EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000010985 (Gene tree)
Gene ID: 110196871
Gene Symbol: SBNO1
Alias: -
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 35983 bases
Position: chrFUWB01000527.1:379980-415962
Accession: 110196871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000014056	ResIII	PF04851.15	8.4e-08	1	1
ENSPCIP00000014050	ResIII	PF04851.15	8.8e-08	1	1
ENSPCIP00000014053	ResIII	PF04851.15	8.8e-08	1	1
ENSPCIP00000014045	ResIII	PF04851.15	9.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000017344	SBNO1-201	4254	-	ENSPCIP00000014045	1417 (aa)	-	-
ENSPCIT00000017352	SBNO1-203	5515	-	ENSPCIP00000014053	1392 (aa)	XP_020825973	UPI000A282C6A
ENSPCIT00000017349	SBNO1-202	4182	-	ENSPCIP00000014050	1393 (aa)	-	-
ENSPCIT00000017355	SBNO1-204	5410	-	ENSPCIP00000014056	1357 (aa)	XP_020825975	UPI000A282685

Gene Model

Click here to download ENSPCIG00000010985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000010985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000010985	SBNO1	71	67.347	ENSPCIG00000011264	SBNO2	69	67.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000010985	SBNO1	99	94.329	ENSG00000139697	SBNO1	99	94.113	Homo_sapiens
ENSPCIG00000010985	SBNO1	84	80.637	ENSAPOG00000003196	sbno1	98	80.620	Acanthochromis_polyacanthus
ENSPCIG00000010985	SBNO1	99	94.198	ENSAMEG00000015151	SBNO1	99	94.054	Ailuropoda_melanoleuca
ENSPCIG00000010985	SBNO1	99	76.245	ENSACIG00000008088	sbno1	99	75.323	Amphilophus_citrinellus
ENSPCIG00000010985	SBNO1	99	74.912	ENSAOCG00000014859	sbno1	99	75.000	Amphiprion_ocellaris
ENSPCIG00000010985	SBNO1	99	74.912	ENSAPEG00000006069	sbno1	99	75.000	Amphiprion_percula
ENSPCIG00000010985	SBNO1	99	75.910	ENSATEG00000006667	sbno1	99	75.823	Anabas_testudineus
ENSPCIG00000010985	SBNO1	99	93.391	ENSAPLG00000015674	SBNO1	99	93.175	Anas_platyrhynchos
ENSPCIG00000010985	SBNO1	99	90.889	ENSACAG00000015441	SBNO1	88	90.445	Anolis_carolinensis
ENSPCIG00000010985	SBNO1	99	94.183	ENSANAG00000029958	-	99	93.826	Aotus_nancymaae
ENSPCIG00000010985	SBNO1	99	75.806	ENSACLG00000024913	sbno1	99	76.173	Astatotilapia_calliptera
ENSPCIG00000010985	SBNO1	99	78.947	ENSAMXG00000019473	sbno1	99	78.577	Astyanax_mexicanus
ENSPCIG00000010985	SBNO1	99	94.257	ENSBTAG00000020505	SBNO1	99	94.042	Bos_taurus
ENSPCIG00000010985	SBNO1	99	94.401	ENSCJAG00000016599	SBNO1	99	94.185	Callithrix_jacchus
ENSPCIG00000010985	SBNO1	99	94.480	ENSCAFG00000007503	SBNO1	99	94.501	Canis_familiaris
ENSPCIG00000010985	SBNO1	99	93.754	ENSCAFG00020015363	SBNO1	99	94.565	Canis_lupus_dingo
