EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000009185 (Gene tree)
Gene ID: 110196882
Gene Symbol: RIF1
Alias: -
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 53287 bases
Position: chrFUWB01004102.1:29387-82673
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000011447	Rif1_N	PF12231.8	5.7e-76	1	1
ENSPCIP00000011444	Rif1_N	PF12231.8	5.7e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000014246	RIF1-202	7093	-	ENSPCIP00000011447	2360 (aa)	-	-
ENSPCIT00000014240	RIF1-201	7171	-	ENSPCIP00000011444	2386 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000009185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000009185's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000009185	RIF1	67	50.038	ENSAPOG00000011073	rif1	65	50.115	Acanthochromis_polyacanthus
ENSPCIG00000009185	RIF1	99	60.782	ENSAMEG00000008461	RIF1	100	60.370	Ailuropoda_melanoleuca
ENSPCIG00000009185	RIF1	65	51.537	ENSACIG00000017765	rif1	68	51.537	Amphilophus_citrinellus
ENSPCIG00000009185	RIF1	68	49.885	ENSAOCG00000017231	rif1	67	49.885	Amphiprion_ocellaris
ENSPCIG00000009185	RIF1	68	58.056	ENSAPEG00000013228	rif1	65	58.056	Amphiprion_percula
ENSPCIG00000009185	RIF1	77	49.383	ENSATEG00000022887	rif1	67	49.275	Anabas_testudineus
ENSPCIG00000009185	RIF1	88	69.048	ENSAPLG00000007092	RIF1	93	69.048	Anas_platyrhynchos
ENSPCIG00000009185	RIF1	86	63.175	ENSACAG00000003714	RIF1	90	63.175	Anolis_carolinensis
ENSPCIG00000009185	RIF1	99	59.479	ENSANAG00000024840	RIF1	99	59.360	Aotus_nancymaae
ENSPCIG00000009185	RIF1	52	51.978	ENSAMXG00000010910	rif1	64	52.157	Astyanax_mexicanus
ENSPCIG00000009185	RIF1	93	59.211	ENSBTAG00000021020	RIF1	99	58.950	Bos_taurus
ENSPCIG00000009185	RIF1	99	59.543	ENSCJAG00000003138	RIF1	99	59.496	Callithrix_jacchus
ENSPCIG00000009185	RIF1	99	59.273	ENSCAFG00000005670	RIF1	97	59.145	Canis_familiaris
ENSPCIG00000009185	RIF1	99	60.114	ENSCAFG00020016401	RIF1	99	59.450	Canis_lupus_dingo
ENSPCIG00000009185	RIF1	99	59.141	ENSCHIG00000020327	RIF1	93	64.747	Capra_hircus
ENSPCIG00000009185	RIF1	99	57.354	ENSTSYG00000008861	RIF1	97	68.675	Carlito_syrichta
ENSPCIG00000009185	RIF1	81	65.116	ENSCAPG00000008957	RIF1	94	65.116	Cavia_aperea
ENSPCIG00000009185	RIF1	99	56.518	ENSCPOG00000037898	RIF1	100	55.855	Cavia_porcellus
ENSPCIG00000009185	RIF1	99	58.715	ENSCCAG00000024760	RIF1	99	58.680	Cebus_capucinus
ENSPCIG00000009185	RIF1	96	56.977	ENSCLAG00000001517	RIF1	100	56.769	Chinchilla_lanigera
ENSPCIG00000009185	RIF1	99	59.832	ENSCSAG00000016089	RIF1	99	59.424	Chlorocebus_sabaeus
ENSPCIG00000009185	RIF1	97	67.532	ENSCHOG00000007187	RIF1	97	67.532	Choloepus_hoffmanni
ENSPCIG00000009185	RIF1	97	73.077	ENSCPBG00000025885	RIF1	99	73.373	Chrysemys_picta_bellii
ENSPCIG00000009185	RIF1	99	58.641	ENSCANG00000028962	RIF1	98	64.989	Colobus_angolensis_palliatus
