EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000009336 (Gene tree)
Gene ID: 110206567
Gene Symbol: DDX56
Alias: -
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 12922 bases
Position: chrFUWB01000013.1:1932583-1945504
Accession: 110206567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000011675	ResIII	PF04851.15	8.1e-05	1	1
ENSPCIP00000011673	ResIII	PF04851.15	9e-05	1	1
ENSPCIP00000011675	DEAD	PF00270.29	9.4e-38	1	1
ENSPCIP00000011673	DEAD	PF00270.29	1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000014507	DDX56-201	2019	-	ENSPCIP00000011673	552 (aa)	XP_020839713	UPI000A28B85D
ENSPCIT00000014510	DDX56-202	1899	-	ENSPCIP00000011675	512 (aa)	XP_020839714	UPI000A284196

Gene Model

Click here to download ENSPCIG00000009336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000009336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000009336	DDX56	71	30.151	ENSPCIG00000029015	DDX18	56	31.806
ENSPCIG00000009336	DDX56	72	30.326	ENSPCIG00000028856	EIF4A1	92	31.183
ENSPCIG00000009336	DDX56	72	30.273	ENSPCIG00000001050	DDX49	70	31.398
ENSPCIG00000009336	DDX56	70	31.034	ENSPCIG00000001652	DDX17	57	30.769
ENSPCIG00000009336	DDX56	72	30.750	ENSPCIG00000012091	DDX6	74	32.172
ENSPCIG00000009336	DDX56	82	30.263	ENSPCIG00000008052	DDX27	73	30.698
ENSPCIG00000009336	DDX56	72	30.576	ENSPCIG00000013057	EIF4A2	77	45.902
ENSPCIG00000009336	DDX56	80	34.174	ENSPCIG00000029927	DDX47	89	34.174
ENSPCIG00000009336	DDX56	69	31.267	ENSPCIG00000017730	DDX52	54	31.522
ENSPCIG00000009336	DDX56	66	31.414	ENSPCIG00000000219	-	52	32.578
ENSPCIG00000009336	DDX56	69	30.163	ENSPCIG00000003013	DDX10	77	30.163
ENSPCIG00000009336	DDX56	69	30.127	ENSPCIG00000010973	DDX55	65	31.694

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000009336	DDX56	100	84.783	ENSG00000136271	DDX56	100	88.267	Homo_sapiens
ENSPCIG00000009336	DDX56	98	66.007	ENSAPOG00000017113	ddx56	99	66.187	Acanthochromis_polyacanthus
ENSPCIG00000009336	DDX56	99	84.153	ENSAMEG00000017711	DDX56	100	84.153	Ailuropoda_melanoleuca
ENSPCIG00000009336	DDX56	91	60.665	ENSACIG00000013747	ddx56	99	67.760	Amphilophus_citrinellus
ENSPCIG00000009336	DDX56	87	68.712	ENSAOCG00000015447	-	87	68.712	Amphiprion_ocellaris
ENSPCIG00000009336	DDX56	94	66.414	ENSAOCG00000018059	ddx56	97	66.163	Amphiprion_ocellaris
ENSPCIG00000009336	DDX56	98	66.425	ENSAPEG00000007267	ddx56	98	66.243	Amphiprion_percula
ENSPCIG00000009336	DDX56	97	66.304	ENSATEG00000005279	ddx56	98	66.848	Anabas_testudineus
ENSPCIG00000009336	DDX56	99	64.884	ENSACLG00000020113	ddx56	99	65.419	Astatotilapia_calliptera
ENSPCIG00000009336	DDX56	98	62.014	ENSAMXG00000019357	ddx56	99	63.074	Astyanax_mexicanus
ENSPCIG00000009336	DDX56	99	83.971	ENSBTAG00000010602	DDX56	100	84.335	Bos_taurus
