EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000010642 (Gene tree)
Gene ID: 110213243
Gene Symbol: SF3B1
Alias: -
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 46502 bases
Position: chrFUWB01000518.1:567089-613590
Accession: 110213243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000013519	SF3b1	PF08920.10	5.3e-47	1	1
ENSPCIP00000013522	SF3b1	PF08920.10	8.1e-47	1	1
ENSPCIP00000013518	SF3b1	PF08920.10	8.3e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000016736	SF3B1-203	4020	-	ENSPCIP00000013522	1227 (aa)	-	-
ENSPCIT00000016733	SF3B1-202	4146	-	ENSPCIP00000013519	1269 (aa)	-	-
ENSPCIT00000016731	SF3B1-201	4248	-	ENSPCIP00000013518	1303 (aa)	XP_020849175	UPI000A286E61

Gene Model

Click here to download ENSPCIG00000010642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000010642's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000010642	SF3B1	100	99.233	ENSG00000115524	SF3B1	100	99.233	Homo_sapiens
ENSPCIG00000010642	SF3B1	100	92.938	ENSAPOG00000011894	sf3b1	100	92.938	Acanthochromis_polyacanthus
ENSPCIG00000010642	SF3B1	99	99.151	ENSAMEG00000013809	SF3B1	99	99.151	Ailuropoda_melanoleuca
ENSPCIG00000010642	SF3B1	100	92.683	ENSACIG00000020910	sf3b1	97	92.530	Amphilophus_citrinellus
ENSPCIG00000010642	SF3B1	100	93.090	ENSAOCG00000004478	sf3b1	100	93.090	Amphiprion_ocellaris
ENSPCIG00000010642	SF3B1	100	93.090	ENSAPEG00000012937	sf3b1	100	93.090	Amphiprion_percula
ENSPCIG00000010642	SF3B1	100	93.237	ENSATEG00000020435	sf3b1	100	93.237	Anabas_testudineus
ENSPCIG00000010642	SF3B1	99	98.918	ENSAPLG00000003993	SF3B1	99	98.918	Anas_platyrhynchos
ENSPCIG00000010642	SF3B1	100	98.542	ENSACAG00000009612	SF3B1	100	98.542	Anolis_carolinensis
ENSPCIG00000010642	SF3B1	100	99.233	ENSANAG00000021577	SF3B1	100	99.655	Aotus_nancymaae
ENSPCIG00000010642	SF3B1	100	92.325	ENSACLG00000023470	sf3b1	100	92.173	Astatotilapia_calliptera
ENSPCIG00000010642	SF3B1	100	93.693	ENSAMXG00000002219	sf3b1	100	93.541	Astyanax_mexicanus
ENSPCIG00000010642	SF3B1	100	99.156	ENSBTAG00000008915	SF3B1	100	99.156	Bos_taurus
ENSPCIG00000010642	SF3B1	98	66.390	WBGene00011605	sftb-1	98	66.465	Caenorhabditis_elegans
ENSPCIG00000010642	SF3B1	100	99.233	ENSCJAG00000003902	SF3B1	100	99.233	Callithrix_jacchus
ENSPCIG00000010642	SF3B1	100	99.233	ENSCAFG00000010826	SF3B1	100	99.233	Canis_familiaris
ENSPCIG00000010642	SF3B1	100	99.233	ENSCAFG00020004750	SF3B1	100	99.233	Canis_lupus_dingo
ENSPCIG00000010642	SF3B1	100	99.156	ENSCHIG00000015226	SF3B1	100	99.156	Capra_hircus
ENSPCIG00000010642	SF3B1	100	99.156	ENSTSYG00000009214	SF3B1	100	99.156	Carlito_syrichta
ENSPCIG00000010642	SF3B1	99	99.077	ENSCAPG00000006547	SF3B1	99	99.077	Cavia_aperea
ENSPCIG00000010642	SF3B1	99	99.227	ENSCPOG00000009353	SF3B1	100	99.227	Cavia_porcellus
