EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000008765 (Gene tree)
Gene ID: 110220214
Gene Symbol: SF3B4
Alias: -
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 3371 bases
Position: chrFUWB01000379.1:57434-60804
Accession: 110220214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000010816	RRM_1	PF00076.22	4e-39	1	2
ENSPCIP00000010816	RRM_1	PF00076.22	4e-39	2	2
ENSPCIP00000010815	RRM_1	PF00076.22	4.1e-39	1	2
ENSPCIP00000010815	RRM_1	PF00076.22	4.1e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000013521	SF3B4-201	1828	-	ENSPCIP00000010815	427 (aa)	-	-
ENSPCIT00000013522	SF3B4-202	1819	-	ENSPCIP00000010816	424 (aa)	XP_020859845	UPI0000D92324

Gene Model

Click here to download ENSPCIG00000008765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000008765's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000008765	SF3B4	70	40.984	ENSPCIG00000000267	-	68	38.690
ENSPCIG00000008765	SF3B4	67	39.344	ENSPCIG00000006048	-	56	39.344

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000008765	SF3B4	100	99.057	ENSG00000143368	SF3B4	100	100.000	Homo_sapiens
ENSPCIG00000008765	SF3B4	57	96.667	ENSAPOG00000017647	sf3b4	77	82.445	Acanthochromis_polyacanthus
ENSPCIG00000008765	SF3B4	100	99.292	ENSAMEG00000010073	SF3B4	100	99.292	Ailuropoda_melanoleuca
ENSPCIG00000008765	SF3B4	54	96.104	ENSACIG00000018455	sf3b4	67	96.930	Amphilophus_citrinellus
ENSPCIG00000008765	SF3B4	57	96.667	ENSAOCG00000019801	sf3b4	77	82.445	Amphiprion_ocellaris
ENSPCIG00000008765	SF3B4	57	96.667	ENSAPEG00000010365	sf3b4	77	82.445	Amphiprion_percula
ENSPCIG00000008765	SF3B4	57	96.250	ENSATEG00000012844	sf3b4	76	81.562	Anabas_testudineus
ENSPCIG00000008765	SF3B4	62	96.198	ENSACAG00000010019	SF3B4	90	90.339	Anolis_carolinensis
ENSPCIG00000008765	SF3B4	100	99.057	ENSANAG00000031025	SF3B4	100	99.057	Aotus_nancymaae
ENSPCIG00000008765	SF3B4	57	95.833	ENSACLG00000014260	sf3b4	76	81.505	Astatotilapia_calliptera
ENSPCIG00000008765	SF3B4	57	96.250	ENSAMXG00000008282	sf3b4	60	96.250	Astyanax_mexicanus
ENSPCIG00000008765	SF3B4	100	99.292	ENSBTAG00000012495	SF3B4	100	99.292	Bos_taurus
ENSPCIG00000008765	SF3B4	90	96.335	ENSBTAG00000012793	-	94	96.335	Bos_taurus
ENSPCIG00000008765	SF3B4	90	81.787	ENSCJAG00000042351	SF3B4	87	81.787	Callithrix_jacchus
ENSPCIG00000008765	SF3B4	100	98.821	ENSCAFG00000011617	SF3B4	100	98.821	Canis_familiaris
ENSPCIG00000008765	SF3B4	100	98.821	ENSCAFG00020019775	SF3B4	100	98.821	Canis_lupus_dingo
ENSPCIG00000008765	SF3B4	100	99.292	ENSCHIG00000025663	-	100	99.292	Capra_hircus
ENSPCIG00000008765	SF3B4	100	99.057	ENSTSYG00000009295	SF3B4	100	99.057	Carlito_syrichta
ENSPCIG00000008765	SF3B4	100	99.057	ENSCPOG00000008267	SF3B4	100	99.057	Cavia_porcellus
