EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000012106 (Gene tree)
Gene ID: 110214474
Gene Symbol: TNRC6A
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 59543 bases
Position: chrFUWB01001560.1:260969-320511
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000015591	Ago_hook	PF10427.9	1.4e-14	1	1
ENSPCIP00000015589	Ago_hook	PF10427.9	1.4e-14	1	1
ENSPCIP00000015587	Ago_hook	PF10427.9	1.5e-14	1	1
ENSPCIP00000015593	Ago_hook	PF10427.9	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000019268	TNRC6A-204	6917	-	ENSPCIP00000015593	1777 (aa)	-	-
ENSPCIT00000019262	TNRC6A-201	7241	-	ENSPCIP00000015587	1885 (aa)	-	-
ENSPCIT00000019264	TNRC6A-202	7193	-	ENSPCIP00000015589	1869 (aa)	-	-
ENSPCIT00000019266	TNRC6A-203	7094	-	ENSPCIP00000015591	1836 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000012106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000012106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000012106	TNRC6A	50	39.634	ENSPCIG00000017421	-	95	40.447
ENSPCIG00000012106	TNRC6A	68	40.990	ENSPCIG00000020347	TNRC6B	99	37.850

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000012106	TNRC6A	100	83.708	ENSG00000090905	TNRC6A	100	93.750	Homo_sapiens
ENSPCIG00000012106	TNRC6A	100	84.004	ENSAMEG00000009333	TNRC6A	99	83.743	Ailuropoda_melanoleuca
ENSPCIG00000012106	TNRC6A	99	87.228	ENSAPLG00000009978	TNRC6A	100	87.122	Anas_platyrhynchos
ENSPCIG00000012106	TNRC6A	98	56.433	ENSACAG00000011857	TNRC6A	97	57.310	Anolis_carolinensis
ENSPCIG00000012106	TNRC6A	100	83.560	ENSANAG00000025252	TNRC6A	98	83.403	Aotus_nancymaae
ENSPCIG00000012106	TNRC6A	94	59.520	ENSAMXG00000019919	tnrc6a	100	59.429	Astyanax_mexicanus
ENSPCIG00000012106	TNRC6A	99	83.666	ENSBTAG00000017999	TNRC6A	99	83.666	Bos_taurus
ENSPCIG00000012106	TNRC6A	100	83.134	ENSCJAG00000020677	TNRC6A	97	83.186	Callithrix_jacchus
ENSPCIG00000012106	TNRC6A	100	84.257	ENSCAFG00000017531	TNRC6A	99	83.076	Canis_familiaris
ENSPCIG00000012106	TNRC6A	100	83.159	ENSCAFG00020021160	TNRC6A	99	82.848	Canis_lupus_dingo
ENSPCIG00000012106	TNRC6A	100	82.648	ENSCHIG00000019448	TNRC6A	97	84.951	Capra_hircus
ENSPCIG00000012106	TNRC6A	100	83.255	ENSTSYG00000012711	TNRC6A	99	83.246	Carlito_syrichta
ENSPCIG00000012106	TNRC6A	100	82.976	ENSCPOG00000036684	TNRC6A	97	82.762	Cavia_porcellus
ENSPCIG00000012106	TNRC6A	100	83.577	ENSCCAG00000033664	TNRC6A	99	83.403	Cebus_capucinus
ENSPCIG00000012106	TNRC6A	100	82.689	ENSCATG00000019284	TNRC6A	98	82.689	Cercocebus_atys
ENSPCIG00000012106	TNRC6A	100	79.020	ENSCLAG00000010217	TNRC6A	97	78.914	Chinchilla_lanigera
ENSPCIG00000012106	TNRC6A	100	83.847	ENSCSAG00000006561	TNRC6A	97	83.638	Chlorocebus_sabaeus
ENSPCIG00000012106	TNRC6A	95	82.721	ENSCHOG00000009374	TNRC6A	92	82.653	Choloepus_hoffmanni
ENSPCIG00000012106	TNRC6A	94	87.355	ENSCPBG00000001881	TNRC6A	100	87.297	Chrysemys_picta_bellii
ENSPCIG00000012106	TNRC6A	100	83.987	ENSCANG00000041549	TNRC6A	97	83.778	Colobus_angolensis_palliatus
ENSPCIG00000012106	TNRC6A	100	82.686	ENSCGRG00001015021	Tnrc6a	99	82.581	Cricetulus_griseus_chok1gshd
ENSPCIG00000012106	TNRC6A	99	81.260	ENSCGRG00000013351	Tnrc6a	97	81.153	Cricetulus_griseus_crigri
ENSPCIG00000012106	TNRC6A	94	60.168	ENSDARG00000079688	tnrc6a	100	60.392	Danio_rerio
