EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000009504 (Gene tree)
Gene ID: 110197405
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 35296 bases
Position: chrFUWB01001041.1:726740-762035
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000011902	RRM_5	PF13893.6	1.2e-06	1	1
ENSPCIP00000011898	RRM_5	PF13893.6	1.3e-06	1	1
ENSPCIP00000011901	RRM_5	PF13893.6	1.4e-06	1	1
ENSPCIP00000011902	RRM_1	PF00076.22	2.6e-13	1	1
ENSPCIP00000011898	RRM_1	PF00076.22	2.7e-13	1	1
ENSPCIP00000011901	RRM_1	PF00076.22	3.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000014792	-	2455	-	ENSPCIP00000011898	496 (aa)	-	-
ENSPCIT00000014796	-	1937	-	ENSPCIP00000011902	486 (aa)	-	-
ENSPCIT00000014795	-	1900	-	ENSPCIP00000011901	536 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000009504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000009504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000009504	-	100	71.326	ENSPCIG00000009518	-	97	70.251

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000009504	-	99	82.766	ENSG00000160633	SAFB	88	84.559	Homo_sapiens
ENSPCIG00000009504	-	100	78.782	ENSAMEG00000012254	SAFB	59	79.520	Ailuropoda_melanoleuca
ENSPCIG00000009504	-	95	50.749	ENSACIG00000006247	safb	59	50.962	Amphilophus_citrinellus
ENSPCIG00000009504	-	99	47.140	ENSATEG00000004998	safb	57	50.277	Anabas_testudineus
ENSPCIG00000009504	-	99	68.787	ENSAPLG00000005780	-	63	67.890	Anas_platyrhynchos
ENSPCIG00000009504	-	99	68.047	ENSAPLG00000006355	-	61	67.913	Anas_platyrhynchos
ENSPCIG00000009504	-	99	82.164	ENSANAG00000028821	SAFB	63	81.031	Aotus_nancymaae
ENSPCIG00000009504	-	95	49.585	ENSACLG00000001926	safb	60	49.813	Astatotilapia_calliptera
ENSPCIG00000009504	-	96	52.953	ENSAMXG00000018154	safb	57	49.620	Astyanax_mexicanus
ENSPCIG00000009504	-	99	77.355	ENSBTAG00000007875	SAFB	58	75.461	Bos_taurus
ENSPCIG00000009504	-	99	82.400	ENSCJAG00000017081	SAFB	100	80.847	Callithrix_jacchus
ENSPCIG00000009504	-	100	80.407	ENSCAFG00000018803	SAFB	51	81.146	Canis_familiaris
ENSPCIG00000009504	-	100	80.407	ENSCAFG00020018943	SAFB	58	81.146	Canis_lupus_dingo
ENSPCIG00000009504	-	99	77.355	ENSCHIG00000007262	SAFB	58	75.461	Capra_hircus
ENSPCIG00000009504	-	99	68.813	ENSTSYG00000001851	-	100	64.727	Carlito_syrichta
ENSPCIG00000009504	-	100	77.819	ENSCPOG00000026322	SAFB	57	77.819	Cavia_porcellus
ENSPCIG00000009504	-	99	82.400	ENSCCAG00000020193	SAFB	63	80.847	Cebus_capucinus
ENSPCIG00000009504	-	99	82.565	ENSCATG00000029994	SAFB	63	81.400	Cercocebus_atys
ENSPCIG00000009504	-	100	75.646	ENSCLAG00000007734	SAFB	57	77.122	Chinchilla_lanigera