ENSPCIG00000010642	SF3B1	100	99.233	ENSCCAG00000020506	SF3B1	100	99.233	Cebus_capucinus
ENSPCIG00000010642	SF3B1	100	99.233	ENSCATG00000035735	SF3B1	100	99.233	Cercocebus_atys
ENSPCIG00000010642	SF3B1	99	99.228	ENSCLAG00000014767	SF3B1	99	99.228	Chinchilla_lanigera
ENSPCIG00000010642	SF3B1	100	99.233	ENSCSAG00000011505	SF3B1	100	99.233	Chlorocebus_sabaeus
ENSPCIG00000010642	SF3B1	76	95.385	ENSCHOG00000009860	SF3B1	76	95.385	Choloepus_hoffmanni
ENSPCIG00000010642	SF3B1	100	98.926	ENSCPBG00000021902	SF3B1	100	98.926	Chrysemys_picta_bellii
ENSPCIG00000010642	SF3B1	68	77.753	ENSCING00000002558	-	99	78.683	Ciona_intestinalis
ENSPCIG00000010642	SF3B1	99	79.394	ENSCSAVG00000002559	-	99	79.075	Ciona_savignyi
ENSPCIG00000010642	SF3B1	100	99.233	ENSCANG00000029415	SF3B1	100	99.233	Colobus_angolensis_palliatus
ENSPCIG00000010642	SF3B1	100	99.233	ENSCGRG00001016990	Sf3b1	100	99.233	Cricetulus_griseus_chok1gshd
ENSPCIG00000010642	SF3B1	100	99.233	ENSCGRG00000005301	Sf3b1	100	99.233	Cricetulus_griseus_crigri
ENSPCIG00000010642	SF3B1	100	89.482	ENSCSEG00000003860	sf3b1	100	89.329	Cynoglossus_semilaevis
ENSPCIG00000010642	SF3B1	96	93.123	ENSCVAG00000003680	sf3b1	99	93.123	Cyprinodon_variegatus
ENSPCIG00000010642	SF3B1	100	93.090	ENSDARG00000056138	sf3b1	100	93.014	Danio_rerio
ENSPCIG00000010642	SF3B1	100	99.157	ENSDNOG00000011754	SF3B1	100	99.157	Dasypus_novemcinctus
ENSPCIG00000010642	SF3B1	99	96.834	ENSDORG00000002399	Sf3b1	100	96.834	Dipodomys_ordii
ENSPCIG00000010642	SF3B1	100	76.397	FBgn0031266	Sf3b1	100	76.397	Drosophila_melanogaster
ENSPCIG00000010642	SF3B1	83	98.516	ENSETEG00000009188	SF3B1	100	98.516	Echinops_telfairi
ENSPCIG00000010642	SF3B1	99	87.030	ENSEBUG00000004325	sf3b1	100	90.009	Eptatretus_burgeri
ENSPCIG00000010642	SF3B1	100	99.233	ENSEASG00005020159	SF3B1	98	99.233	Equus_asinus_asinus
ENSPCIG00000010642	SF3B1	100	99.233	ENSECAG00000021657	SF3B1	98	99.233	Equus_caballus
ENSPCIG00000010642	SF3B1	89	98.077	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSPCIG00000010642	SF3B1	100	92.528	ENSELUG00000005977	sf3b1	98	92.604	Esox_lucius
ENSPCIG00000010642	SF3B1	100	99.233	ENSFCAG00000005038	SF3B1	100	99.233	Felis_catus
ENSPCIG00000010642	SF3B1	99	98.841	ENSFALG00000004281	SF3B1	99	98.841	Ficedula_albicollis
ENSPCIG00000010642	SF3B1	100	99.233	ENSFDAG00000017510	SF3B1	100	99.233	Fukomys_damarensis
ENSPCIG00000010642	SF3B1	100	92.407	ENSFHEG00000014333	sf3b1	100	92.407	Fundulus_heteroclitus
ENSPCIG00000010642	SF3B1	100	93.069	ENSGMOG00000006773	sf3b1	100	93.069	Gadus_morhua
ENSPCIG00000010642	SF3B1	100	98.926	ENSGALG00000008038	SF3B1	100	98.926	Gallus_gallus
ENSPCIG00000010642	SF3B1	100	91.457	ENSGAFG00000000704	sf3b1	99	92.978	Gambusia_affinis
