EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000012963 (Gene tree)
Gene ID: 110217345
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 40066 bases
Position: chrFUWB01005544.1:45568-85633
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000016892	PRP4	PF08799.11	6.1e-13	1	1
ENSPCIP00000016891	PRP4	PF08799.11	6.3e-13	1	1
ENSPCIP00000016892	Prp18	PF02840.15	2e-55	1	1
ENSPCIP00000016891	Prp18	PF02840.15	2.2e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000020843	-	1832	-	ENSPCIP00000016891	329 (aa)	-	-
ENSPCIT00000020844	-	1805	-	ENSPCIP00000016892	320 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000012963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000012963's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000012963	-	99	96.835	ENSG00000165630	PRPF18	98	97.531	Homo_sapiens
ENSPCIG00000012963	-	99	84.494	ENSAPOG00000024177	prpf18	92	84.494	Acanthochromis_polyacanthus
ENSPCIG00000012963	-	99	96.203	ENSAMEG00000013591	-	92	96.203	Ailuropoda_melanoleuca
ENSPCIG00000012963	-	99	83.861	ENSACIG00000001186	prpf18	92	83.861	Amphilophus_citrinellus
ENSPCIG00000012963	-	99	84.494	ENSAOCG00000006572	prpf18	89	82.769	Amphiprion_ocellaris
ENSPCIG00000012963	-	99	84.494	ENSAPEG00000004564	prpf18	92	84.494	Amphiprion_percula
ENSPCIG00000012963	-	99	82.911	ENSATEG00000000303	prpf18	92	82.911	Anabas_testudineus
ENSPCIG00000012963	-	98	92.357	ENSAPLG00000003387	-	92	92.357	Anas_platyrhynchos
ENSPCIG00000012963	-	99	91.509	ENSACAG00000000818	-	93	90.826	Anolis_carolinensis
ENSPCIG00000012963	-	99	96.203	ENSANAG00000037445	-	97	96.000	Aotus_nancymaae
ENSPCIG00000012963	-	99	83.281	ENSACLG00000026296	prpf18	95	83.281	Astatotilapia_calliptera
ENSPCIG00000012963	-	99	85.535	ENSAMXG00000012848	prpf18	93	83.692	Astyanax_mexicanus
ENSPCIG00000012963	-	99	95.886	ENSBTAG00000017244	PRPF18	93	95.692	Bos_taurus
ENSPCIG00000012963	-	98	34.663	WBGene00009320	F32B6.3	91	34.663	Caenorhabditis_elegans
ENSPCIG00000012963	-	99	96.203	ENSCJAG00000009432	-	95	96.012	Callithrix_jacchus
ENSPCIG00000012963	-	99	96.203	ENSCAFG00000004735	-	92	96.203	Canis_familiaris
ENSPCIG00000012963	-	99	96.238	ENSCAFG00020007712	-	92	96.238	Canis_lupus_dingo
ENSPCIG00000012963	-	99	95.886	ENSCHIG00000000499	-	93	95.692	Capra_hircus
ENSPCIG00000012963	-	99	95.886	ENSTSYG00000003517	-	93	95.692	Carlito_syrichta
ENSPCIG00000012963	-	99	96.835	ENSCPOG00000021069	-	93	96.308	Cavia_porcellus
ENSPCIG00000012963	-	99	96.203	ENSCCAG00000036822	-	97	96.000	Cebus_capucinus
ENSPCIG00000012963	-	99	85.127	ENSCATG00000016633	-	91	85.127	Cercocebus_atys
ENSPCIG00000012963	-	99	96.203	ENSCLAG00000011770	-	93	95.692	Chinchilla_lanigera