ENSPCIG00000008765	SF3B4	95	84.826	ENSCCAG00000019823	-	77	86.196	Cebus_capucinus
ENSPCIG00000008765	SF3B4	100	86.334	ENSCCAG00000021751	-	69	92.593	Cebus_capucinus
ENSPCIG00000008765	SF3B4	100	99.057	ENSCATG00000033114	SF3B4	100	99.057	Cercocebus_atys
ENSPCIG00000008765	SF3B4	100	99.057	ENSCLAG00000015851	SF3B4	100	99.057	Chinchilla_lanigera
ENSPCIG00000008765	SF3B4	100	99.057	ENSCSAG00000018129	SF3B4	100	99.057	Chlorocebus_sabaeus
ENSPCIG00000008765	SF3B4	99	86.557	ENSCPBG00000008041	SF3B4	91	91.146	Chrysemys_picta_bellii
ENSPCIG00000008765	SF3B4	50	90.698	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSPCIG00000008765	SF3B4	100	99.057	ENSCANG00000035579	SF3B4	100	99.057	Colobus_angolensis_palliatus
ENSPCIG00000008765	SF3B4	100	99.057	ENSCGRG00001003590	Sf3b4	100	99.057	Cricetulus_griseus_chok1gshd
ENSPCIG00000008765	SF3B4	100	99.057	ENSCGRG00000016914	Sf3b4	100	99.057	Cricetulus_griseus_crigri
ENSPCIG00000008765	SF3B4	57	96.250	ENSDARG00000018574	sf3b4	77	80.878	Danio_rerio
ENSPCIG00000008765	SF3B4	98	96.394	ENSDNOG00000048908	-	99	96.394	Dasypus_novemcinctus
ENSPCIG00000008765	SF3B4	97	80.387	ENSDNOG00000037231	-	76	81.789	Dasypus_novemcinctus
ENSPCIG00000008765	SF3B4	100	99.292	ENSDORG00000016366	Sf3b4	100	99.292	Dipodomys_ordii
ENSPCIG00000008765	SF3B4	52	86.425	FBgn0015818	Spx	61	88.152	Drosophila_melanogaster
ENSPCIG00000008765	SF3B4	77	91.743	ENSETEG00000008963	SF3B4	76	92.593	Echinops_telfairi
ENSPCIG00000008765	SF3B4	100	99.292	ENSEASG00005001477	SF3B4	100	99.292	Equus_asinus_asinus
ENSPCIG00000008765	SF3B4	100	99.292	ENSECAG00000024737	SF3B4	100	99.292	Equus_caballus
ENSPCIG00000008765	SF3B4	100	99.292	ENSFCAG00000010106	SF3B4	100	99.292	Felis_catus
ENSPCIG00000008765	SF3B4	100	99.057	ENSFDAG00000009286	SF3B4	100	99.057	Fukomys_damarensis
ENSPCIG00000008765	SF3B4	54	96.957	ENSGMOG00000002519	sf3b4	67	97.368	Gadus_morhua
ENSPCIG00000008765	SF3B4	99	89.598	ENSGALG00000013352	SF3B4	90	90.078	Gallus_gallus
ENSPCIG00000008765	SF3B4	63	92.453	ENSGAFG00000010181	sf3b4	58	97.807	Gambusia_affinis
ENSPCIG00000008765	SF3B4	99	86.321	ENSGAGG00000025055	SF3B4	79	90.885	Gopherus_agassizii
ENSPCIG00000008765	SF3B4	100	72.877	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSPCIG00000008765	SF3B4	100	99.057	ENSGGOG00000004761	SF3B4	100	99.057	Gorilla_gorilla
ENSPCIG00000008765	SF3B4	57	95.833	ENSHBUG00000002028	sf3b4	76	81.505	Haplochromis_burtoni
ENSPCIG00000008765	SF3B4	100	99.057	ENSHGLG00000012360	SF3B4	100	99.057	Heterocephalus_glaber_female
ENSPCIG00000008765	SF3B4	100	97.877	ENSHGLG00100008533	SF3B4	100	97.877	Heterocephalus_glaber_male
ENSPCIG00000008765	SF3B4	50	99.531	ENSHCOG00000003014	sf3b4	57	96.491	Hippocampus_comes
ENSPCIG00000008765	SF3B4	57	96.667	ENSIPUG00000012242	Sf3b4	77	81.250	Ictalurus_punctatus