ENSPCIG00000010985	SBNO1	99	94.329	ENSCHIG00000008382	SBNO1	99	96.014	Capra_hircus
ENSPCIG00000010985	SBNO1	99	94.624	ENSTSYG00000012749	SBNO1	99	94.624	Carlito_syrichta
ENSPCIG00000010985	SBNO1	97	93.958	ENSCAPG00000000384	SBNO1	99	96.739	Cavia_aperea
ENSPCIG00000010985	SBNO1	99	93.683	ENSCPOG00000008109	SBNO1	99	96.739	Cavia_porcellus
ENSPCIG00000010985	SBNO1	99	90.213	ENSCCAG00000035316	SBNO1	99	91.518	Cebus_capucinus
ENSPCIG00000010985	SBNO1	98	94.197	ENSCATG00000008239	SBNO1	98	97.101	Cercocebus_atys
ENSPCIG00000010985	SBNO1	99	93.898	ENSCLAG00000008995	SBNO1	99	96.920	Chinchilla_lanigera
ENSPCIG00000010985	SBNO1	85	96.456	ENSCSAG00000002064	SBNO1	99	96.456	Chlorocebus_sabaeus
ENSPCIG00000010985	SBNO1	96	91.066	ENSCHOG00000008814	SBNO1	96	90.394	Choloepus_hoffmanni
ENSPCIG00000010985	SBNO1	99	93.368	ENSCPBG00000025968	SBNO1	99	92.960	Chrysemys_picta_bellii
ENSPCIG00000010985	SBNO1	99	89.391	ENSCANG00000042688	-	99	89.319	Colobus_angolensis_palliatus
ENSPCIG00000010985	SBNO1	99	93.970	ENSCGRG00001017470	Sbno1	99	96.196	Cricetulus_griseus_chok1gshd
ENSPCIG00000010985	SBNO1	99	93.970	ENSCGRG00000004756	Sbno1	99	96.196	Cricetulus_griseus_crigri
ENSPCIG00000010985	SBNO1	99	74.420	ENSCSEG00000011919	sbno1	99	74.982	Cynoglossus_semilaevis
ENSPCIG00000010985	SBNO1	99	75.371	ENSCVAG00000007038	sbno1	99	75.282	Cyprinodon_variegatus
ENSPCIG00000010985	SBNO1	99	79.000	ENSDARG00000099080	sbno1	99	79.429	Danio_rerio
ENSPCIG00000010985	SBNO1	99	92.937	ENSDNOG00000017147	SBNO1	98	94.142	Dasypus_novemcinctus
ENSPCIG00000010985	SBNO1	99	82.098	ENSDORG00000015261	Sbno1	99	94.319	Dipodomys_ordii
ENSPCIG00000010985	SBNO1	93	87.736	ENSETEG00000005620	SBNO1	93	87.736	Echinops_telfairi
ENSPCIG00000010985	SBNO1	74	64.162	ENSEBUG00000013823	sbno1	93	62.822	Eptatretus_burgeri
ENSPCIG00000010985	SBNO1	50	96.148	ENSEASG00005012595	-	92	96.148	Equus_asinus_asinus
ENSPCIG00000010985	SBNO1	99	94.760	ENSECAG00000006127	SBNO1	99	94.811	Equus_caballus
ENSPCIG00000010985	SBNO1	83	95.604	ENSEEUG00000003793	SBNO1	83	95.604	Erinaceus_europaeus
ENSPCIG00000010985	SBNO1	99	77.857	ENSELUG00000002886	sbno1	99	78.156	Esox_lucius
ENSPCIG00000010985	SBNO1	100	94.620	ENSFCAG00000015331	SBNO1	100	94.405	Felis_catus
ENSPCIG00000010985	SBNO1	99	93.319	ENSFALG00000009273	SBNO1	99	93.103	Ficedula_albicollis
ENSPCIG00000010985	SBNO1	99	92.103	ENSFDAG00000014232	SBNO1	99	92.572	Fukomys_damarensis
ENSPCIG00000010985	SBNO1	99	75.472	ENSFHEG00000007360	sbno1	99	75.399	Fundulus_heteroclitus
ENSPCIG00000010985	SBNO1	97	77.702	ENSGMOG00000018229	sbno1	99	78.610	Gadus_morhua