ENSPCIG00000012963	-	99	96.615	ENSCSAG00000013109	-	93	96.615	Chlorocebus_sabaeus
ENSPCIG00000012963	-	99	89.394	ENSCPBG00000003100	-	93	90.000	Chrysemys_picta_bellii
ENSPCIG00000012963	-	98	52.698	ENSCING00000020481	-	90	52.698	Ciona_intestinalis
ENSPCIG00000012963	-	98	52.648	ENSCSAVG00000010546	-	91	52.484	Ciona_savignyi
ENSPCIG00000012963	-	99	96.519	ENSCANG00000034900	-	93	96.308	Colobus_angolensis_palliatus
ENSPCIG00000012963	-	99	96.835	ENSCGRG00001023665	Prpf18	92	96.835	Cricetulus_griseus_chok1gshd
ENSPCIG00000012963	-	99	96.835	ENSCGRG00000014690	Prpf18	92	96.835	Cricetulus_griseus_crigri
ENSPCIG00000012963	-	99	81.329	ENSCSEG00000005536	prpf18	92	81.329	Cynoglossus_semilaevis
ENSPCIG00000012963	-	99	82.911	ENSCVAG00000012401	prpf18	92	82.911	Cyprinodon_variegatus
ENSPCIG00000012963	-	99	83.544	ENSDARG00000058306	prpf18	92	83.544	Danio_rerio
ENSPCIG00000012963	-	99	96.519	ENSDNOG00000035607	-	92	96.519	Dasypus_novemcinctus
ENSPCIG00000012963	-	99	95.886	ENSDORG00000000858	Prpf18	92	95.886	Dipodomys_ordii
ENSPCIG00000012963	-	99	48.734	FBgn0027784	Prp18	91	48.418	Drosophila_melanogaster
ENSPCIG00000012963	-	96	87.338	ENSETEG00000015060	-	90	87.338	Echinops_telfairi
ENSPCIG00000012963	-	99	65.839	ENSEBUG00000016502	prpf18	92	64.798	Eptatretus_burgeri
ENSPCIG00000012963	-	99	96.519	ENSEASG00005019373	-	93	96.308	Equus_asinus_asinus
ENSPCIG00000012963	-	99	96.519	ENSECAG00000006997	PRPF18	93	96.308	Equus_caballus
ENSPCIG00000012963	-	99	60.759	ENSEEUG00000001171	-	100	60.759	Erinaceus_europaeus
ENSPCIG00000012963	-	99	82.019	ENSELUG00000022190	prpf18	92	82.019	Esox_lucius
ENSPCIG00000012963	-	99	95.886	ENSFCAG00000004436	-	93	95.692	Felis_catus
ENSPCIG00000012963	-	99	91.463	ENSFALG00000001912	-	98	91.463	Ficedula_albicollis
ENSPCIG00000012963	-	92	97.619	ENSFDAG00000014026	-	92	97.619	Fukomys_damarensis
ENSPCIG00000012963	-	98	62.696	ENSFDAG00000010713	-	88	62.696	Fukomys_damarensis
ENSPCIG00000012963	-	77	88.259	ENSFHEG00000020125	prpf18	88	88.382	Fundulus_heteroclitus
ENSPCIG00000012963	-	99	79.430	ENSGMOG00000012210	prpf18	92	79.430	Gadus_morhua
ENSPCIG00000012963	-	99	93.354	ENSGALG00000043593	-	93	92.923	Gallus_gallus
ENSPCIG00000012963	-	99	82.595	ENSGAFG00000006034	prpf18	92	82.595	Gambusia_affinis
ENSPCIG00000012963	-	99	82.278	ENSGACG00000012232	prpf18	92	82.278	Gasterosteus_aculeatus
ENSPCIG00000012963	-	99	93.354	ENSGAGG00000016878	-	93	92.923	Gopherus_agassizii
ENSPCIG00000012963	-	100	96.562	ENSGGOG00000025188	-	98	96.562	Gorilla_gorilla
ENSPCIG00000012963	-	99	83.228	ENSHBUG00000010264	prpf18	92	83.228	Haplochromis_burtoni
