EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000010212 (Gene tree)
Gene ID: 110218159
Gene Symbol: RPUSD4
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 14808 bases
Position: chrFUWB01001355.1:940019-954826
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000012858	PseudoU_synth_2	PF00849.22	1.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000015973	RPUSD4-201	1095	-	ENSPCIP00000012858	364 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000010212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000010212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000010212	RPUSD4	75	31.164	ENSPCIG00000021901	RPUSD3	81	31.164

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000010212	RPUSD4	100	72.253	ENSG00000165526	RPUSD4	93	74.212	Homo_sapiens
ENSPCIG00000010212	RPUSD4	91	52.959	ENSAPOG00000011024	rpusd4	84	52.959	Acanthochromis_polyacanthus
ENSPCIG00000010212	RPUSD4	100	71.154	ENSAMEG00000000127	-	97	71.154	Ailuropoda_melanoleuca
ENSPCIG00000010212	RPUSD4	66	71.429	ENSAMEG00000005953	-	94	71.429	Ailuropoda_melanoleuca
ENSPCIG00000010212	RPUSD4	91	49.704	ENSACIG00000003533	rpusd4	99	49.704	Amphilophus_citrinellus
ENSPCIG00000010212	RPUSD4	91	52.976	ENSAOCG00000015409	rpusd4	83	52.976	Amphiprion_ocellaris
ENSPCIG00000010212	RPUSD4	91	53.274	ENSAPEG00000018935	rpusd4	83	53.274	Amphiprion_percula
ENSPCIG00000010212	RPUSD4	87	52.778	ENSATEG00000008059	rpusd4	80	52.778	Anabas_testudineus
ENSPCIG00000010212	RPUSD4	76	63.799	ENSAPLG00000013250	RPUSD4	99	62.373	Anas_platyrhynchos
ENSPCIG00000010212	RPUSD4	90	68.675	ENSACAG00000000189	RPUSD4	91	68.675	Anolis_carolinensis
ENSPCIG00000010212	RPUSD4	100	73.077	ENSANAG00000024050	RPUSD4	98	73.077	Aotus_nancymaae
ENSPCIG00000010212	RPUSD4	88	52.761	ENSACLG00000020996	rpusd4	83	52.761	Astatotilapia_calliptera
ENSPCIG00000010212	RPUSD4	86	55.063	ENSAMXG00000031479	rpusd4	89	55.063	Astyanax_mexicanus
ENSPCIG00000010212	RPUSD4	100	68.493	ENSBTAG00000020900	RPUSD4	97	68.493	Bos_taurus
ENSPCIG00000010212	RPUSD4	100	73.077	ENSCJAG00000042850	RPUSD4	92	73.077	Callithrix_jacchus
ENSPCIG00000010212	RPUSD4	93	75.294	ENSCAFG00000010488	RPUSD4	93	73.864	Canis_familiaris
ENSPCIG00000010212	RPUSD4	93	75.294	ENSCAFG00020010621	RPUSD4	93	73.864	Canis_lupus_dingo
ENSPCIG00000010212	RPUSD4	100	68.306	ENSCHIG00000009975	RPUSD4	97	68.579	Capra_hircus
ENSPCIG00000010212	RPUSD4	100	73.626	ENSTSYG00000008456	RPUSD4	97	73.626	Carlito_syrichta
ENSPCIG00000010212	RPUSD4	67	69.796	ENSCAPG00000006040	RPUSD4	95	69.796	Cavia_aperea
ENSPCIG00000010212	RPUSD4	93	72.941	ENSCPOG00000014971	RPUSD4	90	72.941	Cavia_porcellus
ENSPCIG00000010212	RPUSD4	100	74.863	ENSCCAG00000027838	RPUSD4	98	74.863	Cebus_capucinus
