EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000009214 (Gene tree)
Gene ID: 110206082
Gene Symbol: SRRM1
Alias: -
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 36716 bases
Position: chrFUWB01007495.1:17666-54381
Accession: 16638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000011495	PWI	PF01480.17	8.2e-30	1	1
ENSPCIP00000011496	PWI	PF01480.17	8.5e-30	1	1
ENSPCIP00000011494	PWI	PF01480.17	8.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000014300	SRRM1-201	3706	-	ENSPCIP00000011494	913 (aa)	-	-
ENSPCIT00000014301	SRRM1-202	3925	-	ENSPCIP00000011495	860 (aa)	-	-
ENSPCIT00000014302	SRRM1-203	3998	-	ENSPCIP00000011496	860 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000009214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000009214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000009214	SRRM1	60	84.762	ENSCAFG00020020948	SRRM1	53	94.660	Canis_lupus_dingo
ENSPCIG00000009214	SRRM1	60	84.250	ENSTSYG00000006782	SRRM1	57	97.166	Carlito_syrichta
ENSPCIG00000009214	SRRM1	54	95.538	ENSCCAG00000029474	SRRM1	96	95.538	Cebus_capucinus
ENSPCIG00000009214	SRRM1	54	96.407	ENSCHOG00000000027	SRRM1	51	95.858	Choloepus_hoffmanni
ENSPCIG00000009214	SRRM1	50	84.842	ENSDNOG00000049141	SRRM1	56	85.455	Dasypus_novemcinctus
ENSPCIG00000009214	SRRM1	60	84.440	ENSMICG00000006553	SRRM1	54	94.170	Microcebus_murinus
ENSPCIG00000009214	SRRM1	100	97.914	ENSMODG00000013861	SRRM1	96	97.914	Monodelphis_domestica
ENSPCIG00000009214	SRRM1	88	84.204	ENSMEUG00000014704	SRRM1	88	84.204	Notamacropus_eugenii
ENSPCIG00000009214	SRRM1	62	84.544	ENSPTRG00000000349	SRRM1	50	93.722	Pan_troglodytes
ENSPCIG00000009214	SRRM1	60	84.061	ENSPCOG00000021311	SRRM1	52	88.285	Propithecus_coquereli
ENSPCIG00000009214	SRRM1	55	94.223	ENSSBOG00000019884	SRRM1	99	98.718	Saimiri_boliviensis_boliviensis
ENSPCIG00000009214	SRRM1	100	93.909	ENSSHAG00000011061	SRRM1	100	93.909	Sarcophilus_harrisii
ENSPCIG00000009214	SRRM1	59	87.213	ENSSARG00000013718	SRRM1	57	86.640	Sorex_araneus
ENSPCIG00000009214	SRRM1	60	80.519	ENSTBEG00000000100	SRRM1	57	97.166	Tupaia_belangeri