ENSPCIG00000012963	-	99	96.203	ENSHGLG00000018534	PRPF18	92	96.203	Heterocephalus_glaber_female
ENSPCIG00000012963	-	92	97.959	ENSHGLG00100012161	-	90	97.959	Heterocephalus_glaber_male
ENSPCIG00000012963	-	99	82.911	ENSHCOG00000015987	prpf18	92	82.911	Hippocampus_comes
ENSPCIG00000012963	-	99	80.734	ENSIPUG00000007432	prpf18	93	81.651	Ictalurus_punctatus
ENSPCIG00000012963	-	99	95.570	ENSSTOG00000008735	-	93	95.077	Ictidomys_tridecemlineatus
ENSPCIG00000012963	-	99	69.716	ENSJJAG00000015191	-	91	69.716	Jaculus_jaculus
ENSPCIG00000012963	-	99	96.835	ENSJJAG00000024041	-	92	96.835	Jaculus_jaculus
ENSPCIG00000012963	-	99	82.595	ENSKMAG00000012124	prpf18	92	82.595	Kryptolebias_marmoratus
ENSPCIG00000012963	-	99	80.380	ENSLBEG00000028466	prpf18	92	80.380	Labrus_bergylta
ENSPCIG00000012963	-	99	86.392	ENSLACG00000009885	prpf18	92	86.392	Latimeria_chalumnae
ENSPCIG00000012963	-	99	90.190	ENSLOCG00000016736	prpf18	93	89.231	Lepisosteus_oculatus
ENSPCIG00000012963	-	99	96.835	ENSLAFG00000007753	-	92	96.835	Loxodonta_africana
ENSPCIG00000012963	-	100	96.353	ENSMFAG00000000540	-	99	96.353	Macaca_fascicularis
ENSPCIG00000012963	-	100	96.353	ENSMMUG00000015071	PRPF18	99	96.353	Macaca_mulatta
ENSPCIG00000012963	-	100	96.353	ENSMNEG00000024679	-	99	96.353	Macaca_nemestrina
ENSPCIG00000012963	-	83	95.849	ENSMLEG00000031715	-	91	95.849	Mandrillus_leucophaeus
ENSPCIG00000012963	-	99	82.595	ENSMAMG00000006610	prpf18	92	82.595	Mastacembelus_armatus
ENSPCIG00000012963	-	99	83.228	ENSMZEG00005019392	prpf18	92	83.228	Maylandia_zebra
ENSPCIG00000012963	-	99	93.354	ENSMGAG00000005023	-	92	93.354	Meleagris_gallopavo
ENSPCIG00000012963	-	99	96.519	ENSMICG00000006572	-	98	95.441	Microcebus_murinus
ENSPCIG00000012963	-	99	96.835	ENSMOCG00000021468	Prpf18	92	96.835	Microtus_ochrogaster
ENSPCIG00000012963	-	99	82.911	ENSMMOG00000013012	prpf18	92	82.911	Mola_mola
ENSPCIG00000012963	-	99	85.127	ENSMODG00000024043	-	92	85.127	Monodelphis_domestica
ENSPCIG00000012963	-	99	98.165	ENSMODG00000016902	-	91	98.165	Monodelphis_domestica
ENSPCIG00000012963	-	99	76.250	ENSMALG00000005486	prpf18	92	76.562	Monopterus_albus
ENSPCIG00000012963	-	99	96.203	MGP_CAROLIEiJ_G0023143	Prpf18	100	98.630	Mus_caroli
ENSPCIG00000012963	-	99	95.886	ENSMUSG00000039449	Prpf18	100	98.630	Mus_musculus
ENSPCIG00000012963	-	99	96.519	MGP_PahariEiJ_G0019203	Prpf18	100	98.630	Mus_pahari
ENSPCIG00000012963	-	99	95.570	MGP_SPRETEiJ_G0024061	Prpf18	100	98.630	Mus_spretus
ENSPCIG00000012963	-	99	95.886	ENSMPUG00000000938	-	92	95.886	Mustela_putorius_furo
ENSPCIG00000012963	-	99	95.886	ENSMLUG00000009200	-	92	95.886	Myotis_lucifugus