ENSPCIG00000010212	RPUSD4	100	71.154	ENSCATG00000041570	RPUSD4	97	71.154	Cercocebus_atys
ENSPCIG00000010212	RPUSD4	100	72.253	ENSCLAG00000016553	RPUSD4	97	72.253	Chinchilla_lanigera
ENSPCIG00000010212	RPUSD4	96	73.088	ENSCSAG00000002274	RPUSD4	94	73.088	Chlorocebus_sabaeus
ENSPCIG00000010212	RPUSD4	74	77.407	ENSCHOG00000010249	RPUSD4	95	77.407	Choloepus_hoffmanni
ENSPCIG00000010212	RPUSD4	78	70.526	ENSCPBG00000011175	RPUSD4	98	70.526	Chrysemys_picta_bellii
ENSPCIG00000010212	RPUSD4	74	42.086	ENSCSAVG00000000872	-	54	42.086	Ciona_savignyi
ENSPCIG00000010212	RPUSD4	98	71.148	ENSCANG00000039684	RPUSD4	95	71.148	Colobus_angolensis_palliatus
ENSPCIG00000010212	RPUSD4	100	70.604	ENSCGRG00001024141	Rpusd4	97	70.604	Cricetulus_griseus_chok1gshd
ENSPCIG00000010212	RPUSD4	100	70.604	ENSCGRG00000014415	Rpusd4	97	70.604	Cricetulus_griseus_crigri
ENSPCIG00000010212	RPUSD4	53	44.103	ENSCSEG00000006462	-	85	44.103	Cynoglossus_semilaevis
ENSPCIG00000010212	RPUSD4	90	53.453	ENSCVAG00000000392	rpusd4	94	53.453	Cyprinodon_variegatus
ENSPCIG00000010212	RPUSD4	90	53.153	ENSCVAG00000008761	rpusd4	85	53.153	Cyprinodon_variegatus
ENSPCIG00000010212	RPUSD4	88	51.070	ENSDARG00000012674	rpusd4	91	51.070	Danio_rerio
ENSPCIG00000010212	RPUSD4	100	69.231	ENSDNOG00000020026	RPUSD4	97	69.231	Dasypus_novemcinctus
ENSPCIG00000010212	RPUSD4	100	71.154	ENSDORG00000016717	Rpusd4	97	71.154	Dipodomys_ordii
ENSPCIG00000010212	RPUSD4	97	72.805	ENSETEG00000013953	RPUSD4	94	72.805	Echinops_telfairi
ENSPCIG00000010212	RPUSD4	100	72.527	ENSEASG00005022982	RPUSD4	97	72.527	Equus_asinus_asinus
ENSPCIG00000010212	RPUSD4	100	72.253	ENSECAG00000000557	RPUSD4	97	72.253	Equus_caballus
ENSPCIG00000010212	RPUSD4	81	72.472	ENSEEUG00000014036	RPUSD4	78	72.472	Erinaceus_europaeus
ENSPCIG00000010212	RPUSD4	89	55.522	ENSELUG00000008075	rpusd4	87	55.522	Esox_lucius
ENSPCIG00000010212	RPUSD4	100	70.604	ENSFCAG00000029789	RPUSD4	97	70.604	Felis_catus
ENSPCIG00000010212	RPUSD4	92	60.237	ENSFALG00000005171	RPUSD4	99	60.237	Ficedula_albicollis
ENSPCIG00000010212	RPUSD4	93	74.412	ENSFDAG00000014307	RPUSD4	91	74.412	Fukomys_damarensis
ENSPCIG00000010212	RPUSD4	90	52.537	ENSFHEG00000004329	rpusd4	86	52.537	Fundulus_heteroclitus
ENSPCIG00000010212	RPUSD4	88	51.534	ENSGMOG00000017726	rpusd4	96	51.534	Gadus_morhua
ENSPCIG00000010212	RPUSD4	95	57.224	ENSGALG00000024326	RPUSD4	98	58.263	Gallus_gallus
ENSPCIG00000010212	RPUSD4	91	49.558	ENSGAFG00000021559	rpusd4	86	49.558	Gambusia_affinis
ENSPCIG00000010212	RPUSD4	80	51.515	ENSGACG00000001657	rpusd4	100	48.529	Gasterosteus_aculeatus
ENSPCIG00000010212	RPUSD4	95	63.897	ENSGAGG00000000132	RPUSD4	96	63.897	Gopherus_agassizii
ENSPCIG00000010212	RPUSD4	100	72.527	ENSGGOG00000016494	RPUSD4	93	74.499	Gorilla_gorilla