ENSPCIG00000009185	RIF1	99	56.348	ENSCGRG00001024589	Rif1	100	56.361	Cricetulus_griseus_chok1gshd
ENSPCIG00000009185	RIF1	98	56.927	ENSCGRG00000010713	Rif1	100	56.939	Cricetulus_griseus_crigri
ENSPCIG00000009185	RIF1	64	56.098	ENSCSEG00000003945	rif1	66	56.098	Cynoglossus_semilaevis
ENSPCIG00000009185	RIF1	66	48.497	ENSCVAG00000022479	rif1	67	48.497	Cyprinodon_variegatus
ENSPCIG00000009185	RIF1	83	60.000	ENSDNOG00000011194	RIF1	93	66.125	Dasypus_novemcinctus
ENSPCIG00000009185	RIF1	83	61.928	ENSETEG00000012421	RIF1	80	61.928	Echinops_telfairi
ENSPCIG00000009185	RIF1	94	86.184	ENSEASG00005023434	RIF1	98	86.184	Equus_asinus_asinus
ENSPCIG00000009185	RIF1	96	81.777	ENSECAG00000012679	RIF1	97	81.777	Equus_caballus
ENSPCIG00000009185	RIF1	72	49.562	ENSELUG00000006826	rif1	59	50.151	Esox_lucius
ENSPCIG00000009185	RIF1	97	66.237	ENSFCAG00000029742	RIF1	95	67.883	Felis_catus
ENSPCIG00000009185	RIF1	82	60.541	ENSFALG00000013874	RIF1	98	52.761	Ficedula_albicollis
ENSPCIG00000009185	RIF1	99	58.494	ENSFDAG00000006538	RIF1	99	58.333	Fukomys_damarensis
ENSPCIG00000009185	RIF1	65	51.062	ENSFHEG00000013721	rif1	66	50.321	Fundulus_heteroclitus
ENSPCIG00000009185	RIF1	60	60.000	ENSGMOG00000003517	rif1	86	60.000	Gadus_morhua
ENSPCIG00000009185	RIF1	85	61.290	ENSGALG00000012484	RIF1	93	64.535	Gallus_gallus
ENSPCIG00000009185	RIF1	73	50.960	ENSGAFG00000017196	rif1	67	54.675	Gambusia_affinis
ENSPCIG00000009185	RIF1	60	57.798	ENSGACG00000008579	rif1	65	54.393	Gasterosteus_aculeatus
ENSPCIG00000009185	RIF1	91	72.810	ENSGAGG00000012595	RIF1	99	73.112	Gopherus_agassizii
ENSPCIG00000009185	RIF1	89	79.857	ENSGGOG00000040178	RIF1	96	79.857	Gorilla_gorilla
ENSPCIG00000009185	RIF1	61	59.375	ENSHBUG00000007125	rif1	66	59.375	Haplochromis_burtoni
ENSPCIG00000009185	RIF1	94	57.403	ENSHGLG00100009807	RIF1	99	57.288	Heterocephalus_glaber_male
ENSPCIG00000009185	RIF1	65	49.601	ENSHCOG00000015943	rif1	59	49.721	Hippocampus_comes
ENSPCIG00000009185	RIF1	65	53.365	ENSIPUG00000021703	rif1	65	53.323	Ictalurus_punctatus
ENSPCIG00000009185	RIF1	94	66.912	ENSSTOG00000020712	RIF1	90	66.667	Ictidomys_tridecemlineatus
ENSPCIG00000009185	RIF1	99	56.477	ENSJJAG00000023000	Rif1	99	56.390	Jaculus_jaculus
ENSPCIG00000009185	RIF1	66	49.406	ENSKMAG00000002852	rif1	67	49.406	Kryptolebias_marmoratus
ENSPCIG00000009185	RIF1	66	50.554	ENSLBEG00000023196	rif1	61	50.949	Labrus_bergylta
ENSPCIG00000009185	RIF1	99	49.372	ENSLACG00000005425	RIF1	99	49.534	Latimeria_chalumnae
ENSPCIG00000009185	RIF1	65	53.165	ENSLOCG00000002657	rif1	81	50.804	Lepisosteus_oculatus
ENSPCIG00000009185	RIF1	99	59.566	ENSLAFG00000009796	RIF1	100	59.133	Loxodonta_africana
ENSPCIG00000009185	RIF1	99	59.928	ENSMFAG00000032233	RIF1	99	59.320	Macaca_fascicularis
