EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000009729 (Gene tree)
Gene ID: 110209535
Gene Symbol: TRUB1
Alias: -
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 42982 bases
Position: chrFUWB01000892.1:354577-397558
Accession: 110209535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000012219	TruB_N	PF01509.18	2.6e-51	1	1
ENSPCIP00000012220	TruB_N	PF01509.18	2.2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000015162	TRUB1-202	1050	-	ENSPCIP00000012220	349 (aa)	-	-
ENSPCIT00000015161	TRUB1-201	1107	-	ENSPCIP00000012219	368 (aa)	XP_020843800	UPI000A286580

Gene Model

Click here to download ENSPCIG00000009729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000009729's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000009729	TRUB1	79	80.822	ENSG00000165832	TRUB1	82	81.818	Homo_sapiens
ENSPCIG00000009729	TRUB1	66	69.672	ENSAPOG00000020565	trub1	89	69.672	Acanthochromis_polyacanthus
ENSPCIG00000009729	TRUB1	97	68.436	ENSAMEG00000014931	TRUB1	82	81.661	Ailuropoda_melanoleuca
ENSPCIG00000009729	TRUB1	68	63.052	ENSACIG00000003060	trub1	81	63.934	Amphilophus_citrinellus
ENSPCIG00000009729	TRUB1	66	69.672	ENSAOCG00000017188	trub1	89	69.672	Amphiprion_ocellaris
ENSPCIG00000009729	TRUB1	68	68.273	ENSAPEG00000015209	trub1	89	69.262	Amphiprion_percula
ENSPCIG00000009729	TRUB1	68	68.651	ENSATEG00000023291	trub1	90	68.526	Anabas_testudineus
ENSPCIG00000009729	TRUB1	76	77.778	ENSAPLG00000006808	TRUB1	97	78.889	Anas_platyrhynchos
ENSPCIG00000009729	TRUB1	73	74.532	ENSACAG00000009282	TRUB1	97	72.862	Anolis_carolinensis
ENSPCIG00000009729	TRUB1	79	81.724	ENSANAG00000022870	TRUB1	81	82.746	Aotus_nancymaae
ENSPCIG00000009729	TRUB1	68	67.470	ENSACLG00000000823	trub1	88	68.852	Astatotilapia_calliptera
ENSPCIG00000009729	TRUB1	68	68.924	ENSAMXG00000015845	trub1	82	70.082	Astyanax_mexicanus
ENSPCIG00000009729	TRUB1	79	81.164	ENSBTAG00000012955	TRUB1	81	82.168	Bos_taurus
ENSPCIG00000009729	TRUB1	79	81.507	ENSCJAG00000047815	TRUB1	81	82.517	Callithrix_jacchus
ENSPCIG00000009729	TRUB1	79	82.192	ENSCAFG00000011688	TRUB1	82	83.217	Canis_familiaris
ENSPCIG00000009729	TRUB1	79	82.192	ENSCAFG00020013237	TRUB1	82	83.217	Canis_lupus_dingo
ENSPCIG00000009729	TRUB1	79	81.164	ENSCHIG00000020884	TRUB1	86	82.168	Capra_hircus
ENSPCIG00000009729	TRUB1	79	80.822	ENSTSYG00000000446	TRUB1	81	81.818	Carlito_syrichta
ENSPCIG00000009729	TRUB1	67	75.641	ENSCAPG00000017088	TRUB1	100	75.319	Cavia_aperea
ENSPCIG00000009729	TRUB1	70	70.782	ENSCPOG00000030129	-	72	86.486	Cavia_porcellus