ENSPCIG00000010985	SBNO1	88	93.501	ENSGALG00000003392	SBNO1	99	93.258	Gallus_gallus
ENSPCIG00000010985	SBNO1	99	77.210	ENSGAFG00000003960	sbno1	99	77.080	Gambusia_affinis
ENSPCIG00000010985	SBNO1	96	78.653	ENSGACG00000015633	sbno1	99	78.522	Gasterosteus_aculeatus
ENSPCIG00000010985	SBNO1	99	92.478	ENSGAGG00000001065	SBNO1	99	92.056	Gopherus_agassizii
ENSPCIG00000010985	SBNO1	99	94.551	ENSGGOG00000015000	SBNO1	99	97.101	Gorilla_gorilla
ENSPCIG00000010985	SBNO1	99	70.154	ENSHBUG00000011910	sbno1	99	70.519	Haplochromis_burtoni
ENSPCIG00000010985	SBNO1	99	93.611	ENSHGLG00000014165	-	99	93.539	Heterocephalus_glaber_female
ENSPCIG00000010985	SBNO1	92	83.591	ENSHCOG00000003246	sbno1	95	85.375	Hippocampus_comes
ENSPCIG00000010985	SBNO1	99	78.962	ENSIPUG00000015830	Sbno1	98	79.071	Ictalurus_punctatus
ENSPCIG00000010985	SBNO1	99	94.698	ENSSTOG00000023221	SBNO1	99	96.739	Ictidomys_tridecemlineatus
ENSPCIG00000010985	SBNO1	99	94.401	ENSJJAG00000001741	Sbno1	99	93.898	Jaculus_jaculus
ENSPCIG00000010985	SBNO1	99	76.603	ENSKMAG00000009696	sbno1	99	76.406	Kryptolebias_marmoratus
ENSPCIG00000010985	SBNO1	99	75.403	ENSLBEG00000007623	sbno1	99	75.543	Labrus_bergylta
ENSPCIG00000010985	SBNO1	99	81.714	ENSLACG00000017227	SBNO1	99	83.981	Latimeria_chalumnae
ENSPCIG00000010985	SBNO1	99	81.960	ENSLOCG00000005725	sbno1	97	82.173	Lepisosteus_oculatus
ENSPCIG00000010985	SBNO1	99	93.683	ENSLAFG00000002135	SBNO1	99	93.410	Loxodonta_africana
ENSPCIG00000010985	SBNO1	99	94.831	ENSMFAG00000031429	SBNO1	99	94.329	Macaca_fascicularis
ENSPCIG00000010985	SBNO1	99	94.831	ENSMMUG00000011496	SBNO1	99	94.329	Macaca_mulatta
ENSPCIG00000010985	SBNO1	99	92.931	ENSMLEG00000033260	SBNO1	99	97.101	Mandrillus_leucophaeus
ENSPCIG00000010985	SBNO1	99	76.006	ENSMAMG00000005473	sbno1	99	75.865	Mastacembelus_armatus
ENSPCIG00000010985	SBNO1	99	93.463	ENSMGAG00000003274	SBNO1	99	93.391	Meleagris_gallopavo
ENSPCIG00000010985	SBNO1	50	89.429	ENSMAUG00000004834	-	100	94.286	Mesocricetus_auratus
ENSPCIG00000010985	SBNO1	99	93.611	ENSMICG00000006573	-	98	95.040	Microcebus_murinus
ENSPCIG00000010985	SBNO1	95	96.043	ENSMOCG00000009390	Sbno1	99	96.558	Microtus_ochrogaster
ENSPCIG00000010985	SBNO1	99	73.391	ENSMMOG00000008691	sbno1	99	72.938	Mola_mola
ENSPCIG00000010985	SBNO1	100	99.210	ENSMODG00000012470	SBNO1	99	99.210	Monodelphis_domestica
ENSPCIG00000010985	SBNO1	99	74.860	ENSMALG00000001056	sbno1	99	74.650	Monopterus_albus
ENSPCIG00000010985	SBNO1	100	93.687	MGP_CAROLIEiJ_G0027749	Sbno1	100	94.436	Mus_caroli
ENSPCIG00000010985	SBNO1	100	93.687	ENSMUSG00000038095	Sbno1	100	94.436	Mus_musculus
