EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPCIG00000009823 (Gene tree)
Gene ID
110212608
Gene Symbol
CPSF3
Alias
-
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Phascolarctos_cinereus
Status
putative
Strand
Minus strand
Length
60888 bases
Position
chrFUWB01001351.1:1160295-1221182
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPCIP00000012371CPSF73-100_CPF11718.86.7e-5311
ENSPCIP00000012370CPSF73-100_CPF11718.87.1e-5311
ENSPCIP00000012368CPSF73-100_CPF11718.83.2e-5011
ENSPCIP00000012370Beta-CaspPF10996.86.3e-3411
ENSPCIP00000012368Beta-CaspPF10996.86.3e-3411
ENSPCIP00000012371Beta-CaspPF10996.81.9e-3311
ENSPCIP00000012371Lactamase_BPF00753.271.3e-1811
ENSPCIP00000012368Lactamase_BPF00753.271.5e-1811
ENSPCIP00000012370Lactamase_BPF00753.271.5e-1811
ENSPCIP00000012370RMMBLPF07521.122e-2111
ENSPCIP00000012368RMMBLPF07521.122.1e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPCIT00000015348CPSF3-2032085-ENSPCIP00000012371629 (aa)--
ENSPCIT00000015347CPSF3-2022232-ENSPCIP00000012370678 (aa)--
ENSPCIT00000015344CPSF3-2012202-ENSPCIP00000012368668 (aa)--
Gene Model
Click here to download ENSPCIG00000009823's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000009823's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPCIG00000009823CPSF37238.755ENSPCIG00000007815-8138.755
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPCIG00000009823CPSF39897.699ENSG00000119203CPSF3100100.000Homo_sapiens
ENSPCIG00000009823CPSF37397.113ENSAPOG00000012241CPSF38996.368Acanthochromis_polyacanthus
ENSPCIG00000009823CPSF39885.583ENSAPOG00000022087cpsf39982.119Acanthochromis_polyacanthus
ENSPCIG00000009823CPSF39897.853ENSAMEG00000008493CPSF39897.751Ailuropoda_melanoleuca
ENSPCIG00000009823CPSF39386.032ENSACIG00000023663CPSF39986.032Amphilophus_citrinellus
ENSPCIG00000009823CPSF39282.927ENSACIG00000009846cpsf39982.166Amphilophus_citrinellus
ENSPCIG00000009823CPSF39885.736ENSAOCG00000022056cpsf39190.941Amphiprion_ocellaris
ENSPCIG00000009823CPSF39888.190ENSAOCG00000010077CPSF39687.838Amphiprion_ocellaris
ENSPCIG00000009823CPSF39888.190ENSAPEG00000021167CPSF39687.838Amphiprion_percula
ENSPCIG00000009823CPSF39885.890ENSAPEG00000019526cpsf39586.593Amphiprion_percula
ENSPCIG00000009823CPSF39883.436ENSATEG00000014525CPSF39683.183Anabas_testudineus
ENSPCIG00000009823CPSF39885.583ENSATEG00000003959cpsf39982.512Anabas_testudineus
ENSPCIG00000009823CPSF39994.792ENSAPLG00000006941CPSF39894.792Anas_platyrhynchos
ENSPCIG00000009823CPSF39492.441ENSACAG00000001759CPSF39992.126Anolis_carolinensis
ENSPCIG00000009823CPSF39991.480ENSANAG00000031254CPSF39991.480Aotus_nancymaae
ENSPCIG00000009823CPSF39886.043ENSACLG00000014484cpsf39985.263Astatotilapia_calliptera
ENSPCIG00000009823CPSF39386.349ENSACLG00000018846CPSF39986.349Astatotilapia_calliptera
ENSPCIG00000009823CPSF39888.190ENSAMXG00000004786cpsf39984.579Astyanax_mexicanus
ENSPCIG00000009823CPSF39898.006ENSBTAG00000019735CPSF39897.901Bos_taurus
ENSPCIG00000009823CPSF39458.723WBGene00013460cpsf-39058.723Caenorhabditis_elegans
ENSPCIG00000009823CPSF39897.239ENSCJAG00000006276CPSF39897.151Callithrix_jacchus