ENSPCIG00000012963	-	99	96.203	ENSNGAG00000012500	-	92	96.203	Nannospalax_galili
ENSPCIG00000012963	-	64	92.157	ENSNGAG00000023550	-	73	92.157	Nannospalax_galili
ENSPCIG00000012963	-	99	83.228	ENSNBRG00000001778	prpf18	92	83.228	Neolamprologus_brichardi
ENSPCIG00000012963	-	99	96.835	ENSNLEG00000012186	-	93	96.615	Nomascus_leucogenys
ENSPCIG00000012963	-	97	66.667	ENSMEUG00000005032	-	90	66.667	Notamacropus_eugenii
ENSPCIG00000012963	-	83	78.113	ENSOPRG00000002153	-	100	78.113	Ochotona_princeps
ENSPCIG00000012963	-	99	96.519	ENSODEG00000003770	-	92	96.519	Octodon_degus
ENSPCIG00000012963	-	99	83.861	ENSONIG00000014854	prpf18	90	83.861	Oreochromis_niloticus
ENSPCIG00000012963	-	99	96.203	ENSOANG00000015404	-	93	95.692	Ornithorhynchus_anatinus
ENSPCIG00000012963	-	99	96.519	ENSOCUG00000027756	-	88	97.010	Oryctolagus_cuniculus
ENSPCIG00000012963	-	99	82.965	ENSORLG00000010293	prpf18	93	81.231	Oryzias_latipes
ENSPCIG00000012963	-	99	82.911	ENSORLG00020001530	prpf18	92	82.911	Oryzias_latipes_hni
ENSPCIG00000012963	-	99	82.595	ENSORLG00015013705	prpf18	92	82.595	Oryzias_latipes_hsok
ENSPCIG00000012963	-	99	84.494	ENSOMEG00000009167	prpf18	92	84.494	Oryzias_melastigma
ENSPCIG00000012963	-	99	95.886	ENSOGAG00000007294	-	92	95.886	Otolemur_garnettii
ENSPCIG00000012963	-	99	95.692	ENSOARG00000006243	-	93	95.692	Ovis_aries
ENSPCIG00000012963	-	99	96.835	ENSPPAG00000041959	-	93	96.615	Pan_paniscus
ENSPCIG00000012963	-	99	95.886	ENSPPRG00000000107	-	92	95.886	Panthera_pardus
ENSPCIG00000012963	-	99	96.203	ENSPTIG00000021094	-	92	96.203	Panthera_tigris_altaica
ENSPCIG00000012963	-	99	96.835	ENSPTRG00000002306	PRPF18	93	96.615	Pan_troglodytes
ENSPCIG00000012963	-	99	96.519	ENSPANG00000023346	-	93	96.308	Papio_anubis
ENSPCIG00000012963	-	92	98.148	ENSPKIG00000014128	prpf18	89	82.769	Paramormyrops_kingsleyae
ENSPCIG00000012963	-	99	93.354	ENSPSIG00000016064	-	92	93.354	Pelodiscus_sinensis
ENSPCIG00000012963	-	99	77.532	ENSPMGG00000016486	prpf18	92	77.532	Periophthalmus_magnuspinnatus
ENSPCIG00000012963	-	99	96.519	ENSPEMG00000013704	Prpf18	92	96.519	Peromyscus_maniculatus_bairdii
ENSPCIG00000012963	-	100	73.148	ENSPMAG00000000204	prpf18	94	73.148	Petromyzon_marinus
ENSPCIG00000012963	-	99	81.173	ENSPFOG00000017611	prpf18	93	81.173	Poecilia_formosa
ENSPCIG00000012963	-	99	82.595	ENSPLAG00000000369	prpf18	92	82.595	Poecilia_latipinna
ENSPCIG00000012963	-	99	82.595	ENSPMEG00000005183	prpf18	92	82.595	Poecilia_mexicana
ENSPCIG00000012963	-	99	81.962	ENSPREG00000015232	prpf18	92	81.962	Poecilia_reticulata
ENSPCIG00000012963	-	99	96.519	ENSPPYG00000002101	PRPF18	92	96.519	Pongo_abelii
ENSPCIG00000012963	-	99	77.848	ENSPCAG00000010833	-	93	77.848	Procavia_capensis
