EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000009518 (Gene tree)
Gene ID: 110197406
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 25796 bases
Position: chrFUWB01001041.1:787957-813752
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000014355	RRM_5	PF13893.6	2.8e-06	1	1
ENSPCIP00000013870	RRM_5	PF13893.6	3.2e-06	1	1
ENSPCIP00000013994	RRM_5	PF13893.6	3.6e-06	1	1
ENSPCIP00000014211	RRM_5	PF13893.6	5.4e-06	1	1
ENSPCIP00000014355	RRM_1	PF00076.22	3.7e-14	1	1
ENSPCIP00000013870	RRM_1	PF00076.22	4.2e-14	1	1
ENSPCIP00000014211	RRM_1	PF00076.22	4.3e-14	1	1
ENSPCIP00000014043	RRM_1	PF00076.22	4.6e-14	1	1
ENSPCIP00000013994	RRM_1	PF00076.22	4.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000017537	-	1668	-	ENSPCIP00000014211	555 (aa)	-	-
ENSPCIT00000017707	-	1476	-	ENSPCIP00000014355	491 (aa)	-	-
ENSPCIT00000017139	-	2289	-	ENSPCIP00000013870	534 (aa)	-	-
ENSPCIT00000017342	-	1761	-	ENSPCIP00000014043	586 (aa)	-	-
ENSPCIT00000017287	-	1957	-	ENSPCIP00000013994	577 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000009518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000009518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000009518	-	97	70.251	ENSPCIG00000009504	-	100	71.326

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000009518	-	99	78.637	ENSG00000130254	SAFB2	64	75.000	Homo_sapiens
ENSPCIG00000009518	-	99	76.427	ENSAMEG00000012146	SAFB2	64	73.934	Ailuropoda_melanoleuca
ENSPCIG00000009518	-	99	79.006	ENSANAG00000031936	SAFB2	65	75.163	Aotus_nancymaae
ENSPCIG00000009518	-	99	75.646	ENSBTAG00000001790	SAFB2	64	72.488	Bos_taurus
ENSPCIG00000009518	-	99	78.782	ENSCAFG00000018814	SAFB2	64	75.777	Canis_familiaris
ENSPCIG00000009518	-	99	78.637	ENSCAFG00020018939	SAFB2	64	75.654	Canis_lupus_dingo
ENSPCIG00000009518	-	99	75.830	ENSCHIG00000024547	SAFB2	64	73.300	Capra_hircus
ENSPCIG00000009518	-	99	57.404	ENSCAPG00000011771	SAFB2	66	58.101	Cavia_aperea
ENSPCIG00000009518	-	99	76.015	ENSCPOG00000011394	SAFB2	64	73.191	Cavia_porcellus
ENSPCIG00000009518	-	99	78.637	ENSCCAG00000017348	SAFB2	63	77.027	Cebus_capucinus
ENSPCIG00000009518	-	99	76.937	ENSCATG00000039497	SAFB2	64	73.650	Cercocebus_atys
ENSPCIG00000009518	-	99	78.637	ENSCSAG00000009959	SAFB2	64	75.163	Chlorocebus_sabaeus
ENSPCIG00000009518	-	87	64.760	ENSCHOG00000010684	SAFB2	64	64.254	Choloepus_hoffmanni
ENSPCIG00000009518	-	99	74.770	ENSCANG00000024675	SAFB2	64	71.220	Colobus_angolensis_palliatus
ENSPCIG00000009518	-	99	69.725	ENSCGRG00001015833	Safb2	60	68.074	Cricetulus_griseus_chok1gshd
ENSPCIG00000009518	-	99	69.725	ENSCGRG00000011131	Safb2	60	68.074	Cricetulus_griseus_crigri
ENSPCIG00000009518	-	99	71.964	ENSDORG00000016199	Safb2	65	71.453	Dipodomys_ordii
ENSPCIG00000009518	-	99	79.362	ENSEASG00005022952	SAFB2	66	75.372	Equus_asinus_asinus
ENSPCIG00000009518	-	99	78.782	ENSECAG00000018978	SAFB2	64	74.384	Equus_caballus
ENSPCIG00000009518	-	99	77.860	ENSFCAG00000011834	SAFB2	64	75.286	Felis_catus
ENSPCIG00000009518	-	88	78.889	ENSFDAG00000020009	SAFB2	55	79.377	Fukomys_damarensis
ENSPCIG00000009518	-	99	72.993	ENSGGOG00000015093	SAFB2	62	73.790	Gorilla_gorilla
ENSPCIG00000009518	-	99	79.044	ENSHGLG00000017442	SAFB2	63	75.618	Heterocephalus_glaber_female
ENSPCIG00000009518	-	99	76.015	ENSLAFG00000003836	SAFB2	62	72.287	Loxodonta_africana
ENSPCIG00000009518	-	99	78.821	ENSMFAG00000039706	SAFB2	65	75.000	Macaca_fascicularis