ENSPCIG00000012106	TNRC6A	100	82.956	ENSDNOG00000013989	TNRC6A	99	82.746	Dasypus_novemcinctus
ENSPCIG00000012106	TNRC6A	100	75.578	ENSETEG00000014658	TNRC6A	99	75.578	Echinops_telfairi
ENSPCIG00000012106	TNRC6A	100	83.675	ENSEASG00005017693	TNRC6A	99	83.727	Equus_asinus_asinus
ENSPCIG00000012106	TNRC6A	100	84.161	ENSECAG00000025056	TNRC6A	99	83.727	Equus_caballus
ENSPCIG00000012106	TNRC6A	100	77.818	ENSEEUG00000004530	TNRC6A	99	77.766	Erinaceus_europaeus
ENSPCIG00000012106	TNRC6A	100	83.922	ENSFCAG00000025236	TNRC6A	99	83.281	Felis_catus
ENSPCIG00000012106	TNRC6A	100	85.571	ENSFALG00000003757	TNRC6A	97	85.307	Ficedula_albicollis
ENSPCIG00000012106	TNRC6A	94	88.651	ENSGALG00000006068	TNRC6A	100	88.419	Gallus_gallus
ENSPCIG00000012106	TNRC6A	94	86.886	ENSGAGG00000023209	TNRC6A	100	86.828	Gopherus_agassizii
ENSPCIG00000012106	TNRC6A	100	83.603	ENSGGOG00000005137	TNRC6A	99	83.481	Gorilla_gorilla
ENSPCIG00000012106	TNRC6A	99	81.575	ENSHGLG00000012474	-	97	81.307	Heterocephalus_glaber_female
ENSPCIG00000012106	TNRC6A	97	65.338	ENSHGLG00000007368	-	93	64.931	Heterocephalus_glaber_female
ENSPCIG00000012106	TNRC6A	99	82.296	ENSHGLG00100012496	-	97	82.079	Heterocephalus_glaber_male
ENSPCIG00000012106	TNRC6A	100	83.377	ENSSTOG00000023394	TNRC6A	96	83.325	Ictidomys_tridecemlineatus
ENSPCIG00000012106	TNRC6A	99	73.704	ENSLACG00000006277	TNRC6A	100	73.913	Latimeria_chalumnae
ENSPCIG00000012106	TNRC6A	99	84.989	ENSLOCG00000005517	tnrc6a	90	84.989	Lepisosteus_oculatus
ENSPCIG00000012106	TNRC6A	100	82.869	ENSLAFG00000004209	TNRC6A	99	82.762	Loxodonta_africana
ENSPCIG00000012106	TNRC6A	99	82.667	ENSMFAG00000003824	TNRC6A	99	82.719	Macaca_fascicularis
ENSPCIG00000012106	TNRC6A	100	84.040	ENSMMUG00000020428	TNRC6A	97	83.778	Macaca_mulatta
ENSPCIG00000012106	TNRC6A	100	83.602	ENSMNEG00000034854	TNRC6A	99	82.503	Macaca_nemestrina
ENSPCIG00000012106	TNRC6A	100	82.316	ENSMLEG00000042737	TNRC6A	97	82.110	Mandrillus_leucophaeus
ENSPCIG00000012106	TNRC6A	98	86.298	ENSMGAG00000006455	TNRC6A	93	87.107	Meleagris_gallopavo
ENSPCIG00000012106	TNRC6A	100	81.969	ENSMAUG00000012750	Tnrc6a	97	81.862	Mesocricetus_auratus
ENSPCIG00000012106	TNRC6A	100	84.073	ENSMICG00000030685	TNRC6A	99	83.760	Microcebus_murinus
ENSPCIG00000012106	TNRC6A	100	82.592	ENSMOCG00000000152	Tnrc6a	97	82.325	Microtus_ochrogaster
ENSPCIG00000012106	TNRC6A	100	96.285	ENSMODG00000016348	TNRC6A	96	96.285	Monodelphis_domestica
ENSPCIG00000012106	TNRC6A	100	81.267	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	85.653	Mus_caroli
ENSPCIG00000012106	TNRC6A	100	81.575	ENSMUSG00000052707	Tnrc6a	99	86.010	Mus_musculus
ENSPCIG00000012106	TNRC6A	100	81.585	MGP_PahariEiJ_G0013635	Tnrc6a	100	86.081	Mus_pahari
ENSPCIG00000012106	TNRC6A	100	82.297	MGP_SPRETEiJ_G0031539	Tnrc6a	100	85.582	Mus_spretus
ENSPCIG00000012106	TNRC6A	99	75.922	ENSMPUG00000012324	TNRC6A	100	75.434	Mustela_putorius_furo
ENSPCIG00000012106	TNRC6A	99	81.799	ENSMLUG00000002701	TNRC6A	100	81.589	Myotis_lucifugus
ENSPCIG00000012106	TNRC6A	100	82.479	ENSNGAG00000020702	Tnrc6a	97	82.265	Nannospalax_galili
ENSPCIG00000012106	TNRC6A	100	81.726	ENSNLEG00000011851	TNRC6A	98	81.406	Nomascus_leucogenys
ENSPCIG00000012106	TNRC6A	78	93.810	ENSMEUG00000015959	-	74	95.681	Notamacropus_eugenii
