EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000012220 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 16422 bases
Position: chrFUWB01000908.1:359267-375688
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000015737	Ribonuc_L-PSP	PF01042.21	5.4e-37	1	1
ENSPCIP00000015739	Ribonuc_L-PSP	PF01042.21	2.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000019464	-	1497	-	ENSPCIP00000015739	123 (aa)	-	-
ENSPCIT00000019462	-	1566	-	ENSPCIP00000015737	146 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000012220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000012220's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000012220	-	87	69.291	ENSPCIG00000012218	RIDA	94	69.291

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000012220	-	77	56.250	ENSCAFG00020002799	-	85	56.250	Canis_lupus_dingo
ENSPCIG00000012220	-	90	43.939	ENSEEUG00000014805	-	97	43.939	Erinaceus_europaeus
ENSPCIG00000012220	-	88	39.815	ENSJJAG00000020177	-	73	68.966	Jaculus_jaculus
ENSPCIG00000012220	-	88	53.125	ENSPPRG00000006722	-	93	53.125	Panthera_pardus
ENSPCIG00000012220	-	88	53.125	ENSPTIG00000006655	-	93	53.125	Panthera_tigris_altaica
ENSPCIG00000012220	-	76	45.946	ENSSSCG00000037667	-	80	45.946	Sus_scrofa