ENSPCIG00000009823CPSF39897.853ENSCAFG00000003375CPSF39397.751Canis_familiaris
ENSPCIG00000009823CPSF39098.339ENSCAFG00020026799CPSF39798.339Canis_lupus_dingo
ENSPCIG00000009823CPSF39898.006ENSCHIG00000013973CPSF39897.901Capra_hircus
ENSPCIG00000009823CPSF39897.546ENSTSYG00000002967CPSF39897.451Carlito_syrichta
ENSPCIG00000009823CPSF39896.626ENSCAPG00000013851CPSF310096.402Cavia_aperea
ENSPCIG00000009823CPSF39896.626ENSCPOG00000011299CPSF39896.402Cavia_porcellus
ENSPCIG00000009823CPSF39897.393ENSCCAG00000036730CPSF39997.301Cebus_capucinus
ENSPCIG00000009823CPSF39894.793ENSCATG00000014770CPSF39798.936Cercocebus_atys
ENSPCIG00000009823CPSF39896.472ENSCLAG00000002727CPSF39896.252Chinchilla_lanigera
ENSPCIG00000009823CPSF39889.505ENSCSAG00000007125CPSF39789.505Chlorocebus_sabaeus
ENSPCIG00000009823CPSF387100.000ENSCHOG00000000180CPSF370100.000Choloepus_hoffmanni
ENSPCIG00000009823CPSF39895.859ENSCPBG00000014074CPSF39695.495Chrysemys_picta_bellii
ENSPCIG00000009823CPSF39868.285ENSCING00000007214-9667.612Ciona_intestinalis
ENSPCIG00000009823CPSF39884.558ENSCANG00000034435CPSF39784.558Colobus_angolensis_palliatus
ENSPCIG00000009823CPSF39897.086ENSCGRG00001013134Cpsf39896.852Cricetulus_griseus_chok1gshd
ENSPCIG00000009823CPSF39897.086ENSCGRG00000018319Cpsf39896.852Cricetulus_griseus_crigri
ENSPCIG00000009823CPSF39887.136ENSCSEG00000002021CPSF39986.090Cynoglossus_semilaevis
ENSPCIG00000009823CPSF39888.804ENSCVAG00000015067CPSF39688.438Cyprinodon_variegatus
ENSPCIG00000009823CPSF39888.804ENSDARG00000027649cpsf39688.438Danio_rerio
ENSPCIG00000009823CPSF39896.478ENSDNOG00000008940CPSF39396.257Dasypus_novemcinctus
ENSPCIG00000009823CPSF39597.161ENSDORG00000014263Cpsf39797.161Dipodomys_ordii
ENSPCIG00000009823CPSF39868.196FBgn0261065Cpsf739667.368Drosophila_melanogaster
ENSPCIG00000009823CPSF39286.623ENSETEG00000003893CPSF39486.623Echinops_telfairi
ENSPCIG00000009823CPSF39781.327ENSEBUG00000009018cpsf39777.858Eptatretus_burgeri
ENSPCIG00000009823CPSF39897.853ENSEASG00005003970CPSF39897.751Equus_asinus_asinus
ENSPCIG00000009823CPSF39897.853ENSECAG00000019911CPSF39897.751Equus_caballus
ENSPCIG00000009823CPSF39881.859ENSEEUG00000015422CPSF39881.859Erinaceus_europaeus
ENSPCIG00000009823CPSF39888.190ENSELUG00000013775cpsf39985.039Esox_lucius
ENSPCIG00000009823CPSF39898.006ENSFCAG00000007852CPSF310097.836Felis_catus
ENSPCIG00000009823CPSF39595.570ENSFALG00000006572CPSF310095.054Ficedula_albicollis
ENSPCIG00000009823CPSF39896.012ENSFDAG00000006317CPSF39795.789Fukomys_damarensis
ENSPCIG00000009823CPSF39884.816ENSFHEG00000014774cpsf39684.511Fundulus_heteroclitus
ENSPCIG00000009823CPSF36068.215ENSFHEG00000012186CPSF39968.215Fundulus_heteroclitus
ENSPCIG00000009823CPSF39886.656ENSGMOG00000003157cpsf39685.736Gadus_morhua
ENSPCIG00000009823CPSF39895.706ENSGALG00000016424CPSF39994.961Gallus_gallus
ENSPCIG00000009823CPSF39888.650ENSGAFG00000008016CPSF39688.271Gambusia_affinis
ENSPCIG00000009823CPSF39481.289ENSGAFG00000019449cpsf39981.132Gambusia_affinis
ENSPCIG00000009823CPSF36993.148ENSGAGG00000025583CPSF39393.148Gopherus_agassizii