ENSPCIG00000008765	SF3B4	100	99.292	ENSSTOG00000000684	-	100	99.292	Ictidomys_tridecemlineatus
ENSPCIG00000008765	SF3B4	93	71.247	ENSSTOG00000029627	-	74	67.913	Ictidomys_tridecemlineatus
ENSPCIG00000008765	SF3B4	76	84.052	ENSJJAG00000022500	Sf3b4	95	84.052	Jaculus_jaculus
ENSPCIG00000008765	SF3B4	56	96.203	ENSKMAG00000008154	sf3b4	58	98.246	Kryptolebias_marmoratus
ENSPCIG00000008765	SF3B4	55	97.425	ENSLBEG00000026818	sf3b4	57	98.246	Labrus_bergylta
ENSPCIG00000008765	SF3B4	57	95.473	ENSLACG00000004436	SF3B4	87	85.938	Latimeria_chalumnae
ENSPCIG00000008765	SF3B4	57	95.885	ENSLOCG00000009048	sf3b4	75	85.580	Lepisosteus_oculatus
ENSPCIG00000008765	SF3B4	100	98.824	ENSLAFG00000008531	SF3B4	100	98.824	Loxodonta_africana
ENSPCIG00000008765	SF3B4	100	99.057	ENSMFAG00000042395	SF3B4	100	99.057	Macaca_fascicularis
ENSPCIG00000008765	SF3B4	93	70.960	ENSMFAG00000039067	-	57	80.841	Macaca_fascicularis
ENSPCIG00000008765	SF3B4	100	99.057	ENSMMUG00000007256	SF3B4	100	99.057	Macaca_mulatta
ENSPCIG00000008765	SF3B4	100	99.057	ENSMNEG00000031839	SF3B4	100	99.057	Macaca_nemestrina
ENSPCIG00000008765	SF3B4	93	70.455	ENSMNEG00000031526	-	57	80.374	Macaca_nemestrina
ENSPCIG00000008765	SF3B4	100	99.057	ENSMLEG00000038667	SF3B4	100	99.057	Mandrillus_leucophaeus
ENSPCIG00000008765	SF3B4	57	97.083	ENSMAMG00000014692	sf3b4	60	97.083	Mastacembelus_armatus
ENSPCIG00000008765	SF3B4	57	95.833	ENSMZEG00005026741	sf3b4	76	81.505	Maylandia_zebra
ENSPCIG00000008765	SF3B4	99	88.416	ENSMGAG00000000653	SF3B4	91	88.083	Meleagris_gallopavo
ENSPCIG00000008765	SF3B4	100	99.057	ENSMAUG00000015266	Sf3b4	100	99.057	Mesocricetus_auratus
ENSPCIG00000008765	SF3B4	100	99.292	ENSMICG00000044961	SF3B4	100	99.292	Microcebus_murinus
ENSPCIG00000008765	SF3B4	98	93.976	ENSMOCG00000014155	-	100	93.976	Microtus_ochrogaster
ENSPCIG00000008765	SF3B4	100	99.057	ENSMOCG00000013658	-	100	99.057	Microtus_ochrogaster
ENSPCIG00000008765	SF3B4	54	97.826	ENSMMOG00000018032	sf3b4	58	97.807	Mola_mola
ENSPCIG00000008765	SF3B4	100	100.000	ENSMODG00000018767	SF3B4	100	100.000	Monodelphis_domestica
ENSPCIG00000008765	SF3B4	54	97.797	ENSMALG00000006174	sf3b4	57	97.368	Monopterus_albus
ENSPCIG00000008765	SF3B4	100	98.821	MGP_CAROLIEiJ_G0025365	Sf3b4	100	98.821	Mus_caroli
ENSPCIG00000008765	SF3B4	100	99.057	ENSMUSG00000068856	Sf3b4	100	99.057	Mus_musculus
ENSPCIG00000008765	SF3B4	100	99.057	MGP_PahariEiJ_G0026809	Sf3b4	100	99.057	Mus_pahari
ENSPCIG00000008765	SF3B4	100	99.057	MGP_SPRETEiJ_G0026309	Sf3b4	100	99.057	Mus_spretus
ENSPCIG00000008765	SF3B4	100	99.292	ENSMPUG00000005563	SF3B4	100	99.292	Mustela_putorius_furo
ENSPCIG00000008765	SF3B4	100	99.057	ENSMLUG00000010789	SF3B4	100	99.057	Myotis_lucifugus