ENSPCIG00000009518	-	99	78.821	ENSMMUG00000017968	SAFB2	64	77.005	Macaca_mulatta
ENSPCIG00000009518	-	99	70.166	ENSMNEG00000032042	SAFB2	64	67.810	Macaca_nemestrina
ENSPCIG00000009518	-	99	78.821	ENSMLEG00000034562	SAFB2	65	75.327	Mandrillus_leucophaeus
ENSPCIG00000009518	-	95	69.498	ENSMAUG00000011573	Safb2	70	66.667	Mesocricetus_auratus
ENSPCIG00000009518	-	99	79.151	ENSMICG00000008711	SAFB2	64	74.388	Microcebus_murinus
ENSPCIG00000009518	-	95	73.958	ENSMOCG00000006827	Safb2	62	65.353	Microtus_ochrogaster
ENSPCIG00000009518	-	99	95.085	ENSMODG00000001178	SAFB2	62	95.085	Monodelphis_domestica
ENSPCIG00000009518	-	99	70.718	MGP_CAROLIEiJ_G0021779	Safb2	61	66.776	Mus_caroli
ENSPCIG00000009518	-	99	70.718	ENSMUSG00000042625	Safb2	61	66.941	Mus_musculus
ENSPCIG00000009518	-	99	70.166	MGP_PahariEiJ_G0020768	Safb2	61	66.118	Mus_pahari
ENSPCIG00000009518	-	96	71.264	MGP_SPRETEiJ_G0022690	Safb2	63	69.069	Mus_spretus
ENSPCIG00000009518	-	99	79.006	ENSMPUG00000006106	SAFB2	59	76.066	Mustela_putorius_furo
ENSPCIG00000009518	-	99	73.913	ENSMLUG00000001050	SAFB2	64	67.690	Myotis_lucifugus
ENSPCIG00000009518	-	99	78.085	ENSNLEG00000013514	SAFB2	64	74.510	Nomascus_leucogenys
ENSPCIG00000009518	-	100	91.854	ENSMEUG00000002456	SAFB2	68	91.077	Notamacropus_eugenii
ENSPCIG00000009518	-	99	68.819	ENSOPRG00000011523	-	64	66.232	Ochotona_princeps
ENSPCIG00000009518	-	100	74.415	ENSODEG00000014751	SAFB2	65	73.701	Octodon_degus
ENSPCIG00000009518	-	95	80.802	ENSOGAG00000006855	SAFB2	64	73.529	Otolemur_garnettii
ENSPCIG00000009518	-	99	64.706	ENSOARG00000007982	SAFB2	63	61.034	Ovis_aries
ENSPCIG00000009518	-	99	78.821	ENSPPAG00000043392	SAFB2	64	75.163	Pan_paniscus
ENSPCIG00000009518	-	99	77.860	ENSPPRG00000011310	SAFB2	64	75.286	Panthera_pardus
ENSPCIG00000009518	-	79	75.875	ENSPTIG00000015120	SAFB2	56	78.210	Panthera_tigris_altaica
ENSPCIG00000009518	-	99	78.439	ENSPTRG00000010334	SAFB2	65	75.000	Pan_troglodytes
ENSPCIG00000009518	-	99	78.821	ENSPANG00000007004	SAFB2	65	75.327	Papio_anubis
ENSPCIG00000009518	-	95	72.407	ENSPEMG00000016015	Safb2	61	66.162	Peromyscus_maniculatus_bairdii
ENSPCIG00000009518	-	99	79.006	ENSPPYG00000009427	SAFB2	64	75.327	Pongo_abelii
ENSPCIG00000009518	-	99	75.233	ENSPCAG00000006352	SAFB2	63	71.570	Procavia_capensis
ENSPCIG00000009518	-	99	75.651	ENSPCOG00000023260	SAFB2	63	72.397	Propithecus_coquereli
ENSPCIG00000009518	-	87	72.748	ENSRNOG00000049511	AABR07066522.1	53	71.594	Rattus_norvegicus
ENSPCIG00000009518	-	96	79.310	ENSRBIG00000033446	SAFB2	73	77.312	Rhinopithecus_bieti
ENSPCIG00000009518	-	99	79.006	ENSRROG00000006606	SAFB2	65	75.490	Rhinopithecus_roxellana
ENSPCIG00000009518	-	99	78.453	ENSSBOG00000032315	SAFB2	65	74.837	Saimiri_boliviensis_boliviensis
ENSPCIG00000009518	-	99	96.262	ENSSHAG00000012703	SAFB2	62	96.194	Sarcophilus_harrisii
ENSPCIG00000009518	-	99	66.231	ENSSARG00000000649	SAFB2	78	63.967	Sorex_araneus
ENSPCIG00000009518	-	99	78.782	ENSSSCG00000013523	SAFB2	68	75.614	Sus_scrofa
ENSPCIG00000009518	-	74	63.273	ENSTBEG00000012709	SAFB2	56	63.636	Tupaia_belangeri
ENSPCIG00000009518	-	99	70.974	ENSTTRG00000013585	SAFB2	64	68.040	Tursiops_truncatus
ENSPCIG00000009518	-	99	79.151	ENSUAMG00000024695	SAFB2	63	76.923	Ursus_americanus
ENSPCIG00000009518	-	88	76.265	ENSUMAG00000009585	SAFB2	54	73.091	Ursus_maritimus
ENSPCIG00000009518	-	78	82.199	ENSVPAG00000012041	SAFB2	51	82.514	Vicugna_pacos
ENSPCIG00000009518	-	99	79.006	ENSVVUG00000013695	SAFB2	68	75.980	Vulpes_vulpes