ENSPCIG00000009504	-	99	82.565	ENSCSAG00000009949	SAFB	58	81.550	Chlorocebus_sabaeus
ENSPCIG00000009504	-	88	76.728	ENSCHOG00000003208	SAFB	56	76.941	Choloepus_hoffmanni
ENSPCIG00000009504	-	99	69.800	ENSCPBG00000010928	-	64	67.712	Chrysemys_picta_bellii
ENSPCIG00000009504	-	99	68.155	ENSCPBG00000010936	-	63	63.914	Chrysemys_picta_bellii
ENSPCIG00000009504	-	99	77.555	ENSCANG00000019754	-	58	76.384	Colobus_angolensis_palliatus
ENSPCIG00000009504	-	82	83.058	ENSCANG00000004774	-	58	83.058	Colobus_angolensis_palliatus
ENSPCIG00000009504	-	100	78.782	ENSCGRG00001002254	Safb	58	78.967	Cricetulus_griseus_chok1gshd
ENSPCIG00000009504	-	99	79.359	ENSCGRG00000011529	Safb	59	78.967	Cricetulus_griseus_crigri
ENSPCIG00000009504	-	99	79.960	ENSDNOG00000015746	SAFB	51	79.336	Dasypus_novemcinctus
ENSPCIG00000009504	-	99	79.042	ENSEASG00005023019	SAFB	58	79.779	Equus_asinus_asinus
ENSPCIG00000009504	-	99	81.526	ENSECAG00000018659	SAFB	52	80.776	Equus_caballus
ENSPCIG00000009504	-	99	47.368	ENSELUG00000022327	safb	56	50.101	Esox_lucius
ENSPCIG00000009504	-	100	80.443	ENSFCAG00000011835	SAFB	58	81.181	Felis_catus
ENSPCIG00000009504	-	99	71.257	ENSFALG00000013882	-	54	68.508	Ficedula_albicollis
ENSPCIG00000009504	-	97	63.690	ENSFALG00000013881	-	63	63.225	Ficedula_albicollis
ENSPCIG00000009504	-	85	74.419	ENSFDAG00000020306	SAFB	50	79.668	Fukomys_damarensis
ENSPCIG00000009504	-	91	53.728	ENSGMOG00000014280	safb	60	47.628	Gadus_morhua
ENSPCIG00000009504	-	99	71.457	ENSGALG00000013365	-	59	67.587	Gallus_gallus
ENSPCIG00000009504	-	99	66.409	ENSGALG00000001948	-	58	66.071	Gallus_gallus
ENSPCIG00000009504	-	99	45.850	ENSGAFG00000016162	safb	52	45.850	Gambusia_affinis
ENSPCIG00000009504	-	95	52.772	ENSGACG00000011385	safb	57	46.703	Gasterosteus_aculeatus
ENSPCIG00000009504	-	96	68.220	ENSGAGG00000017702	-	80	63.011	Gopherus_agassizii
ENSPCIG00000009504	-	99	68.544	ENSGAGG00000008424	-	56	66.796	Gopherus_agassizii
ENSPCIG00000009504	-	99	82.565	ENSGGOG00000015109	SAFB	63	81.400	Gorilla_gorilla
ENSPCIG00000009504	-	100	79.444	ENSHGLG00000015883	SAFB	57	79.444	Heterocephalus_glaber_female
ENSPCIG00000009504	-	97	45.984	ENSHCOG00000001705	safb	61	45.455	Hippocampus_comes
ENSPCIG00000009504	-	93	52.421	ENSIPUG00000024869	safb2	58	52.206	Ictalurus_punctatus
ENSPCIG00000009504	-	99	80.522	ENSSTOG00000002783	SAFB	62	80.037	Ictidomys_tridecemlineatus
ENSPCIG00000009504	-	99	79.760	ENSJJAG00000009021	Safb	60	78.755	Jaculus_jaculus
ENSPCIG00000009504	-	91	53.275	ENSKMAG00000022308	safb	59	48.816	Kryptolebias_marmoratus