ENSPCIG00000009729	TRUB1	53	86.957	ENSCPOG00000040236	-	75	87.363	Cavia_porcellus
ENSPCIG00000009729	TRUB1	79	81.507	ENSCCAG00000028842	TRUB1	81	82.517	Cebus_capucinus
ENSPCIG00000009729	TRUB1	79	81.507	ENSCATG00000033431	TRUB1	82	82.517	Cercocebus_atys
ENSPCIG00000009729	TRUB1	54	85.638	ENSCLAG00000008664	TRUB1	75	87.363	Chinchilla_lanigera
ENSPCIG00000009729	TRUB1	79	81.507	ENSCSAG00000004891	TRUB1	82	82.517	Chlorocebus_sabaeus
ENSPCIG00000009729	TRUB1	67	76.613	ENSCHOG00000011931	TRUB1	70	77.686	Choloepus_hoffmanni
ENSPCIG00000009729	TRUB1	77	80.634	ENSCPBG00000003051	TRUB1	94	82.353	Chrysemys_picta_bellii
ENSPCIG00000009729	TRUB1	79	81.507	ENSCANG00000029445	TRUB1	82	82.517	Colobus_angolensis_palliatus
ENSPCIG00000009729	TRUB1	82	70.395	ENSCGRG00001010322	-	77	72.887	Cricetulus_griseus_chok1gshd
ENSPCIG00000009729	TRUB1	68	78.968	ENSCGRG00001016772	-	84	78.740	Cricetulus_griseus_chok1gshd
ENSPCIG00000009729	TRUB1	75	80.216	ENSCGRG00000010806	Trub1	87	80.634	Cricetulus_griseus_crigri
ENSPCIG00000009729	TRUB1	68	65.079	ENSCSEG00000011261	trub1	79	65.984	Cynoglossus_semilaevis
ENSPCIG00000009729	TRUB1	68	67.063	ENSCVAG00000008791	trub1	75	68.443	Cyprinodon_variegatus
ENSPCIG00000009729	TRUB1	77	63.958	ENSDARG00000053805	trub1	92	65.441	Danio_rerio
ENSPCIG00000009729	TRUB1	79	77.397	ENSDNOG00000001069	TRUB1	80	79.359	Dasypus_novemcinctus
ENSPCIG00000009729	TRUB1	75	81.295	ENSDORG00000010431	Trub1	82	81.690	Dipodomys_ordii
ENSPCIG00000009729	TRUB1	64	83.099	ENSETEG00000009183	TRUB1	62	85.294	Echinops_telfairi
ENSPCIG00000009729	TRUB1	90	72.072	ENSEASG00005014739	TRUB1	82	81.469	Equus_asinus_asinus
ENSPCIG00000009729	TRUB1	90	72.072	ENSECAG00000007177	TRUB1	82	81.469	Equus_caballus
ENSPCIG00000009729	TRUB1	79	69.863	ENSEEUG00000013993	TRUB1	80	70.629	Erinaceus_europaeus
ENSPCIG00000009729	TRUB1	67	71.020	ENSELUG00000000502	trub1	85	71.311	Esox_lucius
ENSPCIG00000009729	TRUB1	81	80.135	ENSFCAG00000031927	TRUB1	82	81.533	Felis_catus
ENSPCIG00000009729	TRUB1	67	78.367	ENSFALG00000002232	TRUB1	94	78.367	Ficedula_albicollis
ENSPCIG00000009729	TRUB1	54	87.234	ENSFDAG00000008140	TRUB1	75	89.011	Fukomys_damarensis
ENSPCIG00000009729	TRUB1	69	65.000	ENSFHEG00000004016	trub1	84	67.213	Fundulus_heteroclitus
ENSPCIG00000009729	TRUB1	76	75.089	ENSGALG00000009091	TRUB1	96	76.838	Gallus_gallus
ENSPCIG00000009729	TRUB1	70	63.566	ENSGAFG00000009193	trub1	86	65.574	Gambusia_affinis
ENSPCIG00000009729	TRUB1	53	69.072	ENSGACG00000015387	trub1	95	69.072	Gasterosteus_aculeatus