ENSPCIG00000010642	SF3B1	100	92.835	ENSGACG00000008839	sf3b1	100	93.293	Gasterosteus_aculeatus
ENSPCIG00000010642	SF3B1	100	98.247	ENSGAGG00000017478	SF3B1	100	98.247	Gopherus_agassizii
ENSPCIG00000010642	SF3B1	99	92.249	ENSGGOG00000009264	SF3B1	99	93.462	Gorilla_gorilla
ENSPCIG00000010642	SF3B1	99	92.390	ENSHBUG00000007705	sf3b1	99	92.237	Haplochromis_burtoni
ENSPCIG00000010642	SF3B1	99	99.228	ENSHGLG00000008285	-	99	99.228	Heterocephalus_glaber_female
ENSPCIG00000010642	SF3B1	99	97.220	ENSHGLG00100005535	-	99	97.220	Heterocephalus_glaber_male
ENSPCIG00000010642	SF3B1	100	92.372	ENSHCOG00000016775	sf3b1	100	92.296	Hippocampus_comes
ENSPCIG00000010642	SF3B1	100	93.541	ENSIPUG00000013171	sf3b1	100	93.541	Ictalurus_punctatus
ENSPCIG00000010642	SF3B1	100	99.233	ENSSTOG00000011034	SF3B1	100	99.233	Ictidomys_tridecemlineatus
ENSPCIG00000010642	SF3B1	99	99.147	ENSJJAG00000010903	Sf3b1	99	99.147	Jaculus_jaculus
ENSPCIG00000010642	SF3B1	100	92.500	ENSKMAG00000004009	sf3b1	100	92.500	Kryptolebias_marmoratus
ENSPCIG00000010642	SF3B1	100	93.206	ENSLBEG00000022208	sf3b1	100	93.053	Labrus_bergylta
ENSPCIG00000010642	SF3B1	99	91.877	ENSLACG00000014832	SF3B1	99	91.877	Latimeria_chalumnae
ENSPCIG00000010642	SF3B1	100	94.461	ENSLOCG00000003899	sf3b1	100	94.310	Lepisosteus_oculatus
ENSPCIG00000010642	SF3B1	100	99.233	ENSLAFG00000001956	SF3B1	100	99.233	Loxodonta_africana
ENSPCIG00000010642	SF3B1	99	99.228	ENSMMUG00000022430	SF3B1	99	99.228	Macaca_mulatta
ENSPCIG00000010642	SF3B1	100	99.233	ENSMNEG00000042333	SF3B1	100	99.655	Macaca_nemestrina
ENSPCIG00000010642	SF3B1	95	92.915	ENSMLEG00000026141	SF3B1	99	93.462	Mandrillus_leucophaeus
ENSPCIG00000010642	SF3B1	100	93.161	ENSMAMG00000010241	sf3b1	100	93.161	Mastacembelus_armatus
ENSPCIG00000010642	SF3B1	100	92.325	ENSMZEG00005021254	sf3b1	100	92.173	Maylandia_zebra
ENSPCIG00000010642	SF3B1	99	98.377	ENSMGAG00000007017	SF3B1	99	98.377	Meleagris_gallopavo
ENSPCIG00000010642	SF3B1	100	94.571	ENSMAUG00000009071	Sf3b1	100	94.571	Mesocricetus_auratus
ENSPCIG00000010642	SF3B1	100	99.156	ENSMICG00000013879	SF3B1	100	99.156	Microcebus_murinus
ENSPCIG00000010642	SF3B1	99	94.753	ENSMOCG00000000455	Sf3b1	99	94.753	Microtus_ochrogaster
ENSPCIG00000010642	SF3B1	83	92.420	ENSMMOG00000000475	sf3b1	100	92.420	Mola_mola
ENSPCIG00000010642	SF3B1	100	99.923	ENSMODG00000012275	SF3B1	100	99.923	Monodelphis_domestica
ENSPCIG00000010642	SF3B1	100	93.161	ENSMALG00000017211	sf3b1	100	93.161	Monopterus_albus
ENSPCIG00000010642	SF3B1	100	99.233	MGP_CAROLIEiJ_G0014141	Sf3b1	100	99.233	Mus_caroli
ENSPCIG00000010642	SF3B1	100	99.233	ENSMUSG00000025982	Sf3b1	100	99.233	Mus_musculus
ENSPCIG00000010642	SF3B1	100	99.233	MGP_SPRETEiJ_G0014947	Sf3b1	100	99.233	Mus_spretus