ENSPCIG00000009336	DDX56	96	41.219	WBGene00016073	C24H12.4	86	41.219	Caenorhabditis_elegans
ENSPCIG00000009336	DDX56	99	84.699	ENSCJAG00000012233	DDX56	100	84.699	Callithrix_jacchus
ENSPCIG00000009336	DDX56	81	81.960	ENSCAFG00000029295	DDX56	100	81.960	Canis_familiaris
ENSPCIG00000009336	DDX56	99	80.692	ENSCAFG00020019695	DDX56	100	80.692	Canis_lupus_dingo
ENSPCIG00000009336	DDX56	99	84.153	ENSCHIG00000014261	DDX56	100	84.153	Capra_hircus
ENSPCIG00000009336	DDX56	100	83.877	ENSTSYG00000008048	DDX56	100	84.283	Carlito_syrichta
ENSPCIG00000009336	DDX56	86	82.839	ENSCAPG00000006286	DDX56	99	82.839	Cavia_aperea
ENSPCIG00000009336	DDX56	99	83.424	ENSCPOG00000003359	DDX56	100	83.424	Cavia_porcellus
ENSPCIG00000009336	DDX56	99	83.890	ENSCCAG00000025303	DDX56	100	83.890	Cebus_capucinus
ENSPCIG00000009336	DDX56	100	84.964	ENSCATG00000039389	DDX56	100	85.265	Cercocebus_atys
ENSPCIG00000009336	DDX56	99	84.249	ENSCLAG00000007666	DDX56	99	84.249	Chinchilla_lanigera
ENSPCIG00000009336	DDX56	100	85.145	ENSCSAG00000015636	DDX56	100	85.145	Chlorocebus_sabaeus
ENSPCIG00000009336	DDX56	99	72.875	ENSCPBG00000024556	DDX56	99	72.875	Chrysemys_picta_bellii
ENSPCIG00000009336	DDX56	91	57.730	ENSCING00000005185	-	99	58.121	Ciona_intestinalis
ENSPCIG00000009336	DDX56	90	56.832	ENSCSAVG00000011266	-	99	56.832	Ciona_savignyi
ENSPCIG00000009336	DDX56	99	85.246	ENSCANG00000028187	DDX56	100	85.246	Colobus_angolensis_palliatus
ENSPCIG00000009336	DDX56	100	82.428	ENSCGRG00001019019	Ddx56	100	82.428	Cricetulus_griseus_chok1gshd
ENSPCIG00000009336	DDX56	100	82.428	ENSCGRG00000011870	Ddx56	100	82.428	Cricetulus_griseus_crigri
ENSPCIG00000009336	DDX56	98	65.709	ENSCSEG00000008368	ddx56	99	66.607	Cynoglossus_semilaevis
ENSPCIG00000009336	DDX56	98	65.586	ENSCVAG00000006499	ddx56	98	67.153	Cyprinodon_variegatus
ENSPCIG00000009336	DDX56	97	65.441	ENSDARG00000020913	ddx56	97	66.360	Danio_rerio
ENSPCIG00000009336	DDX56	86	83.898	ENSDNOG00000036526	DDX56	99	83.898	Dasypus_novemcinctus
ENSPCIG00000009336	DDX56	91	49.307	FBgn0001565	Hlc	89	49.307	Drosophila_melanogaster
ENSPCIG00000009336	DDX56	82	74.505	ENSETEG00000002969	-	82	74.505	Echinops_telfairi
ENSPCIG00000009336	DDX56	86	57.474	ENSETEG00000019559	-	100	56.632	Echinops_telfairi
ENSPCIG00000009336	DDX56	98	59.425	ENSEBUG00000009986	ddx56	99	60.072	Eptatretus_burgeri
ENSPCIG00000009336	DDX56	99	84.335	ENSEASG00005017795	DDX56	100	84.699	Equus_asinus_asinus
ENSPCIG00000009336	DDX56	99	84.153	ENSECAG00000019897	DDX56	100	84.517	Equus_caballus
ENSPCIG00000009336	DDX56	87	82.636	ENSEEUG00000004849	DDX56	100	82.636	Erinaceus_europaeus
ENSPCIG00000009336	DDX56	98	66.964	ENSELUG00000004150	ddx56	99	67.864	Esox_lucius
ENSPCIG00000009336	DDX56	99	82.967	ENSFCAG00000010261	DDX56	99	82.967	Felis_catus