ENSPCIG00000009729	TRUB1	87	73.438	ENSGAGG00000009758	TRUB1	78	83.088	Gopherus_agassizii
ENSPCIG00000009729	TRUB1	79	81.164	ENSGGOG00000004583	TRUB1	82	82.168	Gorilla_gorilla
ENSPCIG00000009729	TRUB1	68	67.470	ENSHBUG00000016787	trub1	88	68.852	Haplochromis_burtoni
ENSPCIG00000009729	TRUB1	79	77.740	ENSHGLG00000015314	TRUB1	82	78.671	Heterocephalus_glaber_female
ENSPCIG00000009729	TRUB1	54	85.638	ENSHGLG00100009183	TRUB1	77	87.363	Heterocephalus_glaber_male
ENSPCIG00000009729	TRUB1	70	65.504	ENSHCOG00000017877	trub1	88	68.443	Hippocampus_comes
ENSPCIG00000009729	TRUB1	75	65.942	ENSIPUG00000017559	trub1	94	67.164	Ictalurus_punctatus
ENSPCIG00000009729	TRUB1	80	79.863	ENSSTOG00000003641	TRUB1	85	81.272	Ictidomys_tridecemlineatus
ENSPCIG00000009729	TRUB1	79	79.795	ENSJJAG00000011800	Trub1	84	80.769	Jaculus_jaculus
ENSPCIG00000009729	TRUB1	68	67.068	ENSKMAG00000006232	trub1	88	68.443	Kryptolebias_marmoratus
ENSPCIG00000009729	TRUB1	69	66.154	ENSLBEG00000026722	trub1	85	68.852	Labrus_bergylta
ENSPCIG00000009729	TRUB1	78	72.852	ENSLACG00000014885	TRUB1	93	75.090	Latimeria_chalumnae
ENSPCIG00000009729	TRUB1	77	69.718	ENSLOCG00000012979	trub1	92	70.741	Lepisosteus_oculatus
ENSPCIG00000009729	TRUB1	79	77.926	ENSLAFG00000015452	TRUB1	84	79.181	Loxodonta_africana
ENSPCIG00000009729	TRUB1	79	81.164	ENSMFAG00000031767	TRUB1	82	82.168	Macaca_fascicularis
ENSPCIG00000009729	TRUB1	79	81.507	ENSMMUG00000001902	TRUB1	82	82.517	Macaca_mulatta
ENSPCIG00000009729	TRUB1	79	76.370	ENSMNEG00000044646	TRUB1	81	77.273	Macaca_nemestrina
ENSPCIG00000009729	TRUB1	79	81.507	ENSMLEG00000042655	TRUB1	82	82.517	Mandrillus_leucophaeus
ENSPCIG00000009729	TRUB1	68	67.470	ENSMZEG00005024095	trub1	88	68.852	Maylandia_zebra
ENSPCIG00000009729	TRUB1	76	75.986	ENSMGAG00000011135	TRUB1	93	77.778	Meleagris_gallopavo
ENSPCIG00000009729	TRUB1	75	77.338	ENSMAUG00000011101	Trub1	84	77.817	Mesocricetus_auratus
ENSPCIG00000009729	TRUB1	79	81.661	ENSMICG00000016324	TRUB1	81	82.686	Microcebus_murinus
ENSPCIG00000009729	TRUB1	75	79.137	ENSMOCG00000017759	Trub1	86	78.671	Microtus_ochrogaster
ENSPCIG00000009729	TRUB1	78	98.606	ENSMODG00000009676	TRUB1	79	98.606	Monodelphis_domestica
ENSPCIG00000009729	TRUB1	77	78.873	MGP_CAROLIEiJ_G0023100	Trub1	85	79.021	Mus_caroli
ENSPCIG00000009729	TRUB1	77	78.169	ENSMUSG00000025086	Trub1	85	78.322	Mus_musculus
ENSPCIG00000009729	TRUB1	79	78.425	MGP_PahariEiJ_G0014588	Trub1	85	79.021	Mus_pahari
ENSPCIG00000009729	TRUB1	77	78.169	MGP_SPRETEiJ_G0024021	Trub1	85	78.322	Mus_spretus
ENSPCIG00000009729	TRUB1	80	82.935	ENSMPUG00000003556	TRUB1	82	83.972	Mustela_putorius_furo