ENSPCIG00000010985	SBNO1	100	94.329	MGP_PahariEiJ_G0024329	Sbno1	100	94.135	Mus_pahari
ENSPCIG00000010985	SBNO1	100	93.472	MGP_SPRETEiJ_G0028747	Sbno1	100	94.436	Mus_spretus
ENSPCIG00000010985	SBNO1	99	94.472	ENSMPUG00000001658	SBNO1	99	94.257	Mustela_putorius_furo
ENSPCIG00000010985	SBNO1	99	93.970	ENSMLUG00000017159	SBNO1	99	93.754	Myotis_lucifugus
ENSPCIG00000010985	SBNO1	99	94.472	ENSNGAG00000012620	Sbno1	98	97.041	Nannospalax_galili
ENSPCIG00000010985	SBNO1	99	75.604	ENSNBRG00000019189	sbno1	99	75.971	Neolamprologus_brichardi
ENSPCIG00000010985	SBNO1	99	90.883	ENSNLEG00000001502	SBNO1	99	91.382	Nomascus_leucogenys
ENSPCIG00000010985	SBNO1	62	98.077	ENSMEUG00000008768	-	93	98.077	Notamacropus_eugenii
ENSPCIG00000010985	SBNO1	99	91.111	ENSOPRG00000011054	SBNO1	99	91.039	Ochotona_princeps
ENSPCIG00000010985	SBNO1	99	93.826	ENSODEG00000009997	SBNO1	99	96.558	Octodon_degus
ENSPCIG00000010985	SBNO1	99	75.334	ENSONIG00000015348	sbno1	99	75.387	Oreochromis_niloticus
ENSPCIG00000010985	SBNO1	98	93.003	ENSOCUG00000002441	SBNO1	95	92.857	Oryctolagus_cuniculus
ENSPCIG00000010985	SBNO1	99	74.859	ENSORLG00000001593	sbno1	99	74.818	Oryzias_latipes
ENSPCIG00000010985	SBNO1	99	74.982	ENSORLG00020015216	sbno1	99	74.841	Oryzias_latipes_hni
ENSPCIG00000010985	SBNO1	99	74.982	ENSORLG00015002726	sbno1	99	74.841	Oryzias_latipes_hsok
ENSPCIG00000010985	SBNO1	99	75.285	ENSOMEG00000019313	sbno1	99	75.018	Oryzias_melastigma
ENSPCIG00000010985	SBNO1	50	86.857	ENSOGAG00000010781	-	100	91.429	Otolemur_garnettii
ENSPCIG00000010985	SBNO1	99	94.122	ENSOARG00000004404	SBNO1	99	93.907	Ovis_aries
ENSPCIG00000010985	SBNO1	99	94.330	ENSPPAG00000024635	SBNO1	99	96.920	Pan_paniscus
ENSPCIG00000010985	SBNO1	100	94.620	ENSPPRG00000022092	SBNO1	100	94.405	Panthera_pardus
ENSPCIG00000010985	SBNO1	99	94.042	ENSPTIG00000017803	SBNO1	99	94.042	Panthera_tigris_altaica
ENSPCIG00000010985	SBNO1	99	94.404	ENSPTRG00000005597	SBNO1	99	97.101	Pan_troglodytes
ENSPCIG00000010985	SBNO1	99	94.624	ENSPANG00000011640	SBNO1	99	97.101	Papio_anubis
ENSPCIG00000010985	SBNO1	99	80.415	ENSPKIG00000001441	sbno1	99	80.186	Paramormyrops_kingsleyae
ENSPCIG00000010985	SBNO1	99	92.931	ENSPSIG00000009572	-	99	92.410	Pelodiscus_sinensis
ENSPCIG00000010985	SBNO1	92	88.673	ENSPSIG00000009256	-	100	88.354	Pelodiscus_sinensis
ENSPCIG00000010985	SBNO1	99	93.539	ENSPEMG00000016087	Sbno1	99	96.196	Peromyscus_maniculatus_bairdii
ENSPCIG00000010985	SBNO1	99	76.217	ENSPFOG00000005069	sbno1	99	76.093	Poecilia_formosa
ENSPCIG00000010985	SBNO1	99	76.006	ENSPLAG00000015015	sbno1	99	76.359	Poecilia_latipinna