ENSPCIG00000012963	-	99	89.241	ENSPCOG00000013057	-	92	89.241	Propithecus_coquereli
ENSPCIG00000012963	-	89	62.105	ENSPVAG00000002947	-	83	62.105	Pteropus_vampyrus
ENSPCIG00000012963	-	99	82.911	ENSPNYG00000003554	prpf18	92	82.911	Pundamilia_nyererei
ENSPCIG00000012963	-	99	84.308	ENSPNAG00000023151	prpf18	93	84.308	Pygocentrus_nattereri
ENSPCIG00000012963	-	99	96.519	ENSRNOG00000018396	Prpf18	94	96.000	Rattus_norvegicus
ENSPCIG00000012963	-	99	96.203	ENSRBIG00000028028	-	93	96.000	Rhinopithecus_bieti
ENSPCIG00000012963	-	99	96.519	ENSRROG00000040695	-	93	96.308	Rhinopithecus_roxellana
ENSPCIG00000012963	-	99	96.203	ENSSBOG00000034482	-	97	96.000	Saimiri_boliviensis_boliviensis
ENSPCIG00000012963	-	99	100.000	ENSSHAG00000016463	-	92	100.000	Sarcophilus_harrisii
ENSPCIG00000012963	-	99	78.165	ENSSHAG00000009669	-	92	78.165	Sarcophilus_harrisii
ENSPCIG00000012963	-	83	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSPCIG00000012963	-	99	82.769	ENSSFOG00015022118	prpf18	92	75.389	Scleropages_formosus
ENSPCIG00000012963	-	99	82.278	ENSSMAG00000005308	prpf18	92	82.278	Scophthalmus_maximus
ENSPCIG00000012963	-	99	84.177	ENSSDUG00000015428	prpf18	92	84.177	Seriola_dumerili
ENSPCIG00000012963	-	99	84.177	ENSSLDG00000023989	prpf18	92	84.177	Seriola_lalandi_dorsalis
ENSPCIG00000012963	-	83	75.758	ENSSARG00000005307	-	77	75.758	Sorex_araneus
ENSPCIG00000012963	-	99	93.354	ENSSPUG00000002619	-	92	93.354	Sphenodon_punctatus
ENSPCIG00000012963	-	99	84.494	ENSSPAG00000019502	prpf18	92	84.494	Stegastes_partitus
ENSPCIG00000012963	-	99	96.203	ENSSSCG00000026354	-	93	96.000	Sus_scrofa
ENSPCIG00000012963	-	99	92.722	ENSTGUG00000002286	-	92	92.722	Taeniopygia_guttata
ENSPCIG00000012963	-	99	81.646	ENSTRUG00000011278	prpf18	92	81.646	Takifugu_rubripes
ENSPCIG00000012963	-	99	81.646	ENSTNIG00000000911	prpf18	92	81.646	Tetraodon_nigroviridis
ENSPCIG00000012963	-	77	100.000	ENSTBEG00000013011	-	72	100.000	Tupaia_belangeri
ENSPCIG00000012963	-	99	96.519	ENSTTRG00000011117	PRPF18	92	96.519	Tursiops_truncatus
ENSPCIG00000012963	-	89	98.596	ENSUAMG00000001815	-	85	98.596	Ursus_americanus
ENSPCIG00000012963	-	99	91.139	ENSUMAG00000012329	-	92	91.139	Ursus_maritimus
ENSPCIG00000012963	-	99	90.190	ENSVPAG00000011486	-	92	90.190	Vicugna_pacos
ENSPCIG00000012963	-	99	96.203	ENSVVUG00000005453	-	93	96.000	Vulpes_vulpes
ENSPCIG00000012963	-	99	79.937	ENSXETG00000024057	prpf18	92	79.937	Xenopus_tropicalis
ENSPCIG00000012963	-	99	82.075	ENSXCOG00000020414	prpf18	92	82.075	Xiphophorus_couchianus
ENSPCIG00000012963	-	99	82.595	ENSXMAG00000004713	prpf18	84	82.595	Xiphophorus_maculatus