000008002	rtca	100	62.568	Xiphophorus_couchianus
ENSPCIG00000007684	RTCA	100	71.585	ENSXMAG00000005482	rtca	99	71.585	Xiphophorus_maculatus