ENSPCIG00000010212	RPUSD4	88	52.761	ENSHBUG00000022838	rpusd4	83	52.761	Haplochromis_burtoni
ENSPCIG00000010212	RPUSD4	100	70.879	ENSHGLG00000002285	RPUSD4	97	70.879	Heterocephalus_glaber_female
ENSPCIG00000010212	RPUSD4	100	70.879	ENSHGLG00100006385	RPUSD4	97	70.879	Heterocephalus_glaber_male
ENSPCIG00000010212	RPUSD4	89	53.333	ENSHCOG00000006612	rpusd4	84	53.333	Hippocampus_comes
ENSPCIG00000010212	RPUSD4	89	53.988	ENSIPUG00000023879	rusd4	84	53.988	Ictalurus_punctatus
ENSPCIG00000010212	RPUSD4	99	71.074	ENSSTOG00000025280	RPUSD4	99	71.074	Ictidomys_tridecemlineatus
ENSPCIG00000010212	RPUSD4	92	75.298	ENSJJAG00000018673	Rpusd4	91	75.298	Jaculus_jaculus
ENSPCIG00000010212	RPUSD4	91	52.679	ENSKMAG00000021805	rpusd4	87	52.679	Kryptolebias_marmoratus
ENSPCIG00000010212	RPUSD4	90	51.343	ENSLBEG00000020394	rpusd4	93	51.343	Labrus_bergylta
ENSPCIG00000010212	RPUSD4	89	64.832	ENSLACG00000011028	RPUSD4	82	64.832	Latimeria_chalumnae
ENSPCIG00000010212	RPUSD4	88	47.385	ENSLOCG00000003124	rpusd4	86	47.385	Lepisosteus_oculatus
ENSPCIG00000010212	RPUSD4	100	74.451	ENSLAFG00000005211	RPUSD4	97	74.451	Loxodonta_africana
ENSPCIG00000010212	RPUSD4	100	71.429	ENSMFAG00000039513	RPUSD4	97	71.429	Macaca_fascicularis
ENSPCIG00000010212	RPUSD4	100	71.154	ENSMMUG00000007933	RPUSD4	97	71.154	Macaca_mulatta
ENSPCIG00000010212	RPUSD4	100	71.429	ENSMNEG00000027414	RPUSD4	97	71.429	Macaca_nemestrina
ENSPCIG00000010212	RPUSD4	100	71.429	ENSMLEG00000042461	RPUSD4	97	71.429	Mandrillus_leucophaeus
ENSPCIG00000010212	RPUSD4	94	50.142	ENSMAMG00000023839	rpusd4	91	50.142	Mastacembelus_armatus
ENSPCIG00000010212	RPUSD4	88	52.761	ENSMZEG00005011999	rpusd4	83	52.761	Maylandia_zebra
ENSPCIG00000010212	RPUSD4	87	60.568	ENSMGAG00000000840	RPUSD4	99	61.059	Meleagris_gallopavo
ENSPCIG00000010212	RPUSD4	97	72.521	ENSMAUG00000010280	Rpusd4	93	72.521	Mesocricetus_auratus
ENSPCIG00000010212	RPUSD4	100	71.703	ENSMICG00000015979	RPUSD4	97	71.703	Microcebus_murinus
ENSPCIG00000010212	RPUSD4	95	70.640	ENSMOCG00000000661	Rpusd4	91	70.640	Microtus_ochrogaster
ENSPCIG00000010212	RPUSD4	85	53.968	ENSMMOG00000021731	rpusd4	93	53.968	Mola_mola
ENSPCIG00000010212	RPUSD4	95	87.320	ENSMODG00000004521	RPUSD4	89	87.320	Monodelphis_domestica
ENSPCIG00000010212	RPUSD4	83	54.575	ENSMALG00000005839	rpusd4	97	53.271	Monopterus_albus
ENSPCIG00000010212	RPUSD4	92	74.251	MGP_CAROLIEiJ_G0031954	Rpusd4	89	74.251	Mus_caroli
ENSPCIG00000010212	RPUSD4	92	73.353	ENSMUSG00000032044	Rpusd4	89	73.353	Mus_musculus
ENSPCIG00000010212	RPUSD4	100	69.780	MGP_PahariEiJ_G0014819	Rpusd4	97	69.780	Mus_pahari
ENSPCIG00000010212	RPUSD4	92	73.653	MGP_SPRETEiJ_G0033078	Rpusd4	89	73.653	Mus_spretus
ENSPCIG00000010212	RPUSD4	100	70.604	ENSMPUG00000006608	RPUSD4	97	70.604	Mustela_putorius_furo