ENSPCIG00000009823CPSF39895.202ENSGGOG00000001757CPSF310097.480Gorilla_gorilla
ENSPCIG00000009823CPSF36081.235ENSHBUG00000014332CPSF39981.235Haplochromis_burtoni
ENSPCIG00000009823CPSF39886.043ENSHBUG00000001188cpsf39982.643Haplochromis_burtoni
ENSPCIG00000009823CPSF39895.859ENSHGLG00000000666CPSF39795.502Heterocephalus_glaber_female
ENSPCIG00000009823CPSF39895.859ENSHGLG00100007765CPSF39795.502Heterocephalus_glaber_male
ENSPCIG00000009823CPSF39884.816ENSHCOG00000007251cpsf39684.084Hippocampus_comes
ENSPCIG00000009823CPSF39887.270ENSHCOG00000015957CPSF39586.787Hippocampus_comes
ENSPCIG00000009823CPSF39886.810ENSIPUG00000023488cpsf39686.186Ictalurus_punctatus
ENSPCIG00000009823CPSF39897.546ENSSTOG00000004476CPSF39897.451Ictidomys_tridecemlineatus
ENSPCIG00000009823CPSF39896.779ENSJJAG00000023415Cpsf39896.552Jaculus_jaculus
ENSPCIG00000009823CPSF39884.663ENSKMAG00000002806cpsf39683.910Kryptolebias_marmoratus
ENSPCIG00000009823CPSF39888.190ENSKMAG00000007317CPSF39687.838Kryptolebias_marmoratus
ENSPCIG00000009823CPSF39879.479ENSLBEG00000020569cpsf39278.797Labrus_bergylta
ENSPCIG00000009823CPSF35679.357ENSLBEG00000015018-9979.357Labrus_bergylta
ENSPCIG00000009823CPSF39589.117ENSLBEG00000013492CPSF39689.117Labrus_bergylta
ENSPCIG00000009823CPSF39888.312ENSLACG00000008308CPSF39688.312Latimeria_chalumnae
ENSPCIG00000009823CPSF39890.520ENSLOCG00000016823cpsf39690.105Lepisosteus_oculatus
ENSPCIG00000009823CPSF39897.546ENSLAFG00000009467CPSF39897.451Loxodonta_africana
ENSPCIG00000009823CPSF39897.546ENSMFAG00000001339CPSF39997.368Macaca_fascicularis
ENSPCIG00000009823CPSF39597.468ENSMMUG00000018038CPSF310097.372Macaca_mulatta
ENSPCIG00000009823CPSF39884.408ENSMNEG00000039447CPSF39784.408Macaca_nemestrina
ENSPCIG00000009823CPSF39897.699ENSMLEG00000026825CPSF39897.601Mandrillus_leucophaeus
ENSPCIG00000009823CPSF39886.043ENSMAMG00000003076cpsf39685.263Mastacembelus_armatus
ENSPCIG00000009823CPSF39384.968ENSMAMG00000008835CPSF39984.968Mastacembelus_armatus
ENSPCIG00000009823CPSF39886.043ENSMZEG00005014358cpsf39982.643Maylandia_zebra
ENSPCIG00000009823CPSF39888.804ENSMZEG00005006258CPSF39986.349Maylandia_zebra
ENSPCIG00000009823CPSF39895.706ENSMGAG00000013995CPSF310095.202Meleagris_gallopavo
ENSPCIG00000009823CPSF35593.617ENSMAUG00000000166Cpsf310093.617Mesocricetus_auratus
ENSPCIG00000009823CPSF39892.054ENSMICG00000002363CPSF310091.562Microcebus_murinus
ENSPCIG00000009823CPSF39892.654ENSMOCG00000020067Cpsf39792.654Microtus_ochrogaster
ENSPCIG00000009823CPSF39854.531ENSMMOG00000011923CPSF38477.857Mola_mola
ENSPCIG00000009823CPSF39582.437ENSMMOG00000018212CPSF39881.860Mola_mola
ENSPCIG00000009823CPSF39897.774ENSMODG00000014703CPSF39897.774Monodelphis_domestica
ENSPCIG00000009823CPSF39483.125ENSMALG00000011474CPSF39687.015Monopterus_albus
ENSPCIG00000009823CPSF39886.196ENSMALG00000016416cpsf39982.540Monopterus_albus
ENSPCIG00000009823CPSF39896.779MGP_CAROLIEiJ_G0017640Cpsf39896.702Mus_caroli
ENSPCIG00000009823CPSF39896.779ENSMUSG00000054309Cpsf396100.000Mus_musculus
ENSPCIG00000009823CPSF39896.626MGP_PahariEiJ_G0029397Cpsf39896.552Mus_pahari