ENSPCIG00000009336	DDX56	99	83.700	ENSFDAG00000007128	DDX56	99	83.700	Fukomys_damarensis
ENSPCIG00000009336	DDX56	99	64.909	ENSFHEG00000018008	ddx56	98	68.421	Fundulus_heteroclitus
ENSPCIG00000009336	DDX56	98	62.385	ENSGAFG00000006906	ddx56	98	62.385	Gambusia_affinis
ENSPCIG00000009336	DDX56	92	74.803	ENSGAGG00000006789	DDX56	91	74.803	Gopherus_agassizii
ENSPCIG00000009336	DDX56	100	84.783	ENSGGOG00000012031	DDX56	100	85.069	Gorilla_gorilla
ENSPCIG00000009336	DDX56	91	63.281	ENSHBUG00000015246	ddx56	93	63.269	Haplochromis_burtoni
ENSPCIG00000009336	DDX56	99	84.249	ENSHGLG00000017271	DDX56	99	84.249	Heterocephalus_glaber_female
ENSPCIG00000009336	DDX56	99	84.249	ENSHGLG00100015731	DDX56	99	84.249	Heterocephalus_glaber_male
ENSPCIG00000009336	DDX56	97	66.055	ENSHCOG00000001685	ddx56	98	66.055	Hippocampus_comes
ENSPCIG00000009336	DDX56	96	64.663	ENSIPUG00000006602	ddx56	96	64.663	Ictalurus_punctatus
ENSPCIG00000009336	DDX56	99	83.789	ENSSTOG00000000464	DDX56	100	83.789	Ictidomys_tridecemlineatus
ENSPCIG00000009336	DDX56	99	82.202	ENSJJAG00000014269	Ddx56	100	82.202	Jaculus_jaculus
ENSPCIG00000009336	DDX56	98	65.295	ENSKMAG00000016611	ddx56	99	65.295	Kryptolebias_marmoratus
ENSPCIG00000009336	DDX56	98	64.286	ENSLBEG00000026281	ddx56	99	64.643	Labrus_bergylta
ENSPCIG00000009336	DDX56	98	68.488	ENSLACG00000015551	DDX56	98	69.009	Latimeria_chalumnae
ENSPCIG00000009336	DDX56	99	66.431	ENSLOCG00000015185	ddx56	98	67.621	Lepisosteus_oculatus
ENSPCIG00000009336	DDX56	99	84.432	ENSLAFG00000018206	DDX56	99	84.432	Loxodonta_africana
ENSPCIG00000009336	DDX56	100	84.783	ENSMFAG00000041001	DDX56	100	85.069	Macaca_fascicularis
ENSPCIG00000009336	DDX56	100	84.783	ENSMMUG00000002645	DDX56	100	85.069	Macaca_mulatta
ENSPCIG00000009336	DDX56	99	84.882	ENSMNEG00000028492	DDX56	100	84.882	Macaca_nemestrina
ENSPCIG00000009336	DDX56	100	85.145	ENSMLEG00000043591	DDX56	100	85.462	Mandrillus_leucophaeus
ENSPCIG00000009336	DDX56	98	65.405	ENSMAMG00000007776	ddx56	99	66.187	Mastacembelus_armatus
ENSPCIG00000009336	DDX56	99	64.884	ENSMZEG00005009813	ddx56	99	65.419	Maylandia_zebra
ENSPCIG00000009336	DDX56	100	84.570	ENSMICG00000005550	DDX56	100	84.570	Microcebus_murinus
ENSPCIG00000009336	DDX56	100	82.065	ENSMOCG00000016782	Ddx56	100	82.065	Microtus_ochrogaster
ENSPCIG00000009336	DDX56	89	68.651	ENSMMOG00000009654	ddx56	95	69.246	Mola_mola
ENSPCIG00000009336	DDX56	100	87.523	ENSMODG00000016137	DDX56	100	87.703	Monodelphis_domestica
ENSPCIG00000009336	DDX56	68	64.096	ENSMALG00000016910	ddx56	100	64.096	Monopterus_albus
ENSPCIG00000009336	DDX56	100	82.065	MGP_CAROLIEiJ_G0016069	Ddx56	100	82.065	Mus_caroli
ENSPCIG00000009336	DDX56	100	82.609	ENSMUSG00000004393	Ddx56	100	82.609	Mus_musculus
ENSPCIG00000009336	DDX56	100	81.884	MGP_PahariEiJ_G0016822	Ddx56	100	81.884	Mus_pahari