ENSPCIG00000009504	-	96	51.085	ENSLOCG00000003613	safb	58	50.926	Lepisosteus_oculatus
ENSPCIG00000009504	-	99	79.125	ENSLAFG00000003840	SAFB	58	79.368	Loxodonta_africana
ENSPCIG00000009504	-	99	82.400	ENSMFAG00000003885	SAFB	63	81.400	Macaca_fascicularis
ENSPCIG00000009504	-	99	82.565	ENSMMUG00000017970	SAFB	63	81.400	Macaca_mulatta
ENSPCIG00000009504	-	100	78.085	ENSMNEG00000035637	SAFB	64	78.269	Macaca_nemestrina
ENSPCIG00000009504	-	96	78.011	ENSMLEG00000038637	SAFB	57	78.203	Mandrillus_leucophaeus
ENSPCIG00000009504	-	98	49.505	ENSMAMG00000003357	safb	53	49.081	Mastacembelus_armatus
ENSPCIG00000009504	-	95	49.585	ENSMZEG00005009120	safb	60	49.813	Maylandia_zebra
ENSPCIG00000009504	-	99	69.860	ENSMGAG00000001101	-	61	65.619	Meleagris_gallopavo
ENSPCIG00000009504	-	89	67.265	ENSMGAG00000001051	-	54	69.507	Meleagris_gallopavo
ENSPCIG00000009504	-	89	78.971	ENSMAUG00000005013	Safb	100	78.571	Mesocricetus_auratus
ENSPCIG00000009504	-	81	71.642	ENSMICG00000046795	-	51	72.139	Microcebus_murinus
ENSPCIG00000009504	-	99	79.600	ENSMICG00000008739	-	63	79.558	Microcebus_murinus
ENSPCIG00000009504	-	99	79.359	ENSMOCG00000014040	Safb	57	78.967	Microtus_ochrogaster
ENSPCIG00000009504	-	100	94.918	ENSMODG00000001236	SAFB	59	94.918	Monodelphis_domestica
ENSPCIG00000009504	-	99	47.656	ENSMALG00000020330	safb	57	47.898	Monopterus_albus
ENSPCIG00000009504	-	100	78.967	MGP_CAROLIEiJ_G0021780	Safb	57	78.413	Mus_caroli
ENSPCIG00000009504	-	100	78.967	ENSMUSG00000071054	Safb	57	78.598	Mus_musculus
ENSPCIG00000009504	-	100	78.782	MGP_PahariEiJ_G0020769	Safb	57	78.229	Mus_pahari
ENSPCIG00000009504	-	100	80.258	ENSMPUG00000006123	SAFB	55	80.627	Mustela_putorius_furo
ENSPCIG00000009504	-	100	79.336	ENSMLUG00000001081	SAFB	59	79.558	Myotis_lucifugus
ENSPCIG00000009504	-	99	77.576	ENSNGAG00000019882	Safb	57	77.138	Nannospalax_galili
ENSPCIG00000009504	-	99	82.365	ENSNLEG00000013551	SAFB	61	82.306	Nomascus_leucogenys
ENSPCIG00000009504	-	99	76.104	ENSOPRG00000011561	-	61	76.908	Ochotona_princeps
ENSPCIG00000009504	-	100	79.482	ENSODEG00000014838	SAFB	57	79.482	Octodon_degus
ENSPCIG00000009504	-	95	50.104	ENSONIG00000002318	safb	57	49.906	Oreochromis_niloticus
ENSPCIG00000009504	-	95	47.401	ENSOMEG00000009066	safb	57	47.514	Oryzias_melastigma
ENSPCIG00000009504	-	100	75.046	ENSOGAG00000027769	SAFB	58	78.388	Otolemur_garnettii
ENSPCIG00000009504	-	99	71.543	ENSOARG00000007662	-	58	69.557	Ovis_aries
ENSPCIG00000009504	-	81	69.424	ENSOARG00000007856	-	54	69.424	Ovis_aries
ENSPCIG00000009504	-	99	82.400	ENSPPAG00000035129	SAFB	63	81.400	Pan_paniscus
