EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPCIG00000009392 (Gene tree)
Gene ID: -
Gene Symbol: PABPC1L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 1 like
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 29624 bases
Position: chrFUWB01000013.1:3415591-3445214
Accession: 110206591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000011744	PABP	PF00658.18	4.8e-27	1	1
ENSPCIP00000011744	RRM_1	PF00076.22	2.7e-87	1	4
ENSPCIP00000011744	RRM_1	PF00076.22	2.7e-87	2	4
ENSPCIP00000011744	RRM_1	PF00076.22	2.7e-87	3	4
ENSPCIP00000011744	RRM_1	PF00076.22	2.7e-87	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000014605	PABPC1L-201	1856	-	ENSPCIP00000011744	607 (aa)	XP_020839762	UPI000A27FE6B

Gene Model

Click here to download ENSPCIG00000009392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000009392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000009392	PABPC1L	50	36.047	ENSPCIG00000022947	CELF1	63	36.047
ENSPCIG00000009392	PABPC1L	98	58.494	ENSPCIG00000016154	-	94	58.494
ENSPCIG00000009392	PABPC1L	99	59.319	ENSPCIG00000006048	-	97	59.319
ENSPCIG00000009392	PABPC1L	64	39.744	ENSPCIG00000024983	ELAVL1	100	39.744
ENSPCIG00000009392	PABPC1L	98	60.289	ENSPCIG00000016995	-	54	60.289
ENSPCIG00000009392	PABPC1L	61	30.247	ENSPCIG00000026989	HNRNPA0	50	30.968
ENSPCIG00000009392	PABPC1L	75	36.145	ENSPCIG00000011696	ELAVL2	89	36.145
ENSPCIG00000009392	PABPC1L	98	66.134	ENSPCIG00000020674	PABPC4	97	66.134
ENSPCIG00000009392	PABPC1L	98	76.010	ENSPCIG00000000267	-	98	76.010