ENSPCIG00000009336	DDX56	100	82.609	MGP_SPRETEiJ_G0016911	Ddx56	100	82.609	Mus_spretus
ENSPCIG00000009336	DDX56	99	83.424	ENSMPUG00000018196	DDX56	88	83.424	Mustela_putorius_furo
ENSPCIG00000009336	DDX56	99	84.432	ENSMLUG00000003509	DDX56	99	84.432	Myotis_lucifugus
ENSPCIG00000009336	DDX56	99	83.424	ENSNGAG00000018785	Ddx56	100	83.424	Nannospalax_galili
ENSPCIG00000009336	DDX56	91	68.632	ENSNBRG00000002656	ddx56	93	68.116	Neolamprologus_brichardi
ENSPCIG00000009336	DDX56	100	84.783	ENSNLEG00000003816	DDX56	100	85.265	Nomascus_leucogenys
ENSPCIG00000009336	DDX56	90	88.508	ENSMEUG00000006788	DDX56	100	88.508	Notamacropus_eugenii
ENSPCIG00000009336	DDX56	99	81.421	ENSOPRG00000000292	-	100	81.421	Ochotona_princeps
ENSPCIG00000009336	DDX56	68	87.733	ENSODEG00000014807	DDX56	100	87.733	Octodon_degus
ENSPCIG00000009336	DDX56	99	66.300	ENSONIG00000011509	ddx56	99	66.300	Oreochromis_niloticus
ENSPCIG00000009336	DDX56	73	72.818	ENSOANG00000015987	-	94	72.823	Ornithorhynchus_anatinus
ENSPCIG00000009336	DDX56	96	72.368	ENSOANG00000006320	-	100	72.556	Ornithorhynchus_anatinus
ENSPCIG00000009336	DDX56	99	81.868	ENSOCUG00000022918	DDX56	99	82.051	Oryctolagus_cuniculus
ENSPCIG00000009336	DDX56	98	67.027	ENSORLG00000001434	ddx56	99	67.027	Oryzias_latipes
ENSPCIG00000009336	DDX56	99	66.964	ENSORLG00020015718	ddx56	96	66.964	Oryzias_latipes_hni
ENSPCIG00000009336	DDX56	98	67.027	ENSORLG00015003004	ddx56	95	67.027	Oryzias_latipes_hsok
ENSPCIG00000009336	DDX56	99	66.370	ENSOMEG00000022072	ddx56	99	67.082	Oryzias_melastigma
ENSPCIG00000009336	DDX56	100	83.152	ENSOGAG00000009981	DDX56	99	83.516	Otolemur_garnettii
ENSPCIG00000009336	DDX56	99	84.699	ENSOARG00000015240	DDX56	100	84.699	Ovis_aries
ENSPCIG00000009336	DDX56	99	68.966	ENSPPAG00000031263	-	100	68.784	Pan_paniscus
ENSPCIG00000009336	DDX56	100	81.105	ENSPPAG00000029147	DDX56	100	81.105	Pan_paniscus
ENSPCIG00000009336	DDX56	99	82.967	ENSPPRG00000014594	DDX56	99	82.967	Panthera_pardus
ENSPCIG00000009336	DDX56	86	81.356	ENSPTIG00000019500	DDX56	92	81.356	Panthera_tigris_altaica
ENSPCIG00000009336	DDX56	93	70.192	ENSPTRG00000052765	-	100	70.000	Pan_troglodytes
ENSPCIG00000009336	DDX56	99	84.882	ENSPTRG00000019147	DDX56	100	84.882	Pan_troglodytes
ENSPCIG00000009336	DDX56	100	84.783	ENSPANG00000002446	DDX56	100	85.069	Papio_anubis
ENSPCIG00000009336	DDX56	99	65.836	ENSPKIG00000018998	ddx56	99	65.836	Paramormyrops_kingsleyae
ENSPCIG00000009336	DDX56	94	68.053	ENSPMGG00000017421	ddx56	98	68.053	Periophthalmus_magnuspinnatus
ENSPCIG00000009336	DDX56	97	66.302	ENSPFOG00000018658	ddx56	98	66.485	Poecilia_formosa
ENSPCIG00000009336	DDX56	98	65.677	ENSPLAG00000019208	ddx56	98	66.667	Poecilia_latipinna
ENSPCIG00000009336	DDX56	97	66.302	ENSPMEG00000001775	ddx56	98	66.667	Poecilia_mexicana