ENSPCIG00000012106	TNRC6A	96	93.657	ENSOPRG00000005819	TNRC6A	93	93.657	Ochotona_princeps
ENSPCIG00000012106	TNRC6A	99	78.614	ENSODEG00000012802	TNRC6A	97	78.882	Octodon_degus
ENSPCIG00000012106	TNRC6A	91	87.682	ENSOANG00000007672	TNRC6A	100	87.566	Ornithorhynchus_anatinus
ENSPCIG00000012106	TNRC6A	99	82.759	ENSOCUG00000004325	TNRC6A	100	82.493	Oryctolagus_cuniculus
ENSPCIG00000012106	TNRC6A	100	84.216	ENSOGAG00000006666	TNRC6A	98	84.006	Otolemur_garnettii
ENSPCIG00000012106	TNRC6A	99	83.141	ENSOARG00000017950	TNRC6A	98	85.357	Ovis_aries
ENSPCIG00000012106	TNRC6A	100	83.490	ENSPPAG00000028379	TNRC6A	99	83.368	Pan_paniscus
ENSPCIG00000012106	TNRC6A	100	83.491	ENSPPRG00000005861	TNRC6A	97	83.333	Panthera_pardus
ENSPCIG00000012106	TNRC6A	100	82.985	ENSPTIG00000006346	TNRC6A	97	82.881	Panthera_tigris_altaica
ENSPCIG00000012106	TNRC6A	99	83.585	ENSPTRG00000007898	TNRC6A	99	83.377	Pan_troglodytes
ENSPCIG00000012106	TNRC6A	100	81.283	ENSPANG00000018523	TNRC6A	99	80.395	Papio_anubis
ENSPCIG00000012106	TNRC6A	90	78.713	ENSPKIG00000012859	tnrc6a	99	80.000	Paramormyrops_kingsleyae
ENSPCIG00000012106	TNRC6A	79	81.118	ENSPSIG00000003965	TNRC6A	100	81.050	Pelodiscus_sinensis
ENSPCIG00000012106	TNRC6A	100	82.129	ENSPEMG00000016318	Tnrc6a	97	81.896	Peromyscus_maniculatus_bairdii
ENSPCIG00000012106	TNRC6A	100	83.359	ENSPPYG00000007202	TNRC6A	97	82.890	Pongo_abelii
ENSPCIG00000012106	TNRC6A	95	88.660	ENSPCAG00000008260	TNRC6A	92	88.660	Procavia_capensis
ENSPCIG00000012106	TNRC6A	100	81.505	ENSPCOG00000010134	TNRC6A	97	81.243	Propithecus_coquereli
ENSPCIG00000012106	TNRC6A	89	64.028	ENSPVAG00000012066	TNRC6A	97	64.383	Pteropus_vampyrus
ENSPCIG00000012106	TNRC6A	100	80.955	ENSRNOG00000024737	Tnrc6a	98	81.695	Rattus_norvegicus
ENSPCIG00000012106	TNRC6A	100	83.883	ENSRBIG00000014222	TNRC6A	99	83.673	Rhinopithecus_bieti
ENSPCIG00000012106	TNRC6A	100	84.111	ENSRROG00000032360	TNRC6A	97	83.901	Rhinopithecus_roxellana
ENSPCIG00000012106	TNRC6A	100	84.444	ENSSBOG00000036197	TNRC6A	100	86.604	Saimiri_boliviensis_boliviensis
ENSPCIG00000012106	TNRC6A	94	96.848	ENSSHAG00000008811	TNRC6A	100	96.848	Sarcophilus_harrisii
ENSPCIG00000012106	TNRC6A	94	62.013	ENSSFOG00015008920	tnrc6a	100	63.462	Scleropages_formosus
ENSPCIG00000012106	TNRC6A	73	75.725	ENSSARG00000002479	TNRC6A	88	75.362	Sorex_araneus
ENSPCIG00000012106	TNRC6A	94	82.326	ENSSPUG00000010525	TNRC6A	100	82.383	Sphenodon_punctatus
ENSPCIG00000012106	TNRC6A	100	83.404	ENSSSCG00000038870	TNRC6A	100	86.667	Sus_scrofa
ENSPCIG00000012106	TNRC6A	99	84.063	ENSTGUG00000006142	TNRC6A	97	83.793	Taeniopygia_guttata
ENSPCIG00000012106	TNRC6A	100	80.930	ENSTBEG00000014965	TNRC6A	99	80.773	Tupaia_belangeri
ENSPCIG00000012106	TNRC6A	93	90.497	ENSTTRG00000002008	TNRC6A	90	90.497	Tursiops_truncatus
ENSPCIG00000012106	TNRC6A	81	80.924	ENSUAMG00000006656	-	93	80.858	Ursus_americanus
ENSPCIG00000012106	TNRC6A	99	84.308	ENSUMAG00000008274	TNRC6A	100	86.933	Ursus_maritimus
ENSPCIG00000012106	TNRC6A	56	78.405	ENSVPAG00000010764	-	55	78.405	Vicugna_pacos
ENSPCIG00000012106	TNRC6A	95	93.514	ENSVVUG00000005380	TNRC6A	99	84.324	Vulpes_vulpes
ENSPCIG00000012106	TNRC6A	98	68.323	ENSXETG00000030437	TNRC6A	99	68.844	Xenopus_tropicalis