ENSPCIG00000010642	SF3B1	100	99.233	ENSMPUG00000007799	SF3B1	100	99.233	Mustela_putorius_furo
ENSPCIG00000010642	SF3B1	100	98.006	ENSMLUG00000000840	SF3B1	100	98.006	Myotis_lucifugus
ENSPCIG00000010642	SF3B1	99	98.923	ENSNGAG00000021884	-	100	98.923	Nannospalax_galili
ENSPCIG00000010642	SF3B1	100	88.720	ENSNBRG00000015816	sf3b1	100	88.720	Neolamprologus_brichardi
ENSPCIG00000010642	SF3B1	100	99.233	ENSNLEG00000006861	SF3B1	100	99.233	Nomascus_leucogenys
ENSPCIG00000010642	SF3B1	71	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSPCIG00000010642	SF3B1	100	87.653	ENSOPRG00000008596	SF3B1	100	87.653	Ochotona_princeps
ENSPCIG00000010642	SF3B1	100	99.233	ENSODEG00000011153	-	100	99.233	Octodon_degus
ENSPCIG00000010642	SF3B1	100	92.325	ENSONIG00000013758	sf3b1	100	92.173	Oreochromis_niloticus
ENSPCIG00000010642	SF3B1	83	98.893	ENSOCUG00000012722	-	96	98.893	Oryctolagus_cuniculus
ENSPCIG00000010642	SF3B1	100	92.857	ENSORLG00000020219	sf3b1	100	92.857	Oryzias_latipes
ENSPCIG00000010642	SF3B1	100	92.857	ENSORLG00020001746	sf3b1	100	92.857	Oryzias_latipes_hni
ENSPCIG00000010642	SF3B1	66	90.238	ENSORLG00015001759	sf3b1	98	90.238	Oryzias_latipes_hsok
ENSPCIG00000010642	SF3B1	100	92.787	ENSOMEG00000019231	sf3b1	100	92.787	Oryzias_melastigma
ENSPCIG00000010642	SF3B1	52	81.546	ENSOGAG00000000267	-	100	81.546	Otolemur_garnettii
ENSPCIG00000010642	SF3B1	100	99.156	ENSOARG00000015374	SF3B1	100	99.156	Ovis_aries
ENSPCIG00000010642	SF3B1	100	99.233	ENSPPAG00000035007	SF3B1	100	99.233	Pan_paniscus
ENSPCIG00000010642	SF3B1	100	99.233	ENSPPRG00000009090	SF3B1	100	99.233	Panthera_pardus
ENSPCIG00000010642	SF3B1	100	99.233	ENSPTIG00000021557	SF3B1	100	99.233	Panthera_tigris_altaica
ENSPCIG00000010642	SF3B1	99	90.685	ENSPTRG00000012771	SF3B1	99	90.685	Pan_troglodytes
ENSPCIG00000010642	SF3B1	100	99.233	ENSPANG00000013417	SF3B1	100	99.233	Papio_anubis
ENSPCIG00000010642	SF3B1	100	94.673	ENSPKIG00000000784	sf3b1	100	94.521	Paramormyrops_kingsleyae
ENSPCIG00000010642	SF3B1	99	97.757	ENSPSIG00000017222	SF3B1	98	97.757	Pelodiscus_sinensis
ENSPCIG00000010642	SF3B1	90	93.513	ENSPMGG00000004330	sf3b1	99	93.345	Periophthalmus_magnuspinnatus
ENSPCIG00000010642	SF3B1	99	99.228	ENSPEMG00000010699	Sf3b1	100	99.228	Peromyscus_maniculatus_bairdii
ENSPCIG00000010642	SF3B1	100	89.818	ENSPMAG00000001311	sf3b1	100	89.970	Petromyzon_marinus
ENSPCIG00000010642	SF3B1	100	92.868	ENSPFOG00000000073	sf3b1	100	92.868	Poecilia_formosa
ENSPCIG00000010642	SF3B1	100	92.938	ENSPLAG00000002293	sf3b1	100	92.938	Poecilia_latipinna
ENSPCIG00000010642	SF3B1	100	92.938	ENSPMEG00000000446	sf3b1	98	92.938	Poecilia_mexicana
ENSPCIG00000010642	SF3B1	100	93.014	ENSPREG00000019652	sf3b1	100	93.014	Poecilia_reticulata
