EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000009471 (Gene tree)
Gene ID: 110205699
Gene Symbol: PRDM4
Alias: -
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 27064 bases
Position: chrFUWB01000405.1:916512-943575
Accession: 9348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000011851	zf-C2H2	PF00096.26	5.4e-20	1	3
ENSPCIP00000011851	zf-C2H2	PF00096.26	5.4e-20	2	3
ENSPCIP00000011851	zf-C2H2	PF00096.26	5.4e-20	3	3
ENSPCIP00000011849	zf-C2H2	PF00096.26	1.2e-19	1	3
ENSPCIP00000011849	zf-C2H2	PF00096.26	1.2e-19	2	3
ENSPCIP00000011849	zf-C2H2	PF00096.26	1.2e-19	3	3
ENSPCIP00000011851	zf-met	PF12874.7	0.00036	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000014739	PRDM4-201	4381	-	ENSPCIP00000011849	799 (aa)	-	-
ENSPCIT00000014741	PRDM4-202	3121	-	ENSPCIP00000011851	729 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000009471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000009471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000009471	PRDM4	100	89.055	ENSG00000110851	PRDM4	100	94.667	Homo_sapiens
ENSPCIG00000009471	PRDM4	99	89.152	ENSAMEG00000016174	PRDM4	99	89.152	Ailuropoda_melanoleuca
ENSPCIG00000009471	PRDM4	99	85.393	ENSAPLG00000009846	PRDM4	99	85.144	Anas_platyrhynchos
ENSPCIG00000009471	PRDM4	100	88.930	ENSANAG00000024800	PRDM4	100	88.930	Aotus_nancymaae
ENSPCIG00000009471	PRDM4	100	89.428	ENSBTAG00000012999	PRDM4	100	89.428	Bos_taurus
ENSPCIG00000009471	PRDM4	100	88.557	ENSCJAG00000015261	PRDM4	100	88.557	Callithrix_jacchus
ENSPCIG00000009471	PRDM4	100	89.303	ENSCAFG00000001788	PRDM4	100	89.303	Canis_familiaris
ENSPCIG00000009471	PRDM4	100	89.303	ENSCAFG00020004916	PRDM4	100	89.303	Canis_lupus_dingo
ENSPCIG00000009471	PRDM4	100	89.303	ENSCHIG00000019409	PRDM4	100	89.303	Capra_hircus
ENSPCIG00000009471	PRDM4	100	88.930	ENSTSYG00000009248	PRDM4	100	88.930	Carlito_syrichta
ENSPCIG00000009471	PRDM4	99	86.534	ENSCAPG00000013937	PRDM4	99	86.783	Cavia_aperea
ENSPCIG00000009471	PRDM4	99	86.015	ENSCPOG00000022385	PRDM4	100	86.262	Cavia_porcellus
ENSPCIG00000009471	PRDM4	100	89.055	ENSCCAG00000036033	PRDM4	100	89.055	Cebus_capucinus
ENSPCIG00000009471	PRDM4	100	88.930	ENSCATG00000044797	PRDM4	100	88.930	Cercocebus_atys
ENSPCIG00000009471	PRDM4	99	87.237	ENSCLAG00000007545	PRDM4	100	87.732	Chinchilla_lanigera
ENSPCIG00000009471	PRDM4	100	88.930	ENSCSAG00000002896	PRDM4	100	88.930	Chlorocebus_sabaeus
ENSPCIG00000009471	PRDM4	72	93.636	ENSCHOG00000001744	PRDM4	83	93.636	Choloepus_hoffmanni
ENSPCIG00000009471	PRDM4	99	85.500	ENSCPBG00000023187	PRDM4	100	85.500	Chrysemys_picta_bellii
ENSPCIG00000009471	PRDM4	100	89.179	ENSCANG00000021804	PRDM4	100	89.179	Colobus_angolensis_palliatus
ENSPCIG00000009471	PRDM4	99	85.378	ENSCGRG00001015102	-	100	85.378	Cricetulus_griseus_chok1gshd
ENSPCIG00000009471	PRDM4	99	84.709	ENSCGRG00000004044	-	100	85.219	Cricetulus_griseus_crigri