ENSPCIG00000009336	DDX56	97	66.120	ENSPREG00000015142	ddx56	98	66.667	Poecilia_reticulata
ENSPCIG00000009336	DDX56	99	85.246	ENSPPYG00000017591	DDX56	100	85.246	Pongo_abelii
ENSPCIG00000009336	DDX56	96	83.743	ENSPCAG00000011499	DDX56	100	83.743	Procavia_capensis
ENSPCIG00000009336	DDX56	100	84.766	ENSPCOG00000024864	DDX56	100	84.766	Propithecus_coquereli
ENSPCIG00000009336	DDX56	87	85.116	ENSPVAG00000000791	DDX56	87	85.116	Pteropus_vampyrus
ENSPCIG00000009336	DDX56	99	64.706	ENSPNYG00000019212	ddx56	99	65.241	Pundamilia_nyererei
ENSPCIG00000009336	DDX56	98	65.653	ENSPNAG00000025446	ddx56	99	66.547	Pygocentrus_nattereri
ENSPCIG00000009336	DDX56	100	82.065	ENSRNOG00000004670	Ddx56	100	82.065	Rattus_norvegicus
ENSPCIG00000009336	DDX56	100	84.783	ENSRBIG00000030140	DDX56	100	85.069	Rhinopithecus_bieti
ENSPCIG00000009336	DDX56	100	84.601	ENSRROG00000044428	DDX56	100	84.872	Rhinopithecus_roxellana
ENSPCIG00000009336	DDX56	95	46.575	YLR276C	-	97	42.784	Saccharomyces_cerevisiae
ENSPCIG00000009336	DDX56	99	84.517	ENSSBOG00000034339	DDX56	100	84.517	Saimiri_boliviensis_boliviensis
ENSPCIG00000009336	DDX56	86	97.269	ENSSHAG00000016615	DDX56	100	97.269	Sarcophilus_harrisii
ENSPCIG00000009336	DDX56	98	66.667	ENSSFOG00015012795	ddx56	98	66.667	Scleropages_formosus
ENSPCIG00000009336	DDX56	97	66.184	ENSSMAG00000011280	ddx56	98	66.365	Scophthalmus_maximus
ENSPCIG00000009336	DDX56	98	65.530	ENSSDUG00000023597	ddx56	99	66.607	Seriola_dumerili
ENSPCIG00000009336	DDX56	98	65.530	ENSSLDG00000018369	ddx56	99	66.607	Seriola_lalandi_dorsalis
ENSPCIG00000009336	DDX56	75	82.955	ENSSARG00000014363	DDX56	78	82.402	Sorex_araneus
ENSPCIG00000009336	DDX56	99	72.909	ENSSPUG00000000784	DDX56	96	72.909	Sphenodon_punctatus
ENSPCIG00000009336	DDX56	91	69.006	ENSSPAG00000009392	ddx56	96	68.714	Stegastes_partitus
ENSPCIG00000009336	DDX56	99	83.818	ENSSSCG00000016745	DDX56	100	83.818	Sus_scrofa
ENSPCIG00000009336	DDX56	98	65.619	ENSTRUG00000018623	ddx56	99	64.875	Takifugu_rubripes
ENSPCIG00000009336	DDX56	98	63.588	ENSTNIG00000013593	ddx56	99	63.943	Tetraodon_nigroviridis
ENSPCIG00000009336	DDX56	99	83.883	ENSTBEG00000007119	DDX56	99	83.883	Tupaia_belangeri
ENSPCIG00000009336	DDX56	86	83.789	ENSTTRG00000010552	DDX56	100	83.789	Tursiops_truncatus
ENSPCIG00000009336	DDX56	99	83.971	ENSUAMG00000014194	DDX56	100	83.971	Ursus_americanus
ENSPCIG00000009336	DDX56	99	83.971	ENSUMAG00000009666	DDX56	100	83.971	Ursus_maritimus
ENSPCIG00000009336	DDX56	99	82.149	ENSVVUG00000011905	DDX56	100	82.149	Vulpes_vulpes
ENSPCIG00000009336	DDX56	98	68.288	ENSXETG00000019000	ddx56	99	68.051	Xenopus_tropicalis
ENSPCIG00000009336	DDX56	97	65.549	ENSXCOG00000017413	ddx56	98	65.306	Xiphophorus_couchianus
ENSPCIG00000009336	DDX56	97	65.876	ENSXMAG00000018749	ddx56	98	66.058	Xiphophorus_maculatus