ENSPCIG00000009823CPSF39896.779MGP_SPRETEiJ_G0018481Cpsf39896.702Mus_spretus
ENSPCIG00000009823CPSF39897.546ENSMPUG00000013213CPSF39897.151Mustela_putorius_furo
ENSPCIG00000009823CPSF39896.631ENSMLUG00000010636CPSF39896.557Myotis_lucifugus
ENSPCIG00000009823CPSF39896.779ENSNGAG00000019836Cpsf39896.702Nannospalax_galili
ENSPCIG00000009823CPSF39885.583ENSNBRG00000004770cpsf39982.166Neolamprologus_brichardi
ENSPCIG00000009823CPSF39386.349ENSNBRG00000010525CPSF39986.349Neolamprologus_brichardi
ENSPCIG00000009823CPSF39897.546ENSNLEG00000013359CPSF310097.372Nomascus_leucogenys
ENSPCIG00000009823CPSF38784.932ENSMEUG00000013117-8084.932Notamacropus_eugenii
ENSPCIG00000009823CPSF39888.344ENSOPRG00000008902CPSF39888.306Ochotona_princeps
ENSPCIG00000009823CPSF39896.012ENSODEG00000003129CPSF39895.802Octodon_degus
ENSPCIG00000009823CPSF39886.043ENSONIG00000018812cpsf39685.263Oreochromis_niloticus
ENSPCIG00000009823CPSF38396.454ENSOANG00000008577CPSF310096.454Ornithorhynchus_anatinus
ENSPCIG00000009823CPSF39897.699ENSOCUG00000003728CPSF39897.601Oryctolagus_cuniculus
ENSPCIG00000009823CPSF39883.896ENSORLG00000018854cpsf39683.158Oryzias_latipes
ENSPCIG00000009823CPSF39883.742ENSORLG00020013331cpsf39683.008Oryzias_latipes_hni
ENSPCIG00000009823CPSF39883.896ENSORLG00015011017cpsf39980.286Oryzias_latipes_hsok
ENSPCIG00000009823CPSF39883.896ENSOMEG00000010647cpsf39283.308Oryzias_melastigma
ENSPCIG00000009823CPSF39887.106ENSOGAG00000001680CPSF39887.106Otolemur_garnettii
ENSPCIG00000009823CPSF39898.006ENSOARG00000015073CPSF39897.901Ovis_aries
ENSPCIG00000009823CPSF39897.699ENSPPAG00000042457CPSF39897.601Pan_paniscus
ENSPCIG00000009823CPSF39898.160ENSPPRG00000016790CPSF310097.836Panthera_pardus
ENSPCIG00000009823CPSF39898.160ENSPTIG00000003920CPSF310097.795Panthera_tigris_altaica
ENSPCIG00000009823CPSF39897.699ENSPTRG00000011638CPSF39897.601Pan_troglodytes
ENSPCIG00000009823CPSF39897.393ENSPANG00000016798CPSF39897.301Papio_anubis
ENSPCIG00000009823CPSF39890.031ENSPKIG00000023646cpsf39989.302Paramormyrops_kingsleyae
ENSPCIG00000009823CPSF39994.760ENSPSIG00000016144CPSF39894.760Pelodiscus_sinensis
ENSPCIG00000009823CPSF38287.681ENSPMGG00000006141-9587.681Periophthalmus_magnuspinnatus
ENSPCIG00000009823CPSF36078.765ENSPMGG00000015311CPSF39978.765Periophthalmus_magnuspinnatus
ENSPCIG00000009823CPSF39897.393ENSPEMG00000017668Cpsf39897.301Peromyscus_maniculatus_bairdii
ENSPCIG00000009823CPSF37890.595ENSPMAG00000004841cpsf39690.595Petromyzon_marinus
ENSPCIG00000009823CPSF39884.663ENSPFOG00000015922cpsf39684.384Poecilia_formosa
ENSPCIG00000009823CPSF39888.190ENSPFOG00000010418-9687.820Poecilia_formosa
ENSPCIG00000009823CPSF39884.663ENSPLAG00000000882cpsf39684.384Poecilia_latipinna
ENSPCIG00000009823CPSF36081.188ENSPLAG00000021300-9981.188Poecilia_latipinna
ENSPCIG00000009823CPSF39884.816ENSPMEG00000018309cpsf39684.535Poecilia_mexicana
ENSPCIG00000009823CPSF39481.761ENSPREG00000014875cpsf39981.604Poecilia_reticulata
ENSPCIG00000009823CPSF39882.975ENSPREG00000004482CPSF39682.583Poecilia_reticulata
ENSPCIG00000009823CPSF39892.954ENSPPYG00000012666CPSF39792.954Pongo_abelii