ENSPCIG00000010212	RPUSD4	70	75.197	ENSMLUG00000029348	-	100	75.197	Myotis_lucifugus
ENSPCIG00000010212	RPUSD4	100	72.329	ENSMLUG00000017328	-	96	72.329	Myotis_lucifugus
ENSPCIG00000010212	RPUSD4	99	73.003	ENSNGAG00000020847	Rpusd4	95	73.003	Nannospalax_galili
ENSPCIG00000010212	RPUSD4	88	52.761	ENSNBRG00000005207	rpusd4	94	52.761	Neolamprologus_brichardi
ENSPCIG00000010212	RPUSD4	100	72.527	ENSNLEG00000007465	RPUSD4	97	72.527	Nomascus_leucogenys
ENSPCIG00000010212	RPUSD4	100	91.758	ENSMEUG00000004370	RPUSD4	98	91.758	Notamacropus_eugenii
ENSPCIG00000010212	RPUSD4	73	51.698	ENSOPRG00000013141	-	100	51.698	Ochotona_princeps
ENSPCIG00000010212	RPUSD4	100	70.330	ENSODEG00000004577	RPUSD4	97	70.330	Octodon_degus
ENSPCIG00000010212	RPUSD4	95	51.420	ENSONIG00000018879	rpusd4	93	51.420	Oreochromis_niloticus
ENSPCIG00000010212	RPUSD4	80	70.169	ENSOANG00000007247	RPUSD4	95	70.034	Ornithorhynchus_anatinus
ENSPCIG00000010212	RPUSD4	93	75.588	ENSOCUG00000017039	RPUSD4	90	75.588	Oryctolagus_cuniculus
ENSPCIG00000010212	RPUSD4	91	49.258	ENSORLG00000002750	rpusd4	92	49.258	Oryzias_latipes
ENSPCIG00000010212	RPUSD4	80	52.365	ENSORLG00020002044	rpusd4	74	52.365	Oryzias_latipes_hni
ENSPCIG00000010212	RPUSD4	80	52.703	ENSORLG00015020034	rpusd4	74	52.703	Oryzias_latipes_hsok
ENSPCIG00000010212	RPUSD4	88	52.439	ENSOMEG00000004861	rpusd4	80	52.439	Oryzias_melastigma
ENSPCIG00000010212	RPUSD4	93	74.926	ENSOGAG00000008922	RPUSD4	90	74.926	Otolemur_garnettii
ENSPCIG00000010212	RPUSD4	96	70.085	ENSOARG00000012238	RPUSD4	92	70.370	Ovis_aries
ENSPCIG00000010212	RPUSD4	100	72.527	ENSPPAG00000042883	RPUSD4	86	74.499	Pan_paniscus
ENSPCIG00000010212	RPUSD4	100	70.879	ENSPPRG00000003081	RPUSD4	97	70.879	Panthera_pardus
ENSPCIG00000010212	RPUSD4	100	70.879	ENSPTIG00000012059	RPUSD4	97	70.879	Panthera_tigris_altaica
ENSPCIG00000010212	RPUSD4	99	72.727	ENSPTRG00000004454	RPUSD4	96	72.727	Pan_troglodytes
ENSPCIG00000010212	RPUSD4	100	70.604	ENSPANG00000015040	RPUSD4	97	70.604	Papio_anubis
ENSPCIG00000010212	RPUSD4	91	58.084	ENSPKIG00000023986	rpusd4	86	58.084	Paramormyrops_kingsleyae
ENSPCIG00000010212	RPUSD4	82	67.667	ENSPSIG00000014268	RPUSD4	95	67.667	Pelodiscus_sinensis
ENSPCIG00000010212	RPUSD4	89	49.544	ENSPMGG00000002806	rpusd4	91	49.390	Periophthalmus_magnuspinnatus
ENSPCIG00000010212	RPUSD4	100	64.835	ENSPEMG00000000278	Rpusd4	96	64.835	Peromyscus_maniculatus_bairdii
ENSPCIG00000010212	RPUSD4	84	43.658	ENSPMAG00000008183	rpusd4	98	43.658	Petromyzon_marinus
ENSPCIG00000010212	RPUSD4	91	51.613	ENSPFOG00000019030	rpusd4	89	51.613	Poecilia_formosa
ENSPCIG00000010212	RPUSD4	91	52.212	ENSPLAG00000016848	rpusd4	86	52.212	Poecilia_latipinna