ENSPCIG00000008765	SF3B4	100	98.821	ENSNGAG00000016337	Sf3b4	100	98.821	Nannospalax_galili
ENSPCIG00000008765	SF3B4	57	96.250	ENSNBRG00000013865	sf3b4	76	81.818	Neolamprologus_brichardi
ENSPCIG00000008765	SF3B4	100	76.179	ENSNLEG00000000537	-	82	84.568	Nomascus_leucogenys
ENSPCIG00000008765	SF3B4	100	69.393	ENSNLEG00000009693	-	100	69.393	Nomascus_leucogenys
ENSPCIG00000008765	SF3B4	81	100.000	ENSMEUG00000003272	SF3B4	82	100.000	Notamacropus_eugenii
ENSPCIG00000008765	SF3B4	99	96.675	ENSOPRG00000010808	SF3B4	99	96.675	Ochotona_princeps
ENSPCIG00000008765	SF3B4	75	86.751	ENSODEG00000003597	-	79	86.751	Octodon_degus
ENSPCIG00000008765	SF3B4	88	72.922	ENSODEG00000008916	-	84	71.827	Octodon_degus
ENSPCIG00000008765	SF3B4	56	95.359	ENSONIG00000002730	sf3b4	57	97.807	Oreochromis_niloticus
ENSPCIG00000008765	SF3B4	99	58.140	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSPCIG00000008765	SF3B4	100	99.292	ENSOCUG00000004614	SF3B4	100	99.292	Oryctolagus_cuniculus
ENSPCIG00000008765	SF3B4	55	96.983	ENSORLG00000003062	sf3b4	59	97.807	Oryzias_latipes
ENSPCIG00000008765	SF3B4	55	96.983	ENSORLG00020000687	sf3b4	57	97.807	Oryzias_latipes_hni
ENSPCIG00000008765	SF3B4	55	96.983	ENSORLG00015010989	sf3b4	57	97.807	Oryzias_latipes_hsok
ENSPCIG00000008765	SF3B4	100	99.292	ENSOGAG00000006265	SF3B4	100	99.292	Otolemur_garnettii
ENSPCIG00000008765	SF3B4	86	78.571	ENSOARG00000007368	-	77	79.375	Ovis_aries
ENSPCIG00000008765	SF3B4	100	99.292	ENSOARG00000020718	-	100	99.292	Ovis_aries
ENSPCIG00000008765	SF3B4	100	99.057	ENSPPAG00000040904	SF3B4	100	99.057	Pan_paniscus
ENSPCIG00000008765	SF3B4	100	81.368	ENSPPAG00000030024	-	78	82.716	Pan_paniscus
ENSPCIG00000008765	SF3B4	100	99.292	ENSPPRG00000007384	SF3B4	100	99.292	Panthera_pardus
ENSPCIG00000008765	SF3B4	100	99.292	ENSPTIG00000014530	SF3B4	100	99.292	Panthera_tigris_altaica
ENSPCIG00000008765	SF3B4	100	99.057	ENSPTRG00000001243	SF3B4	100	99.057	Pan_troglodytes
ENSPCIG00000008765	SF3B4	100	78.538	ENSPTRG00000049727	-	59	90.254	Pan_troglodytes
ENSPCIG00000008765	SF3B4	100	99.057	ENSPANG00000005126	SF3B4	100	99.057	Papio_anubis
ENSPCIG00000008765	SF3B4	55	97.425	ENSPKIG00000020669	sf3b4	60	98.246	Paramormyrops_kingsleyae
ENSPCIG00000008765	SF3B4	100	99.057	ENSPEMG00000017568	Sf3b4	100	99.057	Peromyscus_maniculatus_bairdii
ENSPCIG00000008765	SF3B4	61	88.716	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSPCIG00000008765	SF3B4	56	95.359	ENSPFOG00000005754	sf3b4	58	97.368	Poecilia_formosa
ENSPCIG00000008765	SF3B4	56	95.359	ENSPLAG00000001401	sf3b4	63	97.368	Poecilia_latipinna
ENSPCIG00000008765	SF3B4	56	95.359	ENSPREG00000011076	sf3b4	57	97.807	Poecilia_reticulata
ENSPCIG00000008765	SF3B4	63	96.635	ENSPCAG00000000392	SF3B4	63	96.635	Procavia_capensis