ENSPCIG00000009823CPSF39264.274ENSPCAG00000015042CPSF39464.274Procavia_capensis
ENSPCIG00000009823CPSF38691.698ENSPCOG00000023016CPSF39591.698Propithecus_coquereli
ENSPCIG00000009823CPSF39897.546ENSPVAG00000005324CPSF39797.444Pteropus_vampyrus
ENSPCIG00000009823CPSF38191.529ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSPCIG00000009823CPSF39886.043ENSPNYG00000004405cpsf39982.643Pundamilia_nyererei
ENSPCIG00000009823CPSF39886.963ENSPNAG00000023060cpsf39984.261Pygocentrus_nattereri
ENSPCIG00000009823CPSF39896.779ENSRNOG00000052418Cpsf39796.692Rattus_norvegicus
ENSPCIG00000009823CPSF39990.774ENSRBIG00000041615CPSF39992.890Rhinopithecus_bieti
ENSPCIG00000009823CPSF39996.875ENSRROG00000033792CPSF39996.875Rhinopithecus_roxellana
ENSPCIG00000009823CPSF39640.617YLR277CYSH18443.247Saccharomyces_cerevisiae
ENSPCIG00000009823CPSF39892.996ENSSBOG00000027263CPSF39792.996Saimiri_boliviensis_boliviensis
ENSPCIG00000009823CPSF39899.850ENSSHAG00000007024CPSF39899.850Sarcophilus_harrisii
ENSPCIG00000009823CPSF39889.724ENSSFOG00015002108cpsf39988.942Scleropages_formosus
ENSPCIG00000009823CPSF39587.697ENSSMAG00000020534CPSF39387.697Scophthalmus_maximus
ENSPCIG00000009823CPSF39888.344ENSSDUG00000018498CPSF39985.873Seriola_dumerili
ENSPCIG00000009823CPSF39886.196ENSSDUG00000002828cpsf39485.414Seriola_dumerili
ENSPCIG00000009823CPSF39886.043ENSSLDG00000008469cpsf38990.767Seriola_lalandi_dorsalis
ENSPCIG00000009823CPSF39888.344ENSSLDG00000005234CPSF39985.556Seriola_lalandi_dorsalis
ENSPCIG00000009823CPSF39880.060ENSSARG00000005186CPSF39880.060Sorex_araneus
ENSPCIG00000009823CPSF39992.433ENSSPUG00000015525CPSF39892.433Sphenodon_punctatus
ENSPCIG00000009823CPSF39888.344ENSSPAG00000002906CPSF39985.556Stegastes_partitus
ENSPCIG00000009823CPSF39885.736ENSSPAG00000018579cpsf39684.962Stegastes_partitus
ENSPCIG00000009823CPSF39897.853ENSSSCG00000020799CPSF39996.326Sus_scrofa
ENSPCIG00000009823CPSF39895.552ENSTGUG00000013016CPSF39895.052Taeniopygia_guttata
ENSPCIG00000009823CPSF39885.429ENSTRUG00000007030cpsf39584.812Takifugu_rubripes
ENSPCIG00000009823CPSF36072.727ENSTRUG00000013905CPSF39972.346Takifugu_rubripes
ENSPCIG00000009823CPSF39093.391ENSTBEG00000002707CPSF38293.391Tupaia_belangeri
ENSPCIG00000009823CPSF38692.473ENSTTRG00000000861CPSF38592.473Tursiops_truncatus
ENSPCIG00000009823CPSF39697.969ENSUAMG00000007535CPSF39694.887Ursus_americanus
ENSPCIG00000009823CPSF39597.785ENSUMAG00000003676CPSF310097.682Ursus_maritimus
ENSPCIG00000009823CPSF39594.795ENSVPAG00000008041CPSF310094.795Vicugna_pacos
ENSPCIG00000009823CPSF39897.853ENSVVUG00000002194CPSF39897.751Vulpes_vulpes
ENSPCIG00000009823CPSF39890.031ENSXETG00000008263cpsf39689.339Xenopus_tropicalis
ENSPCIG00000009823CPSF35579.784ENSXCOG00000000957-8779.784Xiphophorus_couchianus
ENSPCIG00000009823CPSF39884.663ENSXCOG00000019695cpsf39684.384Xiphophorus_couchianus
ENSPCIG00000009823CPSF39884.663ENSXMAG00000009784cpsf39983.901Xiphophorus_maculatus
ENSPCIG00000009823CPSF39898.000ENSXMAG00000027291CPSF39688.120Xiphophorus_maculatus

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