ENSPCIG00000009504	-	100	80.443	ENSPPRG00000017197	SAFB	58	81.181	Panthera_pardus
ENSPCIG00000009504	-	99	82.400	ENSPTRG00000010335	SAFB	63	81.400	Pan_troglodytes
ENSPCIG00000009504	-	99	82.400	ENSPANG00000007770	SAFB	63	81.400	Papio_anubis
ENSPCIG00000009504	-	96	48.031	ENSPKIG00000009902	safb	57	50.471	Paramormyrops_kingsleyae
ENSPCIG00000009504	-	99	65.774	ENSPSIG00000009367	-	60	62.478	Pelodiscus_sinensis
ENSPCIG00000009504	-	99	68.738	ENSPSIG00000011679	-	63	65.171	Pelodiscus_sinensis
ENSPCIG00000009504	-	99	79.559	ENSPEMG00000020428	Safb	57	79.151	Peromyscus_maniculatus_bairdii
ENSPCIG00000009504	-	99	82.329	ENSPPYG00000009428	SAFB	58	81.331	Pongo_abelii
ENSPCIG00000009504	-	100	72.878	ENSPCAG00000006475	SAFB	58	74.354	Procavia_capensis
ENSPCIG00000009504	-	100	75.458	ENSPCOG00000014090	SAFB	63	75.092	Propithecus_coquereli
ENSPCIG00000009504	-	100	73.801	ENSPVAG00000004913	SAFB	58	74.908	Pteropus_vampyrus
ENSPCIG00000009504	-	93	49.895	ENSPNAG00000021838	safb	57	49.538	Pygocentrus_nattereri
ENSPCIG00000009504	-	100	78.269	ENSRNOG00000050543	Safb	62	78.409	Rattus_norvegicus
ENSPCIG00000009504	-	100	76.568	ENSRBIG00000042509	SAFB	67	76.753	Rhinopithecus_bieti
ENSPCIG00000009504	-	99	82.200	ENSRROG00000029278	SAFB	63	81.215	Rhinopithecus_roxellana
ENSPCIG00000009504	-	99	82.565	ENSSBOG00000026291	SAFB	63	80.847	Saimiri_boliviensis_boliviensis
ENSPCIG00000009504	-	99	48.148	ENSSFOG00015008156	safb	57	50.640	Scleropages_formosus
ENSPCIG00000009504	-	98	48.214	ENSSDUG00000009652	safb	61	48.619	Seriola_dumerili
ENSPCIG00000009504	-	98	52.071	ENSSLDG00000001670	safb	58	50.275	Seriola_lalandi_dorsalis
ENSPCIG00000009504	-	100	74.444	ENSSARG00000010475	SAFB	62	74.954	Sorex_araneus
ENSPCIG00000009504	-	95	54.601	ENSSPAG00000015682	safb	64	49.815	Stegastes_partitus
ENSPCIG00000009504	-	100	80.961	ENSSSCG00000013522	SAFB	54	80.776	Sus_scrofa
ENSPCIG00000009504	-	96	66.393	ENSTGUG00000000489	-	56	65.914	Taeniopygia_guttata
ENSPCIG00000009504	-	99	70.259	ENSTGUG00000000502	-	57	69.307	Taeniopygia_guttata
ENSPCIG00000009504	-	93	50.524	ENSTRUG00000003567	safb	57	49.165	Takifugu_rubripes
ENSPCIG00000009504	-	88	55.430	ENSTNIG00000015470	safb	52	49.130	Tetraodon_nigroviridis
ENSPCIG00000009504	-	100	77.675	ENSTTRG00000013588	SAFB	58	77.491	Tursiops_truncatus
ENSPCIG00000009504	-	100	80.627	ENSUAMG00000024543	SAFB	69	80.812	Ursus_americanus
ENSPCIG00000009504	-	72	76.800	ENSUMAG00000009734	SAFB	51	81.743	Ursus_maritimus
ENSPCIG00000009504	-	99	70.161	ENSVPAG00000012043	SAFB	62	70.321	Vicugna_pacos
ENSPCIG00000009504	-	100	80.258	ENSVVUG00000013720	SAFB	51	80.996	Vulpes_vulpes