ENSPCIG00000009185	RIF1	99	59.888	ENSMMUG00000008611	RIF1	99	59.280	Macaca_mulatta
ENSPCIG00000009185	RIF1	99	59.784	ENSMNEG00000031616	RIF1	99	59.280	Macaca_nemestrina
ENSPCIG00000009185	RIF1	71	49.209	ENSMAMG00000001745	rif1	65	49.248	Mastacembelus_armatus
ENSPCIG00000009185	RIF1	69	49.258	ENSMZEG00005020920	rif1	73	49.258	Maylandia_zebra
ENSPCIG00000009185	RIF1	89	57.468	ENSMGAG00000012732	RIF1	93	61.219	Meleagris_gallopavo
ENSPCIG00000009185	RIF1	74	81.111	ENSMAUG00000013158	Rif1	73	81.111	Mesocricetus_auratus
ENSPCIG00000009185	RIF1	75	59.373	ENSMOCG00000009381	Rif1	72	59.149	Microtus_ochrogaster
ENSPCIG00000009185	RIF1	65	49.675	ENSMMOG00000006519	rif1	64	49.675	Mola_mola
ENSPCIG00000009185	RIF1	99	84.565	ENSMODG00000003703	RIF1	99	84.730	Monodelphis_domestica
ENSPCIG00000009185	RIF1	68	47.880	ENSMALG00000016759	rif1	66	52.575	Monopterus_albus
ENSPCIG00000009185	RIF1	99	56.621	MGP_CAROLIEiJ_G0023555	Rif1	75	58.938	Mus_caroli
ENSPCIG00000009185	RIF1	93	67.876	ENSMUSG00000036202	Rif1	89	73.373	Mus_musculus
ENSPCIG00000009185	RIF1	92	68.052	MGP_PahariEiJ_G0025006	Rif1	88	73.591	Mus_pahari
ENSPCIG00000009185	RIF1	99	56.487	MGP_SPRETEiJ_G0024476	Rif1	89	73.294	Mus_spretus
ENSPCIG00000009185	RIF1	99	59.976	ENSMPUG00000000371	RIF1	99	59.602	Mustela_putorius_furo
ENSPCIG00000009185	RIF1	89	56.984	ENSMLUG00000003376	RIF1	100	56.625	Myotis_lucifugus
ENSPCIG00000009185	RIF1	99	59.495	ENSNGAG00000009268	Rif1	99	59.255	Nannospalax_galili
ENSPCIG00000009185	RIF1	64	50.894	ENSNBRG00000014257	rif1	71	49.158	Neolamprologus_brichardi
ENSPCIG00000009185	RIF1	84	93.443	ENSMEUG00000007601	-	88	93.443	Notamacropus_eugenii
ENSPCIG00000009185	RIF1	99	55.256	ENSODEG00000003950	RIF1	99	58.753	Octodon_degus
ENSPCIG00000009185	RIF1	78	77.589	ENSOANG00000006078	-	78	77.589	Ornithorhynchus_anatinus
ENSPCIG00000009185	RIF1	99	58.730	ENSOCUG00000017435	RIF1	99	58.131	Oryctolagus_cuniculus
ENSPCIG00000009185	RIF1	66	48.999	ENSORLG00020001302	rif1	67	49.200	Oryzias_latipes_hni
ENSPCIG00000009185	RIF1	64	48.839	ENSORLG00015000009	rif1	67	48.960	Oryzias_latipes_hsok
ENSPCIG00000009185	RIF1	64	49.239	ENSOMEG00000021513	rif1	69	48.424	Oryzias_melastigma
ENSPCIG00000009185	RIF1	99	62.319	ENSOGAG00000006141	RIF1	95	61.618	Otolemur_garnettii
ENSPCIG00000009185	RIF1	99	59.085	ENSPPAG00000023754	RIF1	99	59.166	Pan_paniscus
ENSPCIG00000009185	RIF1	99	61.649	ENSPPRG00000003618	RIF1	99	58.835	Panthera_pardus
ENSPCIG00000009185	RIF1	99	59.881	ENSPTIG00000020652	RIF1	99	58.696	Panthera_tigris_altaica
ENSPCIG00000009185	RIF1	99	59.166	ENSPTRG00000012534	RIF1	99	59.246	Pan_troglodytes
ENSPCIG00000009185	RIF1	78	50.904	ENSPKIG00000004267	rif1	73	50.904	Paramormyrops_kingsleyae
ENSPCIG00000009185	RIF1	64	47.452	ENSPMGG00000016141	rif1	75	47.003	Periophthalmus_magnuspinnatus