ENSPCIG00000009729	TRUB1	81	80.808	ENSMLUG00000017686	TRUB1	84	82.517	Myotis_lucifugus
ENSPCIG00000009729	TRUB1	79	78.425	ENSNGAG00000018682	Trub1	82	79.371	Nannospalax_galili
ENSPCIG00000009729	TRUB1	69	67.059	ENSNBRG00000023393	trub1	87	69.262	Neolamprologus_brichardi
ENSPCIG00000009729	TRUB1	79	81.164	ENSNLEG00000016345	TRUB1	82	81.818	Nomascus_leucogenys
ENSPCIG00000009729	TRUB1	76	91.103	ENSMEUG00000006603	TRUB1	74	100.000	Notamacropus_eugenii
ENSPCIG00000009729	TRUB1	79	77.055	ENSOPRG00000009371	TRUB1	83	77.622	Ochotona_princeps
ENSPCIG00000009729	TRUB1	79	77.740	ENSODEG00000010854	TRUB1	82	78.322	Octodon_degus
ENSPCIG00000009729	TRUB1	68	67.470	ENSONIG00000007249	trub1	89	68.852	Oreochromis_niloticus
ENSPCIG00000009729	TRUB1	75	85.199	ENSOANG00000001556	TRUB1	90	85.662	Ornithorhynchus_anatinus
ENSPCIG00000009729	TRUB1	80	78.041	ENSOCUG00000009456	TRUB1	83	79.371	Oryctolagus_cuniculus
ENSPCIG00000009729	TRUB1	65	70.124	ENSORLG00000029719	trub1	86	70.124	Oryzias_latipes
ENSPCIG00000009729	TRUB1	65	69.710	ENSORLG00020016767	trub1	85	69.710	Oryzias_latipes_hni
ENSPCIG00000009729	TRUB1	65	69.710	ENSORLG00015014728	trub1	86	69.710	Oryzias_latipes_hsok
ENSPCIG00000009729	TRUB1	69	66.667	ENSOMEG00000014556	trub1	85	68.595	Oryzias_melastigma
ENSPCIG00000009729	TRUB1	79	81.507	ENSOGAG00000015895	TRUB1	82	82.517	Otolemur_garnettii
ENSPCIG00000009729	TRUB1	79	78.930	ENSOARG00000015591	TRUB1	83	79.863	Ovis_aries
ENSPCIG00000009729	TRUB1	79	81.164	ENSPPAG00000043645	TRUB1	82	82.168	Pan_paniscus
ENSPCIG00000009729	TRUB1	81	79.461	ENSPPRG00000007096	TRUB1	82	80.836	Panthera_pardus
ENSPCIG00000009729	TRUB1	81	79.798	ENSPTIG00000006378	TRUB1	82	81.185	Panthera_tigris_altaica
ENSPCIG00000009729	TRUB1	79	81.164	ENSPTRG00000002964	TRUB1	82	82.168	Pan_troglodytes
ENSPCIG00000009729	TRUB1	79	81.507	ENSPANG00000020712	TRUB1	82	82.517	Papio_anubis
ENSPCIG00000009729	TRUB1	76	80.645	ENSPSIG00000012877	TRUB1	93	81.250	Pelodiscus_sinensis
ENSPCIG00000009729	TRUB1	77	58.803	ENSPMGG00000000075	trub1	96	60.219	Periophthalmus_magnuspinnatus
ENSPCIG00000009729	TRUB1	78	78.819	ENSPEMG00000011156	Trub1	83	79.152	Peromyscus_maniculatus_bairdii
ENSPCIG00000009729	TRUB1	70	65.116	ENSPFOG00000009950	trub1	89	67.213	Poecilia_formosa
ENSPCIG00000009729	TRUB1	73	63.060	ENSPLAG00000013855	trub1	86	67.213	Poecilia_latipinna
ENSPCIG00000009729	TRUB1	70	65.116	ENSPMEG00000009064	trub1	88	67.213	Poecilia_mexicana
ENSPCIG00000009729	TRUB1	69	66.409	ENSPREG00000003343	trub1	88	68.033	Poecilia_reticulata