ENSPCIG00000008765	SF3B4	100	99.292	ENSPCOG00000015399	SF3B4	100	99.292	Propithecus_coquereli
ENSPCIG00000008765	SF3B4	100	99.292	ENSPVAG00000014171	SF3B4	100	99.292	Pteropus_vampyrus
ENSPCIG00000008765	SF3B4	57	95.833	ENSPNYG00000012700	sf3b4	76	81.505	Pundamilia_nyererei
ENSPCIG00000008765	SF3B4	57	96.667	ENSPNAG00000000686	sf3b4	79	80.938	Pygocentrus_nattereri
ENSPCIG00000008765	SF3B4	100	99.057	ENSRNOG00000021181	Sf3b4	100	99.057	Rattus_norvegicus
ENSPCIG00000008765	SF3B4	100	99.057	ENSRBIG00000043392	SF3B4	100	99.057	Rhinopithecus_bieti
ENSPCIG00000008765	SF3B4	100	99.057	ENSRROG00000029366	SF3B4	100	99.057	Rhinopithecus_roxellana
ENSPCIG00000008765	SF3B4	92	70.951	ENSRROG00000028213	-	91	67.380	Rhinopithecus_roxellana
ENSPCIG00000008765	SF3B4	100	98.821	ENSSBOG00000012310	-	100	98.821	Saimiri_boliviensis_boliviensis
ENSPCIG00000008765	SF3B4	100	73.113	ENSSBOG00000025174	-	73	79.567	Saimiri_boliviensis_boliviensis
ENSPCIG00000008765	SF3B4	100	97.406	ENSSHAG00000004043	SF3B4	100	99.738	Sarcophilus_harrisii
ENSPCIG00000008765	SF3B4	56	96.624	ENSSFOG00015008864	sf3b4	56	98.246	Scleropages_formosus
ENSPCIG00000008765	SF3B4	57	96.667	ENSSMAG00000006837	sf3b4	77	82.132	Scophthalmus_maximus
ENSPCIG00000008765	SF3B4	57	97.083	ENSSDUG00000012064	sf3b4	76	82.188	Seriola_dumerili
ENSPCIG00000008765	SF3B4	57	97.083	ENSSLDG00000014226	sf3b4	60	97.083	Seriola_lalandi_dorsalis
ENSPCIG00000008765	SF3B4	72	95.102	ENSSPUG00000001028	SF3B4	57	98.684	Sphenodon_punctatus
ENSPCIG00000008765	SF3B4	57	97.500	ENSSPAG00000019219	sf3b4	76	82.500	Stegastes_partitus
ENSPCIG00000008765	SF3B4	85	64.365	ENSSSCG00000039440	-	79	65.741	Sus_scrofa
ENSPCIG00000008765	SF3B4	100	99.057	ENSSSCG00000006665	-	100	99.057	Sus_scrofa
ENSPCIG00000008765	SF3B4	56	97.034	ENSTGUG00000004470	SF3B4	90	98.246	Taeniopygia_guttata
ENSPCIG00000008765	SF3B4	54	96.916	ENSTRUG00000004516	sf3b4	57	96.491	Takifugu_rubripes
ENSPCIG00000008765	SF3B4	54	96.957	ENSTNIG00000009156	sf3b4	58	97.368	Tetraodon_nigroviridis
ENSPCIG00000008765	SF3B4	100	99.292	ENSTTRG00000005217	SF3B4	100	99.292	Tursiops_truncatus
ENSPCIG00000008765	SF3B4	100	99.292	ENSUAMG00000022468	SF3B4	100	99.292	Ursus_americanus
ENSPCIG00000008765	SF3B4	100	98.349	ENSUMAG00000003802	SF3B4	100	98.349	Ursus_maritimus
ENSPCIG00000008765	SF3B4	97	99.272	ENSVPAG00000008152	SF3B4	100	99.272	Vicugna_pacos
ENSPCIG00000008765	SF3B4	65	96.014	ENSVVUG00000022697	-	58	96.014	Vulpes_vulpes
ENSPCIG00000008765	SF3B4	99	92.105	ENSVVUG00000007732	-	100	92.105	Vulpes_vulpes
ENSPCIG00000008765	SF3B4	54	97.391	ENSXCOG00000019895	sf3b4	58	97.807	Xiphophorus_couchianus
ENSPCIG00000008765	SF3B4	54	97.391	ENSXMAG00000003772	sf3b4	58	97.807	Xiphophorus_maculatus