ENSPCIG00000009471	PRDM4	100	88.184	ENSDNOG00000032478	PRDM4	100	89.843	Dasypus_novemcinctus
ENSPCIG00000009471	PRDM4	99	75.862	ENSDORG00000015081	-	100	74.375	Dipodomys_ordii
ENSPCIG00000009471	PRDM4	93	46.143	ENSEBUG00000003775	prdm4	99	45.833	Eptatretus_burgeri
ENSPCIG00000009471	PRDM4	100	89.925	ENSECAG00000015423	PRDM4	100	89.925	Equus_caballus
ENSPCIG00000009471	PRDM4	98	85.042	ENSEEUG00000006569	PRDM4	99	85.503	Erinaceus_europaeus
ENSPCIG00000009471	PRDM4	98	60.162	ENSELUG00000015265	prdm4	94	62.176	Esox_lucius
ENSPCIG00000009471	PRDM4	100	89.179	ENSFCAG00000022478	PRDM4	100	89.179	Felis_catus
ENSPCIG00000009471	PRDM4	98	85.714	ENSFALG00000013342	PRDM4	99	85.588	Ficedula_albicollis
ENSPCIG00000009471	PRDM4	100	84.864	ENSGALG00000012619	PRDM4	100	84.615	Gallus_gallus
ENSPCIG00000009471	PRDM4	99	85.268	ENSGAGG00000002763	PRDM4	95	85.268	Gopherus_agassizii
ENSPCIG00000009471	PRDM4	99	89.166	ENSGGOG00000001244	PRDM4	99	89.166	Gorilla_gorilla
ENSPCIG00000009471	PRDM4	99	87.750	ENSHGLG00000004590	PRDM4	98	87.750	Heterocephalus_glaber_female
ENSPCIG00000009471	PRDM4	99	86.634	ENSHGLG00100007464	PRDM4	100	86.634	Heterocephalus_glaber_male
ENSPCIG00000009471	PRDM4	94	60.728	ENSIPUG00000024162	prdm4	99	58.765	Ictalurus_punctatus
ENSPCIG00000009471	PRDM4	100	88.060	ENSSTOG00000016168	PRDM4	100	88.060	Ictidomys_tridecemlineatus
ENSPCIG00000009471	PRDM4	81	84.718	ENSJJAG00000022448	-	95	84.718	Jaculus_jaculus
ENSPCIG00000009471	PRDM4	94	75.753	ENSLACG00000007452	PRDM4	94	75.754	Latimeria_chalumnae
ENSPCIG00000009471	PRDM4	78	41.558	ENSLOCG00000017092	prdm4	93	54.113	Lepisosteus_oculatus
ENSPCIG00000009471	PRDM4	97	89.721	ENSLAFG00000001483	PRDM4	99	89.721	Loxodonta_africana
ENSPCIG00000009471	PRDM4	100	89.055	ENSMFAG00000041862	PRDM4	100	89.055	Macaca_fascicularis
ENSPCIG00000009471	PRDM4	100	89.055	ENSMMUG00000015550	PRDM4	100	89.055	Macaca_mulatta
ENSPCIG00000009471	PRDM4	100	88.806	ENSMNEG00000032319	PRDM4	100	88.806	Macaca_nemestrina
ENSPCIG00000009471	PRDM4	100	88.930	ENSMLEG00000039607	PRDM4	100	88.930	Mandrillus_leucophaeus
ENSPCIG00000009471	PRDM4	99	77.009	ENSMGAG00000012815	PRDM4	100	76.761	Meleagris_gallopavo
ENSPCIG00000009471	PRDM4	100	87.562	ENSMICG00000007807	PRDM4	100	87.562	Microcebus_murinus
ENSPCIG00000009471	PRDM4	100	86.567	ENSMOCG00000000753	Prdm4	99	86.567	Microtus_ochrogaster
ENSPCIG00000009471	PRDM4	99	86.500	ENSMUSG00000035529	Prdm4	100	86.500	Mus_musculus
ENSPCIG00000009471	PRDM4	99	86.000	MGP_PahariEiJ_G0031398	Prdm4	100	86.000	Mus_pahari
ENSPCIG00000009471	PRDM4	99	87.125	MGP_SPRETEiJ_G0016505	Prdm4	100	87.125	Mus_spretus
ENSPCIG00000009471	PRDM4	95	87.322	ENSMPUG00000012238	PRDM4	99	83.375	Mustela_putorius_furo
ENSPCIG00000009471	PRDM4	99	88.764	ENSMLUG00000000767	PRDM4	99	88.764	Myotis_lucifugus
ENSPCIG00000009471	PRDM4	99	88.000	ENSNGAG00000018627	Prdm4	100	88.000	Nannospalax_galili
ENSPCIG00000009471	PRDM4	100	88.930	ENSNLEG00000006748	PRDM4	100	88.930	Nomascus_leucogenys