ENSPCIG00000010985	SBNO1	99	76.234	ENSPMEG00000021212	sbno1	99	76.110	Poecilia_mexicana
ENSPCIG00000010985	SBNO1	99	75.952	ENSPREG00000017746	sbno1	99	75.828	Poecilia_reticulata
ENSPCIG00000010985	SBNO1	99	94.472	ENSPPYG00000005084	SBNO1	99	94.185	Pongo_abelii
ENSPCIG00000010985	SBNO1	89	89.877	ENSPCAG00000008634	SBNO1	88	89.560	Procavia_capensis
ENSPCIG00000010985	SBNO1	99	94.831	ENSPCOG00000024277	SBNO1	99	96.721	Propithecus_coquereli
ENSPCIG00000010985	SBNO1	87	96.223	ENSPVAG00000015304	SBNO1	87	96.223	Pteropus_vampyrus
ENSPCIG00000010985	SBNO1	99	75.510	ENSPNYG00000004291	sbno1	99	75.423	Pundamilia_nyererei
ENSPCIG00000010985	SBNO1	99	78.450	ENSPNAG00000015622	sbno1	99	78.521	Pygocentrus_nattereri
ENSPCIG00000010985	SBNO1	100	93.687	ENSRNOG00000001064	Sbno1	99	96.564	Rattus_norvegicus
ENSPCIG00000010985	SBNO1	99	94.698	ENSRROG00000034230	SBNO1	99	97.101	Rhinopithecus_roxellana
ENSPCIG00000010985	SBNO1	97	88.746	ENSSBOG00000015422	SBNO1	99	89.129	Saimiri_boliviensis_boliviensis
ENSPCIG00000010985	SBNO1	99	80.264	ENSSFOG00015019025	sbno1	99	80.572	Scleropages_formosus
ENSPCIG00000010985	SBNO1	99	75.582	ENSSMAG00000013640	sbno1	99	75.636	Scophthalmus_maximus
ENSPCIG00000010985	SBNO1	99	75.509	ENSSDUG00000023480	sbno1	99	75.228	Seriola_dumerili
ENSPCIG00000010985	SBNO1	99	75.439	ENSSLDG00000007928	sbno1	99	75.158	Seriola_lalandi_dorsalis
ENSPCIG00000010985	SBNO1	89	94.489	ENSSARG00000002594	SBNO1	89	94.327	Sorex_araneus
ENSPCIG00000010985	SBNO1	99	92.330	ENSSPUG00000012640	SBNO1	99	91.888	Sphenodon_punctatus
ENSPCIG00000010985	SBNO1	99	75.017	ENSSPAG00000016244	sbno1	99	74.808	Stegastes_partitus
ENSPCIG00000010985	SBNO1	99	94.919	ENSSSCG00000009776	SBNO1	99	94.760	Sus_scrofa
ENSPCIG00000010985	SBNO1	99	93.175	ENSTGUG00000005380	SBNO1	99	92.960	Taeniopygia_guttata
ENSPCIG00000010985	SBNO1	99	76.596	ENSTRUG00000018490	sbno1	100	76.044	Takifugu_rubripes
ENSPCIG00000010985	SBNO1	56	70.334	ENSTNIG00000013506	sbno1	99	69.614	Tetraodon_nigroviridis
ENSPCIG00000010985	SBNO1	99	94.544	ENSUAMG00000019671	SBNO1	99	94.329	Ursus_americanus
ENSPCIG00000010985	SBNO1	99	94.544	ENSUMAG00000004002	SBNO1	99	94.329	Ursus_maritimus
ENSPCIG00000010985	SBNO1	95	89.314	ENSVPAG00000007024	SBNO1	95	89.080	Vicugna_pacos
ENSPCIG00000010985	SBNO1	99	94.616	ENSVVUG00000027807	SBNO1	99	94.472	Vulpes_vulpes
ENSPCIG00000010985	SBNO1	100	82.504	ENSXETG00000031930	SBNO1	100	82.303	Xenopus_tropicalis
ENSPCIG00000010985	SBNO1	89	74.461	ENSXCOG00000011607	sbno1	95	75.303	Xiphophorus_couchianus
ENSPCIG00000010985	SBNO1	99	76.518	ENSXMAG00000002140	sbno1	99	76.518	Xiphophorus_maculatus