ENSPCIG00000009729	TRUB1	79	80.822	ENSPPYG00000002676	TRUB1	82	81.818	Pongo_abelii
ENSPCIG00000009729	TRUB1	80	73.311	ENSPCAG00000008427	TRUB1	81	74.126	Procavia_capensis
ENSPCIG00000009729	TRUB1	79	75.433	ENSPCOG00000024360	TRUB1	80	76.325	Propithecus_coquereli
ENSPCIG00000009729	TRUB1	56	88.889	ENSPVAG00000007575	TRUB1	76	90.547	Pteropus_vampyrus
ENSPCIG00000009729	TRUB1	68	67.470	ENSPNYG00000018614	trub1	88	68.852	Pundamilia_nyererei
ENSPCIG00000009729	TRUB1	75	57.609	ENSPNAG00000006881	trub1	94	55.789	Pygocentrus_nattereri
ENSPCIG00000009729	TRUB1	79	78.082	ENSRNOG00000017321	Trub1	84	78.671	Rattus_norvegicus
ENSPCIG00000009729	TRUB1	79	70.548	ENSRBIG00000033423	TRUB1	80	71.329	Rhinopithecus_bieti
ENSPCIG00000009729	TRUB1	79	81.507	ENSRROG00000033902	TRUB1	82	82.517	Rhinopithecus_roxellana
ENSPCIG00000009729	TRUB1	79	81.507	ENSSBOG00000024237	TRUB1	81	82.517	Saimiri_boliviensis_boliviensis
ENSPCIG00000009729	TRUB1	79	98.054	ENSSHAG00000009346	TRUB1	86	98.054	Sarcophilus_harrisii
ENSPCIG00000009729	TRUB1	69	70.356	ENSSFOG00015022124	trub1	83	72.727	Scleropages_formosus
ENSPCIG00000009729	TRUB1	69	66.538	ENSSMAG00000001020	trub1	87	69.262	Scophthalmus_maximus
ENSPCIG00000009729	TRUB1	65	69.038	ENSSDUG00000016414	trub1	88	69.262	Seriola_dumerili
ENSPCIG00000009729	TRUB1	65	69.456	ENSSLDG00000015486	trub1	88	69.672	Seriola_lalandi_dorsalis
ENSPCIG00000009729	TRUB1	75	80.144	ENSSPUG00000001642	TRUB1	93	80.882	Sphenodon_punctatus
ENSPCIG00000009729	TRUB1	68	69.076	ENSSPAG00000001217	trub1	88	70.492	Stegastes_partitus
ENSPCIG00000009729	TRUB1	79	79.795	ENSSSCG00000010653	TRUB1	82	81.119	Sus_scrofa
ENSPCIG00000009729	TRUB1	71	80.000	ENSTGUG00000010971	TRUB1	92	80.000	Taeniopygia_guttata
ENSPCIG00000009729	TRUB1	69	64.567	ENSTBEG00000002880	TRUB1	100	64.567	Tupaia_belangeri
ENSPCIG00000009729	TRUB1	56	89.372	ENSTTRG00000005767	TRUB1	77	91.045	Tursiops_truncatus
ENSPCIG00000009729	TRUB1	80	82.594	ENSUAMG00000024876	TRUB1	82	83.624	Ursus_americanus
ENSPCIG00000009729	TRUB1	80	82.935	ENSUMAG00000002411	TRUB1	85	83.972	Ursus_maritimus
ENSPCIG00000009729	TRUB1	79	81.507	ENSVPAG00000005507	TRUB1	81	82.918	Vicugna_pacos
ENSPCIG00000009729	TRUB1	79	82.192	ENSVVUG00000010085	TRUB1	69	83.217	Vulpes_vulpes
ENSPCIG00000009729	TRUB1	74	66.300	ENSXETG00000023828	trub1	97	66.667	Xenopus_tropicalis
ENSPCIG00000009729	TRUB1	70	64.341	ENSXCOG00000017847	trub1	86	66.255	Xiphophorus_couchianus
ENSPCIG00000009729	TRUB1	70	64.341	ENSXMAG00000014701	trub1	88	66.393	Xiphophorus_maculatus