ENSPCIG00000009185	RIF1	73	61.213	ENSPEMG00000000446	Rif1	71	60.420	Peromyscus_maniculatus_bairdii
ENSPCIG00000009185	RIF1	64	52.054	ENSPFOG00000017804	rif1	53	51.825	Poecilia_formosa
ENSPCIG00000009185	RIF1	57	51.781	ENSPFOG00000000554	-	50	51.909	Poecilia_formosa
ENSPCIG00000009185	RIF1	68	49.852	ENSPLAG00000017945	rif1	74	49.778	Poecilia_latipinna
ENSPCIG00000009185	RIF1	62	55.702	ENSPREG00000018052	rif1	66	54.821	Poecilia_reticulata
ENSPCIG00000009185	RIF1	81	76.699	ENSPCAG00000009032	RIF1	81	76.699	Procavia_capensis
ENSPCIG00000009185	RIF1	99	60.072	ENSPCOG00000027888	RIF1	99	60.352	Propithecus_coquereli
ENSPCIG00000009185	RIF1	92	79.192	ENSPVAG00000014276	RIF1	91	79.192	Pteropus_vampyrus
ENSPCIG00000009185	RIF1	69	47.813	ENSPNYG00000012940	rif1	72	47.813	Pundamilia_nyererei
ENSPCIG00000009185	RIF1	66	52.738	ENSPNAG00000016685	rif1	64	52.913	Pygocentrus_nattereri
ENSPCIG00000009185	RIF1	99	55.139	ENSRNOG00000054901	Rif1	75	55.826	Rattus_norvegicus
ENSPCIG00000009185	RIF1	99	58.691	ENSRBIG00000003704	RIF1	99	59.230	Rhinopithecus_bieti
ENSPCIG00000009185	RIF1	99	59.206	ENSRROG00000028206	RIF1	99	59.591	Rhinopithecus_roxellana
ENSPCIG00000009185	RIF1	97	77.419	ENSSBOG00000029530	RIF1	99	77.419	Saimiri_boliviensis_boliviensis
ENSPCIG00000009185	RIF1	100	85.963	ENSSHAG00000018552	RIF1	100	85.963	Sarcophilus_harrisii
ENSPCIG00000009185	RIF1	66	51.242	ENSSFOG00015021539	rif1	72	50.661	Scleropages_formosus
ENSPCIG00000009185	RIF1	65	50.350	ENSSMAG00000011704	rif1	63	49.679	Scophthalmus_maximus
ENSPCIG00000009185	RIF1	65	50.968	ENSSDUG00000015632	rif1	72	48.817	Seriola_dumerili
ENSPCIG00000009185	RIF1	65	50.955	ENSSLDG00000019531	rif1	68	48.441	Seriola_lalandi_dorsalis
ENSPCIG00000009185	RIF1	62	74.830	ENSSARG00000007161	-	56	74.830	Sorex_araneus
ENSPCIG00000009185	RIF1	98	54.998	ENSSPUG00000003062	RIF1	99	54.937	Sphenodon_punctatus
ENSPCIG00000009185	RIF1	53	58.896	ENSSPAG00000018359	rif1	77	58.896	Stegastes_partitus
ENSPCIG00000009185	RIF1	71	49.882	ENSTRUG00000015808	rif1	75	49.882	Takifugu_rubripes
ENSPCIG00000009185	RIF1	73	47.428	ENSTNIG00000011538	rif1	78	47.384	Tetraodon_nigroviridis
ENSPCIG00000009185	RIF1	78	77.707	ENSTBEG00000016082	RIF1	74	77.707	Tupaia_belangeri
ENSPCIG00000009185	RIF1	99	60.112	ENSTTRG00000011190	RIF1	99	59.498	Tursiops_truncatus
ENSPCIG00000009185	RIF1	90	58.112	ENSUAMG00000026385	RIF1	99	57.667	Ursus_americanus
ENSPCIG00000009185	RIF1	99	60.056	ENSUMAG00000000337	RIF1	99	59.648	Ursus_maritimus
ENSPCIG00000009185	RIF1	99	67.308	ENSVPAG00000002162	RIF1	97	66.827	Vicugna_pacos
ENSPCIG00000009185	RIF1	99	59.822	ENSVVUG00000011293	RIF1	99	59.188	Vulpes_vulpes
ENSPCIG00000009185	RIF1	99	45.665	ENSXETG00000004530	rif1	72	47.289	Xenopus_tropicalis