ENSPCIG00000010642	SF3B1	100	98.723	ENSPPYG00000013044	SF3B1	96	98.723	Pongo_abelii
ENSPCIG00000010642	SF3B1	100	99.080	ENSPCAG00000009292	SF3B1	100	99.080	Procavia_capensis
ENSPCIG00000010642	SF3B1	100	99.156	ENSPCOG00000024074	SF3B1	100	99.156	Propithecus_coquereli
ENSPCIG00000010642	SF3B1	100	99.233	ENSPVAG00000008302	SF3B1	100	99.233	Pteropus_vampyrus
ENSPCIG00000010642	SF3B1	100	92.249	ENSPNYG00000014939	sf3b1	100	92.097	Pundamilia_nyererei
ENSPCIG00000010642	SF3B1	100	93.389	ENSPNAG00000008288	sf3b1	100	93.465	Pygocentrus_nattereri
ENSPCIG00000010642	SF3B1	100	99.233	ENSRNOG00000013516	Sf3b1	100	99.233	Rattus_norvegicus
ENSPCIG00000010642	SF3B1	99	95.469	ENSRBIG00000026096	SF3B1	100	95.469	Rhinopithecus_bieti
ENSPCIG00000010642	SF3B1	100	99.233	ENSRROG00000031308	SF3B1	100	99.233	Rhinopithecus_roxellana
ENSPCIG00000010642	SF3B1	100	99.233	ENSSBOG00000020080	SF3B1	100	99.233	Saimiri_boliviensis_boliviensis
ENSPCIG00000010642	SF3B1	100	99.923	ENSSHAG00000017564	SF3B1	100	99.923	Sarcophilus_harrisii
ENSPCIG00000010642	SF3B1	100	94.153	ENSSFOG00015021535	sf3b1	100	94.305	Scleropages_formosus
ENSPCIG00000010642	SF3B1	99	92.348	ENSSMAG00000013977	sf3b1	99	92.273	Scophthalmus_maximus
ENSPCIG00000010642	SF3B1	100	93.085	ENSSDUG00000017422	sf3b1	100	93.085	Seriola_dumerili
ENSPCIG00000010642	SF3B1	100	93.009	ENSSLDG00000019495	sf3b1	100	93.009	Seriola_lalandi_dorsalis
ENSPCIG00000010642	SF3B1	76	99.824	ENSSARG00000007016	SF3B1	76	99.824	Sorex_araneus
ENSPCIG00000010642	SF3B1	100	98.772	ENSSPUG00000000410	SF3B1	100	98.772	Sphenodon_punctatus
ENSPCIG00000010642	SF3B1	100	93.313	ENSSPAG00000010451	sf3b1	99	93.313	Stegastes_partitus
ENSPCIG00000010642	SF3B1	91	98.823	ENSSSCG00000016075	SF3B1	100	99.655	Sus_scrofa
ENSPCIG00000010642	SF3B1	100	98.849	ENSTGUG00000010553	SF3B1	100	98.849	Taeniopygia_guttata
ENSPCIG00000010642	SF3B1	100	93.085	ENSTRUG00000015534	sf3b1	100	92.933	Takifugu_rubripes
ENSPCIG00000010642	SF3B1	88	99.793	ENSTBEG00000008714	SF3B1	93	99.793	Tupaia_belangeri
ENSPCIG00000010642	SF3B1	92	94.058	ENSTTRG00000003414	SF3B1	92	94.058	Tursiops_truncatus
ENSPCIG00000010642	SF3B1	94	94.196	ENSUAMG00000018506	SF3B1	99	98.988	Ursus_americanus
ENSPCIG00000010642	SF3B1	100	99.233	ENSUMAG00000020945	SF3B1	100	99.233	Ursus_maritimus
ENSPCIG00000010642	SF3B1	100	91.104	ENSVPAG00000005798	SF3B1	100	91.104	Vicugna_pacos
ENSPCIG00000010642	SF3B1	100	99.233	ENSVVUG00000025948	SF3B1	95	99.233	Vulpes_vulpes
ENSPCIG00000010642	SF3B1	100	96.245	ENSXETG00000013339	sf3b1	100	96.245	Xenopus_tropicalis
ENSPCIG00000010642	SF3B1	100	89.450	ENSXCOG00000018086	sf3b1	100	89.337	Xiphophorus_couchianus
ENSPCIG00000010642	SF3B1	100	92.938	ENSXMAG00000007369	sf3b1	100	93.154	Xiphophorus_maculatus