ENSPCIG00000010212	RPUSD4	91	51.327	ENSPMEG00000017534	rpusd4	86	51.327	Poecilia_mexicana
ENSPCIG00000010212	RPUSD4	87	51.852	ENSPREG00000005689	rpusd4	83	51.852	Poecilia_reticulata
ENSPCIG00000010212	RPUSD4	100	72.527	ENSPPYG00000004043	RPUSD4	93	74.499	Pongo_abelii
ENSPCIG00000010212	RPUSD4	81	69.663	ENSPCAG00000000753	RPUSD4	80	69.663	Procavia_capensis
ENSPCIG00000010212	RPUSD4	100	65.934	ENSPCOG00000020694	RPUSD4	98	65.934	Propithecus_coquereli
ENSPCIG00000010212	RPUSD4	100	72.527	ENSPVAG00000000988	RPUSD4	97	72.527	Pteropus_vampyrus
ENSPCIG00000010212	RPUSD4	88	52.454	ENSPNYG00000009652	rpusd4	83	52.454	Pundamilia_nyererei
ENSPCIG00000010212	RPUSD4	96	51.852	ENSPNAG00000012264	rpusd4	92	51.852	Pygocentrus_nattereri
ENSPCIG00000010212	RPUSD4	98	71.709	ENSRNOG00000011567	Rpusd4	93	71.709	Rattus_norvegicus
ENSPCIG00000010212	RPUSD4	99	71.468	ENSRBIG00000034842	RPUSD4	97	70.879	Rhinopithecus_bieti
ENSPCIG00000010212	RPUSD4	99	71.468	ENSRROG00000039753	RPUSD4	97	70.879	Rhinopithecus_roxellana
ENSPCIG00000010212	RPUSD4	100	73.626	ENSSBOG00000030413	RPUSD4	98	73.626	Saimiri_boliviensis_boliviensis
ENSPCIG00000010212	RPUSD4	83	91.060	ENSSHAG00000008304	RPUSD4	100	91.060	Sarcophilus_harrisii
ENSPCIG00000010212	RPUSD4	92	57.059	ENSSFOG00015006203	rpusd4	91	57.647	Scleropages_formosus
ENSPCIG00000010212	RPUSD4	91	52.507	ENSSMAG00000020978	rpusd4	88	52.507	Scophthalmus_maximus
ENSPCIG00000010212	RPUSD4	86	51.562	ENSSDUG00000013399	rpusd4	84	51.562	Seriola_dumerili
ENSPCIG00000010212	RPUSD4	86	51.562	ENSSLDG00000023507	rpusd4	84	51.562	Seriola_lalandi_dorsalis
ENSPCIG00000010212	RPUSD4	92	64.118	ENSSPUG00000001401	RPUSD4	99	62.740	Sphenodon_punctatus
ENSPCIG00000010212	RPUSD4	91	53.412	ENSSPAG00000012163	rpusd4	86	53.412	Stegastes_partitus
ENSPCIG00000010212	RPUSD4	100	71.154	ENSSSCG00000015233	RPUSD4	97	71.154	Sus_scrofa
ENSPCIG00000010212	RPUSD4	82	64.333	ENSTGUG00000000773	RPUSD4	100	64.333	Taeniopygia_guttata
ENSPCIG00000010212	RPUSD4	89	50.456	ENSTRUG00000012283	rpusd4	84	50.456	Takifugu_rubripes
ENSPCIG00000010212	RPUSD4	88	50.920	ENSTNIG00000014676	rpusd4	82	50.920	Tetraodon_nigroviridis
ENSPCIG00000010212	RPUSD4	100	69.231	ENSTTRG00000001555	RPUSD4	97	69.231	Tursiops_truncatus
ENSPCIG00000010212	RPUSD4	51	70.968	ENSUAMG00000005503	-	97	70.968	Ursus_americanus
ENSPCIG00000010212	RPUSD4	93	75.516	ENSUMAG00000002219	RPUSD4	90	75.516	Ursus_maritimus
ENSPCIG00000010212	RPUSD4	71	71.698	ENSVPAG00000001066	RPUSD4	100	71.698	Vicugna_pacos
ENSPCIG00000010212	RPUSD4	93	74.412	ENSVVUG00000020101	RPUSD4	90	74.412	Vulpes_vulpes
ENSPCIG00000010212	RPUSD4	96	48.925	ENSXCOG00000004676	rpusd4	95	48.925	Xiphophorus_couchianus
ENSPCIG00000010212	RPUSD4	90	51.929	ENSXMAG00000023351	rpusd4	86	51.929	Xiphophorus_maculatus