ENSPCIG00000009471	PRDM4	89	95.550	ENSMEUG00000004495	PRDM4	89	95.550	Notamacropus_eugenii
ENSPCIG00000009471	PRDM4	88	87.574	ENSOPRG00000010192	PRDM4	89	87.574	Ochotona_princeps
ENSPCIG00000009471	PRDM4	99	87.049	ENSODEG00000014750	PRDM4	99	87.422	Octodon_degus
ENSPCIG00000009471	PRDM4	100	88.930	ENSOANG00000005526	PRDM4	100	88.930	Ornithorhynchus_anatinus
ENSPCIG00000009471	PRDM4	93	90.000	ENSOCUG00000012859	PRDM4	96	90.000	Oryctolagus_cuniculus
ENSPCIG00000009471	PRDM4	99	89.250	ENSOGAG00000011945	PRDM4	100	89.250	Otolemur_garnettii
ENSPCIG00000009471	PRDM4	100	89.552	ENSOARG00000017955	PRDM4	100	89.552	Ovis_aries
ENSPCIG00000009471	PRDM4	100	89.179	ENSPPAG00000038438	PRDM4	100	89.179	Pan_paniscus
ENSPCIG00000009471	PRDM4	100	89.179	ENSPPRG00000004144	PRDM4	100	89.179	Panthera_pardus
ENSPCIG00000009471	PRDM4	100	89.179	ENSPTIG00000005847	PRDM4	100	89.179	Panthera_tigris_altaica
ENSPCIG00000009471	PRDM4	100	89.055	ENSPTRG00000005400	PRDM4	100	89.055	Pan_troglodytes
ENSPCIG00000009471	PRDM4	100	89.055	ENSPANG00000022084	PRDM4	100	89.055	Papio_anubis
ENSPCIG00000009471	PRDM4	99	59.929	ENSPKIG00000000875	prdm4	99	60.523	Paramormyrops_kingsleyae
ENSPCIG00000009471	PRDM4	88	86.188	ENSPSIG00000012066	PRDM4	100	86.188	Pelodiscus_sinensis
ENSPCIG00000009471	PRDM4	99	87.500	ENSPEMG00000014598	Prdm4	100	87.500	Peromyscus_maniculatus_bairdii
ENSPCIG00000009471	PRDM4	100	89.055	ENSPPYG00000004913	PRDM4	100	89.055	Pongo_abelii
ENSPCIG00000009471	PRDM4	84	91.667	ENSPCAG00000009987	PRDM4	83	91.667	Procavia_capensis
ENSPCIG00000009471	PRDM4	100	87.313	ENSPCOG00000021060	PRDM4	100	87.313	Propithecus_coquereli
ENSPCIG00000009471	PRDM4	100	88.323	ENSPVAG00000001596	PRDM4	100	88.323	Pteropus_vampyrus
ENSPCIG00000009471	PRDM4	99	86.642	ENSRNOG00000004962	Prdm4	100	87.016	Rattus_norvegicus
ENSPCIG00000009471	PRDM4	100	89.179	ENSRBIG00000035488	PRDM4	100	89.179	Rhinopithecus_bieti
ENSPCIG00000009471	PRDM4	100	89.055	ENSRROG00000012779	PRDM4	100	89.055	Rhinopithecus_roxellana
ENSPCIG00000009471	PRDM4	100	89.055	ENSSBOG00000000403	PRDM4	100	89.055	Saimiri_boliviensis_boliviensis
ENSPCIG00000009471	PRDM4	99	64.054	ENSSFOG00015023358	prdm4	98	64.684	Scleropages_formosus
ENSPCIG00000009471	PRDM4	100	88.682	ENSSSCG00000000160	PRDM4	100	88.682	Sus_scrofa
ENSPCIG00000009471	PRDM4	98	85.985	ENSTGUG00000010962	-	99	85.268	Taeniopygia_guttata
ENSPCIG00000009471	PRDM4	88	82.453	ENSTBEG00000001732	PRDM4	84	82.453	Tupaia_belangeri
ENSPCIG00000009471	PRDM4	100	89.552	ENSTTRG00000011056	PRDM4	100	89.552	Tursiops_truncatus
ENSPCIG00000009471	PRDM4	100	89.428	ENSUAMG00000022796	PRDM4	100	89.428	Ursus_americanus
ENSPCIG00000009471	PRDM4	100	89.428	ENSUMAG00000017231	PRDM4	100	89.428	Ursus_maritimus
ENSPCIG00000009471	PRDM4	99	89.000	ENSVPAG00000002215	PRDM4	100	89.000	Vicugna_pacos
ENSPCIG00000009471	PRDM4	100	89.303	ENSVVUG00000023397	PRDM4	100	89.303	Vulpes_vulpes